CsGy6G017260 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G017260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	flowering time control protein FCA isoform X2
Location	Gy14Chr6: 17942476 .. 17957600 (+)
RNA-Seq Expression	CsGy6G017260
Synteny	CsGy6G017260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCTCTATGTGACAGGGCGGGATTCCTCTTTTTGCTCCCGACTCTGACTCCATTTTCTCTTCTTCGCCTCGCTCAAAGATACCGACCGAGTGCTAAGATTTTGGAATTTCTCTTTCACCGTTCTCCAGCAGGACTTTACAAATTTTGGGTATTCGCCTTCTCACTTCCGCAAAGCTGGATAGGCACAGAGGAGACCGCTATGGCCCCGACCAAGATTCCCACCCCTTTCGTCACTCTGCAGCTCCTTCTCGCTTCTCGGACTCCCCCGTGAACCACCACGACACTCGACGGAGTCCCAGCAACTTCCGTGGTGGCGTTGCTGGAGCTAACCGTCGCCCTTTCGACAGCCCTCCTCGATACTCTACTCCCCCTGCTGCTGGGTTTCGCCCGATGGGAACTGCCGGGGGATTCCGTCCAATTCCTGGTCCTGGGGATGGTGGTTTTGGGTCCGGTTTCCAACCGCCACCTGTTGTTGGACAGAAACGGGGTTACCCTTTTGCCGGCCGTGGAAGTTCTCCAGGTTAGGTTAGATTTTGTGGATTAATTCAATTTCTGTTTCTTTTATTTCGTTTATTGATAAGAACATTAGGTAATTTTTTTGCAGTTATTTTTCACGCAACTTTTCGCTTCGTTGATTCTAAATGATTTTTGTGCTTACTTCACCCTTTCGGGCTTTTTTTGAGAGATTATTAAAACTCTATACAATGTCTGAATTATGTTCTTAAAAAAATGAACTTTATTGTTAATGTGAAGTTATATCGATTACTTTGATCATAATTAGCTCCCGTCAGAAGGGGAAAAAACAAAAAAAAGCTTATGGTAACCGTTAGGCATCAATTTGGGGTGGATAGTCTTCTAAAGTCTATTAATGTTTTCTCATTTTCTAGTGATCGTAATTCCACTTTTTATGAGAGGCATTGACCTTTCAGTGTGCTGTCATTTTAGTTATTGAGTGATGAACATTTTGGTGTAAAGATATACTGGGTATAGAAAGCGATAATCTTTCTTTCTTTAGGGTAAAATGGGAAACAACCCTTTAATGCACTCCTTCTGTATCTTTGGCTATTTCATTCATCAATGAAATTGTTTCTAACCCAAAAAAGACAATGTTAACGTATATTGAGAAGAAACACTTACTCTCCTTTCAGTGTGATCAATGTGTGAGATATATTTTTTGTGTAGTTCTCATGTATTTCAGGCAGCACTTAGCTTGCAGCTTGCTAATTTCGTCATCTTCTATCTTCAGATCATTCCGATGGAAGCAATTTTGCCAAGCTATTTGTTGGATCGGTTCCAAGGACAGCCACGGAAGAAATTGTAAGTCTTAAGTATTCATTAAGTTGTTGAAAATCCTCAAAGTCGGTCCTCCACTTGTTCACACTGTATTAACAAAATTGAAGCTAGGCATGTCTAAATTCTTTTATGTTATGAGAAACTCTAGGTTTGTGGGATTTCTTATAGAGATGAAATGCTTTCACATTCTTTTACTTGTATTATAGAATGGGCTCTTGGTGAGTTGGGAGGTTTAAGGAATGGCAGGCATCGAAGCATTATTGTTGCATGACATTCCTATTGGTTCTCTTGTTTTGAGGTGGTGAGAGATTAGGATCATACAAATTGGTGTTTCTCGGAATGTACTTTTAATAAGTTTGAAATTATGCATGGTTTGTTCATGGGTGGAATATGTTGAAGACTTAAGTCAAGTGGGCCCAATAGGGTAAATCTTACAATTTCTATATTTCTCATAGGATCGCCTTTGTTAGGAAAGAGAGAAACATAATTGTTTCTCTTGTTATGGAGGAATGAGGACACTGTCCTTGTTTTCCAAGGATATACACATGTATCAAGAGAGAGAGAGATCCTCCTGCTTTATGAGGTTCCCTATTAACACTTCAATGCTGATGGTCTTGAGCGGTAGTCCATTTATATATAGGATAGGGAGTTGTAGAGGACCATTTCACATTGGAGGAGATAAGGAGGGCAAAGTATTGGTTTTAGGGCTCTATTGCTGTAGATCTTGATGATTAATTTATGGTCCTGGTCCCTTCCCTGCATCCCTTCTCTTCTGGATATTAGAATGCTATGAAATTGGACTTCCTCAAGGTGTTAGGTTGGTTCCATAAGAAGGTATTATGACATTATCGATGTGAAACTTAATGTTACTTACAACTGTTGGGACACAAGCATGGCTGCTGGCAAATTGGCAATTAAAGAAAGTTAAGGAAAGCTACATCCAAGTGCTTATCTTATTTTTTTCTATCAAATAATTTTTCCATTTGATTGTTCGTATACTTTTTAATAGAGTTTGTATCTCATAATTTCAACTACAGAATGGTCTTATCTGACTAATTTATTGAGCTTTCCTCCCTTTCATTTGTTGTTCAAAGGGTTCATTGAAAGGTGTCTCACACCCTCTATTTTGGATATAAGTCCTTTGTGGCTAGCAATGTTTTGTGACCATGGATATATGGTTTGCGAGAAATAGGTTGGATTATAGGGAGTGAGGGAACTTGGAAAAAGATGTTTAGCTCACTTCAATCCCAAGTTTTTATTCCGTGCGACCAATTATTTATGTTGTCACCCTTAAGATCACTAACTCCTGGAGCCAGTGTAATTTTGGGGGCTTCAATTAGTTGCTTTGGCATGTAGATGGATTTCTTTGATTTTTTTATTTTTTGCATGGCCCCACATATTCTTTCATTTTTTTTCAATGAAAGTTGTTATTTAAATTAAAAAAGTAGATGGATTTCTTAGATAAAACTTTGCTTATTTGATACCAGATTCGTCCATTGTTTGAAGAACATGGAAATGTGATTGAAGTAGCTTTGATAAAGGATAAGAGAACAGGCCAACAACAAGGTAAGCATAACTTTCTATTTTGTATGAATCACTTTTGGTTCATACGCATGTGATTTCAGGTTTTGAGAGGCTCGAGGAAATCGTGAGCTCGTCTCAGTTTGTTTTTGCAACAAGTTTGGTGCTTGTTGGTTTTCGTTGCGATCCTAACTTTTTGACCACCATGCCAAACAAGAAGAAGACAAGGCATGTAAACCTGCTATAATATCAAGTTTTGTATGGCAGTGGAGCACAAAAGACCGTGCCTTGGCTGACTAGCTGCAGCAATGAAGGATATAACCCTTTTTTGTTTTCCTTTTGTAATGGGAGTTTCTGCTGCCAGCAGTTTGGGTTTTCTTATGTCAGGATTTATAGTGACAAATGTACAGAATTATTAATTTAGAAAATACACGTTTTTTTATAAAAAAATTATGTTCATATATAATGTAAGTTTGGAAGATATGAATGTGTGTGAGTGTGTGCTTCTTCTTTTCTTTTCTTTTTTAACCCCTTTTTAGTTGTGGTGAATGTTGTTTTTTTCTAAATGGTTTCAAACGTTGGATTGTTATTGGTGTGGAATGTAAAATGGTGATGGGTATGAAGTTGAATCTCCTAGTGGCTTGCGATGGATTTCGTGCAGTGTATATATGGATGGATAGTTGGTAACTGATAGTTTACTTTTGTGATATCCATAGAATGAATGGATGAGTGTCGAGATTTTCGGGCTGCTTGTATGTTTCTCTGAGTAGGTTAAGTTTATTGTGGTATGGAGCACATAGATTGGTTTGTGGCCTTGTTGATCATGTTTTTCATTTTTATCCTTCAAATGAAAGAAGACCCATCATGTCTGATGATAGATGTGGTTTTGTAACAAATTATGTTGTCTCAAGCCAGACTCTTCAGGAGTTCTGCTGCGACATGAAACTCTGCCTTTTTGACCACTTGACCATCCTCTTTTTCCCCACATTTATCTAGTGATGTTTTAAAATTCCCTTTTGTATCTTTGCTGTAGCCTGTAAAAGGAACACTTAGCTCCACTGCTAACTTGTATCTTTTGCTTGTACCCCGTGTTCGTGATTAATTTTATCTGGCTTGCTATTTTTTCATGAATTATGAATTTATGAAAACATTATAGTGTTCAGCACTGATGTTTATCTTCTGTTGTTTGAAGTCTTGATCTTCTCTCCTTCTTGCAGAAGGAGATCCTGTGTGTTGGTTGTGATGTTTGATGATGCTTTTCTCCAGTCCATACAAATATTATTATTATCATGAACACTACCTTATATCAATGTTGCATTGTGGCAGCTGCAGGATAAATCCTCAAACCTTTTTCTTTCTGGAAACAAACAATTTGTAGAACGTATGAAATATTAAGTTCATAGGCGTAGACCATAGGAGTTACGGAACTTTCTTTTGGGGCTTGGATAATTAGTATAGCCTCACTGTAGAATTAGTTTGAGTAACACGATGCTGCTGTCAATGCAATCATGTTGAGTTTCTGAGGATATGTCCTTCAATCTACCTAAAGGCACTGGTGACTGGCGTGCTAAGTGACATTTCTTTTGTTATATATCCCGTGTCAAGTATAGATTTCAATACTTCTGTTGGATGGATACTTGCTGAAGTCCCTGAATTTACACGTTTGGAGCTTCACTCTAACTTGGATGATAGTGTGTCTTCCTATTCAAGTTCTCTGCTTTAGATTGTAGGAGGCAGTATAAGGTCGTTATCAAACCTTTCGGAATTTTATTATGTAAAAATTTTGATACGGTAGAATAATGTAGTTGAGGTGGTTTCTGATGGCTTTACTTAACGTATTTCATGGCTGCATGTAGTCAGTAATCAATATGTACTTTTTTGTGGTTAAATTGCAGCAAGTTCTCGTTTTATTGATTGAGTGAATGTGTTGTTTAATAGATGAAGCTTTCCTTGCTTGTTGGACCACTTTGTTGTATTCTTTGTTGGAAGGTGGGGTGACACTTGGATCATATCGCCTGCCATTGTGAGTTTGCAAGAGCTATGTGGGATTTTTTCTTTCAGACGTTTGGGTTCTCACTTGCTCGACATAGGGGTTCTAATGATTTGAAGGGGGAGTTTCCCCTCCATCTGCATTTTCGTGTTTTTATGGATGAACGGTGTGTGTTGTTTTCTGGGTTTTGTGGGGGAGCATAATAATAGGTTGTTTGGGGGTTAGAGAGGTGATCTTTTGTGGGTTGGTCTCTTGTTAGATATCATGTTTCTCTTTGGGTTGTGGTTTCGAAGTCTTTTTGTAACTCCTCTATAGGCTCTATTTTGTATAGTTGGAGTCCTTTCTTTTAGGGCCTTTCTTTTGGTGGGTTTGTTTTTTTGTATGCCCCTATATTTTCTCAATTTTATCTCGGTGAAAGTTGTTTCTATAAAAGAAAATTATAGGATAGTAGGCTGTTTGATGTCTTTATTATTACTAGCTTAGCTTGCTAAATTAAAGTTTTTAGGACTGGAATATGATATTTTCTTCAAGTTTGTAAATGAGACATTCTCTAGCTAACGGAAGACGGATATTTATGAAATGGAATGGTAAAAGAATTTATCAATGACATTTAAATATAGAGCTTGTGGCTTCTTTCTACCATCATAATCATTGGTATCGAATGGTGGTTGTGGTGGGGGTGCTGATGGATGAAGACAACAATCAATCATATGATTATTTAGGCTGTCATAATGTGCATGTCAGTGTTTTTACTAGCTTATTCTGAATGCTTGATGCTGAGAACTTCTTGATAGCTGGCTTTTCCAACATTTGAACTCTTCCCAGTCTTTTAGTTTCTGTTTCACATAAGATGGTTAATCAGTGGATTTCAATTCCTTGACATTTACATATAGAACCTTACGTGGATGTCTGCTATAGTTTATCTCTACAGTTGTTCTATTTGGATTGAATGAATGGAATTAAAGTTGTGTACTTATATTCTCTGGATGGTTTTAACTGGCTTTTTATCTTTATGAAAGCTGTGGGGTTCTTGGTGTTCTTTACCTACTTCTCCCTGTGTGTTTGTAGATCGCAGTTTGTAACCAACATGACCATCAACATCTATAGATATTAATTTTCCTTCTCCATTTGTGTGTGTGTGTTTGTATCCCTTTCTATTACATTTTCATGATTTTGTAGTAGGCATATTTTTTATAATGGAACTGCAAAGTCGGCCTTTCTGTAGACTATAATGAAATGATAAATGTGGGTGTAGCACCTAATTTTACATGCGACTGTGTTATTACCTCTTCATTTGCCTCGTTATCGTTATATGTAGATGTCTGTTTACCTATCTGTTCACACATAAATGTTATTCCATTATTTAAAAGTTGTGATTCAACGTAGCCCAATCAGAATAGCCTTTACTCATGCAGGATGTTGTTTTGTAAAATATACTACCTCAGAAGAAGCTGATAGAGCAATTAGGAACCTGCACAATCAACATACCCTTCCTGGGGTGAGTTTCTTTTCCCCCAAATATTATTGATATATACCTTGTGTGCAATGCTACTATATGTCTTAAATATGTTTACAGGGAGTGGGCCCGATTCAAGTTAGATATGCTGATGGTGAGCGAGAGCGCCTTGGTAATTGACTCTTCTGGCTTGTCTCTTATTTATTAACCTTCATCAATCCTCACCATCTTCTTTTTTCTTCTTTTCCCCTCATTTTTTTGTGCGCTAGGATGTGGGAAGGGGTTAGAGACAGTACTAAGCTTTGTTATTTTTTAACATTTTGTTGTTACATCTAAGAAATTCAATTTTGAGAATGACAAACAGAAGTTAGACTAAGATGTGAATTTCAATCTGAACATAACATGATTGAAGTATAATGCGAGATAGTTTATTTGGTGGAACTTATCTCTAATACTTAGTATGCGTTTGGGGAAAGGACTATGATAGGCTGTGTTATGATAGTATGCATTTGAGAGAAGGACTATGATAGGTAGTGTTATGATAGTATGTGTTTAGGGGAGGATTGGAGGAGTGAGAAGGATTGGGGAAAAAGTGGAATAGTGAAAAAGAGAGAAAGGAAGGATTATGGAAAACCTAGGATCTACCCTAGGTTTTCCATAATCCTTCCCCCAAACGTAACCCACTCCCCTCCCCCATAGTCCTAGGGCCAAACGCCCCCTTAGCTTTTATTTTTATGAGTGTGAATGAAAAGCTTAAAGAATGATTTAATGGTTCTGGAATTAGGCACACCGACATTCCAAGTCAGGAGAAAGTTGAATCGGTCTGCTATAAAAATTTCCTTTGATCATTTAATTCATTTTTTGCCATACTTAATTTCTGCAGGTGCAGTTGAGTACAAATTGTTTGTTGGTTCACTAAATAAACAAGCTTCAGAAAAAGAAGTCAAGGAAGTATGTCATAACTGTCTGGCTATACCCTTTTTCCCCGATATTACTGTCACATGTTTCTCTTTTTTGAGCCATCAAATAAATTATGAAGTTTGCTATCTGAGTGGAAGTTTATTTTCTTCGCATATTGTCACTTGGTTTTTGGTTGTGGTGGTGTGTATGCCTTGGTCATCTTAGTGCTTCTGCACGGAGTAAGATCTTGTGGGTTACTTCCAGTAGTTCAAGACATTAATCAATATTTTTAATTACAGATCTTTTCTCCCTATGGAGTAGTTGAAGATGTTTATCTAATGCGGGATGAAATGAAACAGAGTCGTGGTATGCTTTTCAAATTTATTTGATCTTGTTTTAAGTGTTACTTTGACAATTAGATATTAATATGAATTTTTGGTCCCTGTTTTTTGTAATGTGGAGAGTGTATGTTGTTAAATGTAAATTATTTAGATGTTGATGCTCTGTTGGCTAGAATTCTTCATTATTTTATATTGGAAGGAGTCATAGACGCTTCGTGCTTAAAATGAATGGATGACTCTCAACTTTGATTCAACGTTTATCAATATGGAAATCTAGGAATTGATTAGTCTCCACTTCCGCAATAACTCTAGTGGAGAAGAAGCGATGGCCATGGGAGACCAACTTTGGCTACTCCATCAGATCGTCAATAACTAACAGAATCTAGGAATTTGATTAAAGGTTTTGTCTGACAAAATTCTAAGAGAGAAGATAAGGGAGGATTAAAAATTAGCTTAGATCTACTAATGTGAGATGAAATAAGAAAACAAGTCTCAATATCTTTTATGATACCATTTGTTTATTTTTTTACTATTATATTTATTTTTATTATTTTAAACGGAAACTTGTAGAGTGTCTTCCAATATCAGTGCAAGATGGATCTTTGGAGTCAAAAGTTGAGAAAATAGAATGTAGTTAATTGAACTGAATAAATTTGCGTCCAGTGGTGGCAATATGATATTATACTATTCTACTTTGCCCATCTTCAGCTATTCACTGCTATGCTAGGCTGTTCAACTATTAGATTCAAAATTTATCATCACGTCATTATTCCTATTGCTACCATTATTTGGTTTTCAGTATATTTCTAATCATGCAATTTAGGGTGTGGATTTGTGAAGTATTCACATAGGGACATGGCACTGGCGGCTATAAATGCTCTTAATGGAATTTTTACAATGAGAGTAAGTCTATGTTCTTGAGTTCATGGTATTTCTTTTTGTTCTGCACACTATTTACTACCAAAGCCTATTACTTAATGAATCTCCTTAACTACAATTAGGGTTGTGATCAACCATTAAGTGTCCGCTTTGCTGACCCAAAGAAGCCCAGACCTGGAGATTCAAGGTTTGATATCATGTAGCTTTATGATCAAATTTTGAAATTGAAATAGATTCTTTGAAGGATTTTCTCCTTTATTTTCTTCTTTTAACATCTTATTCTGAAATTTGGCCCTCACTTCATGTATTTGACACCCTTAACTTCACTTCATGTATTCTCCCTCTCTCCCTCTTCTTCTTCCTCTTTCTCTCTGTCTCTTTTCTCTCTCTCTCAATAAAAAAGTCAATCACTAAAAGCCCTTATAACTTGAGGATCTTGCTTTTTCAGGGGCACTCCTGCATTTGGAGGTCCAGGCTTTGGCTCTCGCTTTCAACCACCTGGGCCAAGGTAAAATTCACTGTGGAAGATACCCATTGTCTTTAGTTCGCGAGGGGTTTGCATGAAGTTGCTTGATATTTCTTATAAAAATAATAAAAAAAGAAAAAGTAAATCCAATCACCAAATTTCATTGCAAATGAGAAAAACAAAAGGTGGGCAATCCTCTAGTAGGGAATAAAAACATTCTCCAACTGGCATTCACCAGAAGTAATCATAGTTGGAAAATGGTTTTAAAAGGGAGCTCCAGTTAGGGGCCACAAATCTGGCAACCTACCAAACATCTTCCTAAATGGCAGGTTTCTTCCCAAAAAAACTTCCCACAGAAAAGCCACAAGTACATGGTCTATAACGTCCTTCTTGAGCCATGGTTCATAGCATGCTATATTACTCCTTGTTTTTGCATTGACTTGACATTTTCTAATCACGCTGTTCATTTTTTGTGCTTTTAGCAGACCAACACCTAATTTTGGTGAATTTATGGGTGATCGAATTCCAATTGATGTACGAGGTTTCAGGCCACCCATTGATGCTGGTATTCATCCCTTTGGGGGTCAGTTGCCACCTAGGTCCAGTGAAATGGGACTACCTTTGAATTTGGTAATTTATTATTACCTTTTGAGTTTGACATATAATTTTGATTGCTATTTATGTAGGCCTACGTAGTAAAAGCAGTATTTTTGGTCATTTCACCCTCTTTAACCGAAGCATATTTGTAACTGGAGAACTCATATGATATTAATATTTTAATACATAGTCAAGAAATCATCAACCTCACAACCTCAAAATTTTCAACTTTCTCACTTATAATAGTTAACGTGTCATTTTATCTCGATGTATTAGGATTCAGGGTTTATAAATTCTTGTATATTATATCATAAGAATTTAAATTTCCATTGTGATAGATCTAATCATTGAAATACTAGGCCAATTCAAAAAACAGAAGTTCTAACGCCCAATTACAGAAGGGGCTCAAATCCAAAGAATTATACTGAACTGATAGTTACAGAAAAAACCATAAACAAACACCCACGAAGGTGAGTTAAACCTAACCACAACCAAAGGTCGACTCTAGACTGCTTGTCTACACAATAAATTCTACTATTCCTCTCAAGCTAAATGTCTCACAACGAGGAAAAAATAAGATTGCCAAAGAACCATTTCTTTGTCCTGAAAAGGAGGATTCAGTAGCTCCTCAAACATGGAACAACGACCTCTATTACAAGCAAGCAGAAGCATAAAGATTCTAAAGAGCCTGTTCTACAAAGATGTAACAAATGCACAATCCTGGAGTAATTGGCCAAGATTCTTTTCCACTCTTAAAATGAGCACACCTTTGACATTAAGGGTGCAACACCATGGAGGAAAGCTTTTGGATACAATCTTGAGTATTCATTCTCCCATGCAAAACTTGGTGGGCAAAAGATTCACTTTCTTAGGAACTTTGACCATTTCAAAGAGAGAAAAATGCAGGGCTCCTGACGAGGAGGGTTGAAACCAAAAGGGCACAATTAAAACTGAGAAAAGGAAGGACTATTAGAGGAAGGCTAGACAAAGGCTACCTAGTGCGAACTTTTCTTCTACCGGTGATAAAGATGAGGGAACGAGGAACTGGGTGGTTATATAGGTATTCGATCCACCCCAATTGAAGATTTCATATGATGAGAGAACAAAGGATAGCTAGCTCAAAGTAGTAGAAAATTAGAGGCTGTTATAAGAAGCCTTAAACTCTTCATCTGAACCCCATTCAAAAGGGAGACATTAAATATGGGAACCTACTTATCGATCATAAAAGAGCAATGGCATGAGGATTTTTTCTAAAAAAGAAAAGAAAAAAAGAAGATACAAATCTTTTTATTAAGAGAATAAAAAGAAACTAGTGCTTTGAGGTACAAAAGCTTACTACAATGTACAAAACATAGCGTAAATAAACACCAACCAAGAGACTTAAAACAAGAAAGAAAAACTTAGGGAGGGTTGATAAACACCAACCAATTGCAGACTGTAGATATCCTGAATTGCATCAAATTTCTTGAAAAGATAACACAGAATATTTTAATCAAGTTGAGTCAATGATGGATGAGAAATGTTGAGAATACTGTTGAAAGATTCAATGATTCCTCTTTGTGTGCCAAGCAAAATCATTAGTGCCATGGGTGCTAGTAATTGTCTTTCTTCATAAAGAATCACGCTGGTGTAAAAATCTCCGGCCCCATTTAACTAACAAAAGCAACATTACTGTGAGTGAAATTCCAATCCCGATGCAGTGACACAAGGACTCTGTGGGCCTTAACTGTATAATCCCATTCCACGTGTTGGATCTTGCCTTAGTCCTGTTTAGATATATAGGTAATTACAAGGAGGCCTCCGATTAGACATAATCAGCTTCAGTGTACATGAAAAAATTCTTACACATTCACAGCCTGCTAAAAACCTGAAAATATGTTTGCAAGGCTCTACTAGAGGACACTGCTGCATCTGGTAGTTCAATAGTCAGTTATATAGTGTAGTTTTGCTAGGGTTCAGGTATTTGCGCCTAATTGGGCTTTCTTTTTCTTAATATTTTCTGATGGTACTGAAAATAATGATAACCTCTTTGGTTATCAAATCATTTGATGTTATGATCATATTTTGGACTTTTCAGTTTGTGAATGATAAAATCAATCATCATCGTGTATGAGTTCAGTTTTAAAATTTCATTTCCTGATCTGGCTTTTCTTTCCGTGGACTATTTTTCATTTCACTCATGATTTTACTTTTAGCAGTACTCTATGGGTATGGATGTACACTGTCTAACGAATGTACCTGCTAACTTTTAGGGTGGTCTTGCTGGTGGGTTTAGAGGTCCCAATCAAGGGTTAGTCAATCCAGCATCTTCAGCTTCTCAACAGGTAACTGGATGCTGATATATGATCTTTTTTTAGGTTACCTGATACATCGTACTCTAGGCTTTCCAAAATATTTCTAATGTCATCTGCATTTGTTAGAATTTTAATCAGTCTGCAAGCCAACATCCACCGCCTGGTCTGCAAGTGTCGCCAGTGTTAAAAACTTCTCAGTCGCCTAAACAATTGCCACCTTCGAATCAATTGCACTCTCATGCCCTTACCTATTCTCAGACACAGACATCTCCAGCATTAGCGCAACAGCATAATCAACCACAAAACTTCAATTCTTCTGGTCAACTGCCCTTTAGTCAGCCTGCACCCTCCCAGGAGTCACCTGGCTTAGGTGGGCAGTTGGCGGTATCTCAGTCTATGGGTGCCTCATCTGCTGCAGCTACACATACTCCTTTGAGTATGAATTTACAATCCCATGCTGCTGCCCCGAGTCAACAGCAACTACCTACGCCAATTCAACCACCTCAGAATTCACCTTCTCAGTTAGCACACATGCTGTCACAACAAAAACAAACTCTACAGGCTAGGTTCCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAACAGCAGTTGCAGCTGATACAACCACCAAATCAAAGTTCAACTTTGCAACCGAGTTCCCAGACTATTAAGCAGCAGGTATTGAGTAATAGCAAGAGGATATCTCTATACTAGTTACTAGTAGAATAAGTTTGGATTTTAAGACATTTTAAACCCCCAATTTCAGGTTAAACATATAATGTCTGTTTGTTTTAAATGCTATTGCAGCCTCATTGGGCAGGGGTTGTGACACATACAGCTGCCAGTGCCGCTTCCGCCACTTCAGATGCACATACATCTACTGTTCCTCCTGCAGCTATAAACACCCAAGTTGTTGCTCCTGTAAAATGCAATTGGACAGAGCACACATCTCCTGATGGCTATAAATACTACTATAACAGTGTTACCGGTGAGAGCAAGGTGAGTTTCATTGAAGGTTCCAACTTTATGAACCTTTGAAGTGATTTTTGTGGTTAGTGTTCTCATGTGTAAACCTGCAGTGGGAGAGACCTGAAGAGCTTTCAGTGATTGAGCAACAACAACAAAAGCCACCAATACTGCAGCCCCATAACCAGCCACATCCTCAACTGCTATCAACCCAGCAACTTTCTCAAACTCCCCAAGCCCAGCTTCAAGCTCAGTTCCAGACACAGTCACAGATGCCCCATCCTCAGCCGCTGCAGCAACCTTCATTCCATTCACAGGCCAGTCTACTTTATTGGCAGTTCCACTTTTCATTGTTGGATTTGAGAGTTCTGGAAATTTTTTCTTCATTTTATTGTTTCACTTTATTATACGACAGTGACTTTTTAGATAATGCAATATCTTTGTTGTATTCTCTTACGATTTCTTCATCTTTTTTTCTTTGGTTTTGCTTGTGGTACCTACGGCCTTTGTTACACTACTACCACTGTGACTTGTTATTCAGCCTGCGTATATTGTAGCTTATTTTATTCTTGTGATGCAGGAAGGTGCATATACACAAATGCAGCCAGCGAATAACTCAATAAATGATCCTACTCGCTTCCATCAGGTACGTTGTTTCTTTTATTTTAATGCAACCAGTTTATTTCTGAGTCAAATTCATGTAATTGATTATGTACCTCAGGGATTTCCCACGACTCAAGAGTGGGCATGGAAGAATAAATAATCAGCAGGTTGGTTTTCTAATTACACGTTGTGTGTGTTCGGTTTGTAAGAGTTGAGTTTGTTAGGGCTGGGATTAGGATGAACATCGTGATATACATGCATGCCCTCACATATACACGTATGTAAAAATCAAATGATGTGTGAAAATTCTAACCTTGAGTTGATATATACTATGCAAAAGACACGAAATGATGTAGTGAACAGGCATGTGGTTCTCCAATTAGTAAGGTTTGGATTCCATATCCTTGTGCTCAACTGTATATAAGAAGAAA

mRNA sequence

CTCTCCTCTATGTGACAGGGCGGGATTCCTCTTTTTGCTCCCGACTCTGACTCCATTTTCTCTTCTTCGCCTCGCTCAAAGATACCGACCGAGTGCTAAGATTTTGGAATTTCTCTTTCACCGTTCTCCAGCAGGACTTTACAAATTTTGGGTATTCGCCTTCTCACTTCCGCAAAGCTGGATAGGCACAGAGGAGACCGCTATGGCCCCGACCAAGATTCCCACCCCTTTCGTCACTCTGCAGCTCCTTCTCGCTTCTCGGACTCCCCCGTGAACCACCACGACACTCGACGGAGTCCCAGCAACTTCCGTGGTGGCGTTGCTGGAGCTAACCGTCGCCCTTTCGACAGCCCTCCTCGATACTCTACTCCCCCTGCTGCTGGGTTTCGCCCGATGGGAACTGCCGGGGGATTCCGTCCAATTCCTGGTCCTGGGGATGGTGGTTTTGGGTCCGGTTTCCAACCGCCACCTGTTGTTGGACAGAAACGGGGTTACCCTTTTGCCGGCCGTGGAAGTTCTCCAGATCATTCCGATGGAAGCAATTTTGCCAAGCTATTTGTTGGATCGGTTCCAAGGACAGCCACGGAAGAAATTATTCGTCCATTGTTTGAAGAACATGGAAATGTGATTGAAGTAGCTTTGATAAAGGATAAGAGAACAGGCCAACAACAAGGATGTTGTTTTGTAAAATATACTACCTCAGAAGAAGCTGATAGAGCAATTAGGAACCTGCACAATCAACATACCCTTCCTGGGGGAGTGGGCCCGATTCAAGTTAGATATGCTGATGGTGAGCGAGAGCGCCTTGGTGCAGTTGAGTACAAATTGTTTGTTGGTTCACTAAATAAACAAGCTTCAGAAAAAGAAGTCAAGGAAATCTTTTCTCCCTATGGAGTAGTTGAAGATGTTTATCTAATGCGGGATGAAATGAAACAGAGTCGTGGGTGTGGATTTGTGAAGTATTCACATAGGGACATGGCACTGGCGGCTATAAATGCTCTTAATGGAATTTTTACAATGAGAGGTTGTGATCAACCATTAAGTGTCCGCTTTGCTGACCCAAAGAAGCCCAGACCTGGAGATTCAAGGGGCACTCCTGCATTTGGAGGTCCAGGCTTTGGCTCTCGCTTTCAACCACCTGGGCCAAGACCAACACCTAATTTTGGTGAATTTATGGGTGATCGAATTCCAATTGATGTACGAGGTTTCAGGCCACCCATTGATGCTGGTATTCATCCCTTTGGGGGTCAGTTGCCACCTAGGTCCAGTGAAATGGGACTACCTTTGAATTTGGGTGGTCTTGCTGGTGGGTTTAGAGGTCCCAATCAAGGGTTAGTCAATCCAGCATCTTCAGCTTCTCAACAGAATTTTAATCAGTCTGCAAGCCAACATCCACCGCCTGGTCTGCAAGTGTCGCCAGTGTTAAAAACTTCTCAGTCGCCTAAACAATTGCCACCTTCGAATCAATTGCACTCTCATGCCCTTACCTATTCTCAGACACAGACATCTCCAGCATTAGCGCAACAGCATAATCAACCACAAAACTTCAATTCTTCTGGTCAACTGCCCTTTAGTCAGCCTGCACCCTCCCAGGAGTCACCTGGCTTAGGTGGGCAGTTGGCGGTATCTCAGTCTATGGGTGCCTCATCTGCTGCAGCTACACATACTCCTTTGAGTATGAATTTACAATCCCATGCTGCTGCCCCGAGTCAACAGCAACTACCTACGCCAATTCAACCACCTCAGAATTCACCTTCTCAGTTAGCACACATGCTGTCACAACAAAAACAAACTCTACAGGCTAGGTTCCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAACAGCAGTTGCAGCTGATACAACCACCAAATCAAAGTTCAACTTTGCAACCGAGTTCCCAGACTATTAAGCAGCAGCCTCATTGGGCAGGGGTTGTGACACATACAGCTGCCAGTGCCGCTTCCGCCACTTCAGATGCACATACATCTACTGTTCCTCCTGCAGCTATAAACACCCAAGTTGTTGCTCCTGTAAAATGCAATTGGACAGAGCACACATCTCCTGATGGCTATAAATACTACTATAACAGTGTTACCGGTGAGAGCAAGTGGGAGAGACCTGAAGAGCTTTCAGTGATTGAGCAACAACAACAAAAGCCACCAATACTGCAGCCCCATAACCAGCCACATCCTCAACTGCTATCAACCCAGCAACTTTCTCAAACTCCCCAAGCCCAGCTTCAAGCTCAGTTCCAGACACAGTCACAGATGCCCCATCCTCAGCCGCTGCAGCAACCTTCATTCCATTCACAGGAAGGTGCATATACACAAATGCAGCCAGCGAATAACTCAATAAATGATCCTACTCGCTTCCATCAGGTACGTTGTTTCTTTTATTTTAATGCAACCAGTTTATTTCTGAGTCAAATTCATGTAATTGATTATGTACCTCAGGGATTTCCCACGACTCAAGAGTGGGCATGGAAGAATAAATAATCAGCAGGTTGGTTTTCTAATTACACGTTGTGTGTGTTCGGTTTGTAAGAGTTGAGTTTGTTAGGGCTGGGATTAGGATGAACATCGTGATATACATGCATGCCCTCACATATACACGTATGTAAAAATCAAATGATGTGTGAAAATTCTAACCTTGAGTTGATATATACTATGCAAAAGACACGAAATGATGTAGTGAACAGGCATGTGGTTCTCCAATTAGTAAGGTTTGGATTCCATATCCTTGTGCTCAACTGTATATAAGAAGAAA

Coding sequence (CDS)

ATGGGAACTGCCGGGGGATTCCGTCCAATTCCTGGTCCTGGGGATGGTGGTTTTGGGTCCGGTTTCCAACCGCCACCTGTTGTTGGACAGAAACGGGGTTACCCTTTTGCCGGCCGTGGAAGTTCTCCAGATCATTCCGATGGAAGCAATTTTGCCAAGCTATTTGTTGGATCGGTTCCAAGGACAGCCACGGAAGAAATTATTCGTCCATTGTTTGAAGAACATGGAAATGTGATTGAAGTAGCTTTGATAAAGGATAAGAGAACAGGCCAACAACAAGGATGTTGTTTTGTAAAATATACTACCTCAGAAGAAGCTGATAGAGCAATTAGGAACCTGCACAATCAACATACCCTTCCTGGGGGAGTGGGCCCGATTCAAGTTAGATATGCTGATGGTGAGCGAGAGCGCCTTGGTGCAGTTGAGTACAAATTGTTTGTTGGTTCACTAAATAAACAAGCTTCAGAAAAAGAAGTCAAGGAAATCTTTTCTCCCTATGGAGTAGTTGAAGATGTTTATCTAATGCGGGATGAAATGAAACAGAGTCGTGGGTGTGGATTTGTGAAGTATTCACATAGGGACATGGCACTGGCGGCTATAAATGCTCTTAATGGAATTTTTACAATGAGAGGTTGTGATCAACCATTAAGTGTCCGCTTTGCTGACCCAAAGAAGCCCAGACCTGGAGATTCAAGGGGCACTCCTGCATTTGGAGGTCCAGGCTTTGGCTCTCGCTTTCAACCACCTGGGCCAAGACCAACACCTAATTTTGGTGAATTTATGGGTGATCGAATTCCAATTGATGTACGAGGTTTCAGGCCACCCATTGATGCTGGTATTCATCCCTTTGGGGGTCAGTTGCCACCTAGGTCCAGTGAAATGGGACTACCTTTGAATTTGGGTGGTCTTGCTGGTGGGTTTAGAGGTCCCAATCAAGGGTTAGTCAATCCAGCATCTTCAGCTTCTCAACAGAATTTTAATCAGTCTGCAAGCCAACATCCACCGCCTGGTCTGCAAGTGTCGCCAGTGTTAAAAACTTCTCAGTCGCCTAAACAATTGCCACCTTCGAATCAATTGCACTCTCATGCCCTTACCTATTCTCAGACACAGACATCTCCAGCATTAGCGCAACAGCATAATCAACCACAAAACTTCAATTCTTCTGGTCAACTGCCCTTTAGTCAGCCTGCACCCTCCCAGGAGTCACCTGGCTTAGGTGGGCAGTTGGCGGTATCTCAGTCTATGGGTGCCTCATCTGCTGCAGCTACACATACTCCTTTGAGTATGAATTTACAATCCCATGCTGCTGCCCCGAGTCAACAGCAACTACCTACGCCAATTCAACCACCTCAGAATTCACCTTCTCAGTTAGCACACATGCTGTCACAACAAAAACAAACTCTACAGGCTAGGTTCCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAACAGCAGTTGCAGCTGATACAACCACCAAATCAAAGTTCAACTTTGCAACCGAGTTCCCAGACTATTAAGCAGCAGCCTCATTGGGCAGGGGTTGTGACACATACAGCTGCCAGTGCCGCTTCCGCCACTTCAGATGCACATACATCTACTGTTCCTCCTGCAGCTATAAACACCCAAGTTGTTGCTCCTGTAAAATGCAATTGGACAGAGCACACATCTCCTGATGGCTATAAATACTACTATAACAGTGTTACCGGTGAGAGCAAGTGGGAGAGACCTGAAGAGCTTTCAGTGATTGAGCAACAACAACAAAAGCCACCAATACTGCAGCCCCATAACCAGCCACATCCTCAACTGCTATCAACCCAGCAACTTTCTCAAACTCCCCAAGCCCAGCTTCAAGCTCAGTTCCAGACACAGTCACAGATGCCCCATCCTCAGCCGCTGCAGCAACCTTCATTCCATTCACAGGAAGGTGCATATACACAAATGCAGCCAGCGAATAACTCAATAAATGATCCTACTCGCTTCCATCAGGTACGTTGTTTCTTTTATTTTAATGCAACCAGTTTATTTCTGAGTCAAATTCATGTAATTGATTATGTACCTCAGGGATTTCCCACGACTCAAGAGTGGGCATGGAAGAATAAATAA

Protein sequence

MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNLGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLHSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSAAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFSQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAINTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHPQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRFHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK*

Homology

[Close]

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot
Match: O04425 (Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 SV=3)

HSP 1 Score: 508.8 bits (1309), Expect = 9.6e-143
Identity = 340/702 (48.43%), Postives = 416/702 (59.26%), Query Frame = 0


Query: 26  PVVGQKRGYPFAGRGS--SPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVAL 85
           P+ GQKRGYP +  GS    D SD S+  KLFVGSVPRTATEE IRP FE+HGNV+EVAL
Sbjct: 92  PLSGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVAL 151

Query: 86  IKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEY 145
           IKDKRTGQQQGCCFVKY TS++ADRAIR LHNQ TLPGG GP+QVRYADGERER+G +E+
Sbjct: 152 IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 211

Query: 146 KLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINAL 205
           KLFVGSLNKQA+EKEV+EIF  +G VEDVYLMRDE +QSRGCGFVKYS ++ A+AAI+ L
Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGL 271

Query: 206 NGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFMGD 265
           NG +TMRGC+QPL VRFA+PK+P+PG+SR      G G G RFQ  GPRPT NFG+  GD
Sbjct: 272 NGTYTMRGCNQPLIVRFAEPKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGD 331

Query: 266 RI------PIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNLGGLAGGFRGPNQGLVNP 325
                   P   R   PP + GI   G    P+  +  LP N GG  GG+  P    +NP
Sbjct: 332 VSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPP---LNP 391

Query: 326 ------ASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLHSHALTYSQTQT 385
                 +SSA+ Q  N++A QH      ++P+ K   SP+ LP   +         QT  
Sbjct: 392 LPVPGVSSSATLQQQNRAAGQH------ITPLKKPLHSPQGLPLPLR--------PQTNF 451

Query: 386 SPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSAAATHTPLSMNL 445
             A A   N    +  S QLP SQ  P Q                 S A A  TPL++NL
Sbjct: 452 PGAQAPLQNP---YAYSSQLPTSQLPPQQ---------------NISRATAPQTPLNINL 511

Query: 446 QSHAAAPSQQQLP-----TPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFSQLQQQL 505
           +    + +  Q P      P+Q  Q+ PS+LA +LSQQ Q+LQA FQSSQQA SQLQQQ+
Sbjct: 512 RPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQV 571

Query: 506 QLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAINTQVVAP 565
           Q +Q PNQ+  L  + +  KQQ  WAG      AS   +T  ++  T  PA   +Q V  
Sbjct: 572 QSMQQPNQNLPLSQNGRAGKQQ--WAGSAIPRVASTTGSTPVSYVQTAAPAV--SQSVGS 631

Query: 566 VKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHPQLLSTQ 625
           VKC WTEHTSPDG+KYYYN +TGESKWE+PEE+ V E++QQK    Q  +Q  P    T 
Sbjct: 632 VKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFEREQQK----QQQHQEKP----TI 691

Query: 626 QLSQTPQAQLQAQFQTQSQMPHPQPLQQP---SFHSQEGA-----YTQMQPANNSINDPT 685
           Q SQT    LQ Q Q   Q    Q LQQP   S +   GA     Y  +    NS    +
Sbjct: 692 QQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYPTPGASHNTQYPSLPVGQNSQFPMS 746

Query: 686 RFHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 701
              Q    +      +  + ++ I    Q   + QE  WKNK
Sbjct: 752 GIGQNAQDYARTHIPVGAASMNDISRTQQSRQSPQELMWKNK 746

[Close]

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot
Match: B8BCZ8 (Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA PE=3 SV=2)

HSP 1 Score: 451.8 bits (1161), Expect = 1.4e-125
Identity = 321/691 (46.45%), Postives = 399/691 (57.74%), Query Frame = 0


Query: 2   GTAGGFRPIPGPGD----GGF---GSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKL 61
           G  G F P  GP D    GG+   G G    P  G +  Y  +GRG   DH + +N+ KL
Sbjct: 66  GGGGRFHPYRGPSDHSGGGGYRSGGGGEYGEPGSGPRHRYG-SGRGDHSDHDNRNNYVKL 125

Query: 62  FVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLH 121
           F+GSVPRTATE+ +RPLFEEHG+V+EVALIKD++TG+QQGCCFVKY TSEEA+RAIR LH
Sbjct: 126 FIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALH 185

Query: 122 NQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYL 181
           NQ+TLPG +GPIQVRYADGERER GA+E+KLFV SLNKQA+ KE++EIF+PYG VEDVY+
Sbjct: 186 NQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYI 245

Query: 182 MRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGT 241
           M+D M+QSRGCGFVK+S R+ ALAA++AL+G + MRGC+QPL +RFADPK+PRPG+SRG 
Sbjct: 246 MKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGG 305

Query: 242 PAFGGPGFGSRFQPP-GPRPTPNFGEFMGDRIPIDVRGFRPPIDA--GIHPFGGQLP--P 301
           PAFGGPGF  R       RPT N  E  G  +P D      P  A    + FG   P  P
Sbjct: 306 PAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAP 365

Query: 302 RSSEMGLPLNLGGLAGGFRGPNQGLVN----PASSASQQNFNQSASQHPPPGLQVSPVLK 361
           + S +    +           N  L +    P+SS    N    A  H   G Q+ P+ K
Sbjct: 366 KGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNPPPMAQGHHLGGQQIPPLQK 425

Query: 362 TSQSPKQLPPSNQLHSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGL 421
               P+  P   Q         Q Q     AQQ  Q Q   S G   F Q         L
Sbjct: 426 LPGLPQNFPVQLQ------NNQQGQPLQGPAQQIGQLQVPQSMGPGSFGQNM-------L 485

Query: 422 GGQLAVSQSMGASSAA--ATHTPLSMNLQSHAAAPSQQQLPTPI------QPPQNSPSQL 481
            GQL VSQ +   +A+  A   P +++  S  A P QQ LP+ +      QP Q  PSQ 
Sbjct: 486 SGQLPVSQPLMQQNASVGAVQAPSAVS-NSMQAIPGQQHLPSNVAPQMLQQPVQQMPSQA 545

Query: 482 AHMLSQQKQTLQARFQSSQQAFSQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTH 541
             +L QQ+  LQ+ +QSSQQA  QLQQQLQL+Q   QS+          QQP     V  
Sbjct: 546 PQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNH-------QQPTQGQPVQS 605

Query: 542 TAASAASATSDAHTSTVPPAAINTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPE 601
           +   A +A   ++ +T+P  A  T    P+ CNWTEHTSP+G+KYYYNS+T ESKW++PE
Sbjct: 606 SNPGAPNAIIPSNINTIPQQA--TSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPE 665

Query: 602 ELSVIE-----QQQQKPPILQPHNQPHPQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQP- 661
           E  + E     QQQQK  +LQ H Q     L+ QQL   PQAQ     Q   Q+P  Q  
Sbjct: 666 EYVLYEQQQQQQQQQKLLLLQQHQQK----LAMQQLQSPPQAQTHPAMQPVQQIPQAQQG 725

Query: 662 LQQPSFHSQEGAYTQMQPANNSINDPTRFHQ 663
            QQ     QE  YTQ+Q       DP+R  Q
Sbjct: 726 QQQMQMKQQELNYTQLQ--TPGAIDPSRIQQ 726

[Close]

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot
Match: Q6K271 (Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=FCA PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.8e-125
Identity = 323/691 (46.74%), Postives = 403/691 (58.32%), Query Frame = 0


Query: 2   GTAGGFRPIPGPGD----GGF---GSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKL 61
           G  G F P  GP D    GG+   G G    P  G +  Y  +GRG   DH + +N+ KL
Sbjct: 66  GGGGRFHPYRGPSDHSGGGGYRSGGGGEYGEPGSGPRHRYG-SGRGDHSDHDNRNNYVKL 125

Query: 62  FVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLH 121
           F+GSVPRTATE+ +RPLFEEHG+V+EVALIKD++TG+QQGCCFVKY TSEEA+RAIR LH
Sbjct: 126 FIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALH 185

Query: 122 NQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYL 181
           NQ+TLPG +GPIQVRYADGERER GA+E+KLFV SLNKQA+ KE++EIF+PYG VEDVY+
Sbjct: 186 NQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYI 245

Query: 182 MRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGT 241
           M+D M+QSRGCGFVK+S R+ ALAA++AL+G + MRGC+QPL +RFADPK+PRPG+SRG 
Sbjct: 246 MKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGG 305

Query: 242 PAFGGPGFGSRFQPP-GPRPTPNFGEFMGDRIPIDVRGFRPPIDA--GIHPFGGQLP--P 301
           PAFGGPGF  R       RPT N  E  G  +P D      P  A    + FG   P  P
Sbjct: 306 PAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAP 365

Query: 302 RSSEMGLPLNLGGLAGGFRGPNQGLVN----PASSASQQNFNQSASQHPPPGLQVSPVLK 361
           + S +    +           N  L +    P+SS    N    A  H   G Q+ P+ K
Sbjct: 366 KGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNPPPMAQGHHLGGQQIPPLQK 425

Query: 362 TSQSPKQLPPSNQLHSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGL 421
               P+  P   QL ++ L   Q    P  AQQ  Q Q   S G   F Q         L
Sbjct: 426 LPGLPQNFPV--QLQNNQL--GQPLQGP--AQQIGQLQVPQSMGPGSFGQNR-------L 485

Query: 422 GGQLAVSQSM--GASSAAATHTPLSMNLQSHAAAPSQQQLPTPI------QPPQNSPSQL 481
            GQL VSQ +    +S +A   P +++  S  A P QQ LP+ +      QP Q  PSQ 
Sbjct: 486 SGQLPVSQPLMQQNASVSAVQVPSAVS-NSMQAIPGQQHLPSNVAPQMLQQPVQQMPSQA 545

Query: 482 AHMLSQQKQTLQARFQSSQQAFSQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTH 541
             +L QQ+  LQ+ +QSSQQA  QLQQQLQL+Q   QS+          QQP     V  
Sbjct: 546 PQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNH-------QQPTQGQPVQS 605

Query: 542 TAASAASATSDAHTSTVPPAAINTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPE 601
           +   A +A   ++ +T+P  A  T    P+ CNWTEHTSP+G+KYYYNS+T ESKW++PE
Sbjct: 606 SNPGAPNAIIPSNINTIPQQA--TSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPE 665

Query: 602 ELSVIE-----QQQQKPPILQPHNQPHPQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQP- 661
           E  + E     QQQQK  +LQ H Q     L+ QQL   PQAQ     Q   Q+P  Q  
Sbjct: 666 EYVLYEQQQQQQQQQKLLLLQQHQQK----LAMQQLQSPPQAQTHPAMQPVQQIPQAQQG 725

Query: 662 LQQPSFHSQEGAYTQMQPANNSINDPTRFHQ 663
            QQ     QE  YTQ+Q       DP+R  Q
Sbjct: 726 QQQMQMKQQELNYTQLQ--TPGAIDPSRIQQ 726

[Close]

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot
Match: Q8GZ26 (RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-39
Identity = 111/309 (35.92%), Postives = 158/309 (51.13%), Query Frame = 0


Query: 53  KLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRN 112
           KLFVG VP+  TE  +  LF E   V EV +IK+K T   +GCCF+   T E+AD+ I +
Sbjct: 13  KLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVINS 72

Query: 113 LHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDV 172
            HN+ TLPG   P+QV+YADGE ERL   E+KLFVG L K  SE EV+ +FS YG ++D+
Sbjct: 73  FHNKKTLPGASSPLQVKYADGELERL---EHKLFVGMLPKNVSETEVQSLFSEYGTIKDL 132

Query: 173 YLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSR 232
            ++R  ++ S+GC F+KY  ++ A+AA+ ALNG   M G + PL V++AD +K R    +
Sbjct: 133 QILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER----Q 192

Query: 233 GTPAFGGPGFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDA-GIH---PFGGQLP 292
                      SR  P  P         M   +P+    + PP +  G H    +G  LP
Sbjct: 193 ARRLLKVQSHVSRLDPQNPS--------MFGALPM---SYVPPYNGYGYHVPGTYGYMLP 252

Query: 293 PRSSEMGLPLNLGGLAGGFRGPNQGLVN---PASSASQQNFNQSASQHPPPGLQVSPVLK 352
           P  ++      +    G  R      +    P   A ++NF  +   +   GLQ      
Sbjct: 253 PIQTQHAFHNVISPNQGNGRALQGTALTESVPPRLAPRRNFPTALGNYGYHGLQYPMAFP 303

Query: 353 TSQSPKQLP 355
               P +LP
Sbjct: 313 RGMIPPRLP 303

[Close]

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot
Match: Q8LFS6 (RNA-binding protein BRN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.9e-38
Identity = 78/175 (44.57%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 53  KLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRN 112
           KLFVG +P+  +E  +  LF+E   V EV +IKDK T   +GCCF+   + EEAD+ +  
Sbjct: 19  KLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNA 78

Query: 113 LHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDV 172
            HN+ TLPG    +QV+YADGE ERL   E+KLFVG L K  SE EV+ +FS YG ++D+
Sbjct: 79  CHNKKTLPGANSLLQVKYADGELERL---EHKLFVGMLPKNVSEAEVQSLFSKYGTIKDL 138

Query: 173 YLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPR 228
            ++R   + S+GC F+KY  ++ A++A+ ++NG   M G   PL V++AD ++ R
Sbjct: 139 QILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERER 190

[Close]

BLAST of CsGy6G017260 vs. NCBI nr
Match: XP_004148821.1 (flowering time control protein FCA isoform X2 [Cucumis sativus] >KGN47451.1 hypothetical protein Csa_021780 [Cucumis sativus])

HSP 1 Score: 1303 bits (3372), Expect = 0.0
Identity = 674/700 (96.29%), Postives = 674/700 (96.29%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN
Sbjct: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQAQLQ QFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF
Sbjct: 601 QLLSTQQLSQTPQAQLQTQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFPTTQEWAWKNK
Sbjct: 661 HQ-------------------------GFPTTQEWAWKNK 675

[Close]

BLAST of CsGy6G017260 vs. NCBI nr
Match: XP_031742925.1 (flowering time control protein FCA isoform X1 [Cucumis sativus])

HSP 1 Score: 1298 bits (3360), Expect = 0.0
Identity = 674/701 (96.15%), Postives = 674/701 (96.15%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGP-RPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN 300
           GFGSRFQPPGP RPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN
Sbjct: 241 GFGSRFQPPGPSRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN 300

Query: 301 LGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360
           LGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL
Sbjct: 301 LGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360

Query: 361 HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420
           HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS
Sbjct: 361 HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420

Query: 421 AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480
           AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF
Sbjct: 421 AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480

Query: 481 SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI 540
           SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI
Sbjct: 481 SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI 540

Query: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600
           NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH
Sbjct: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600

Query: 601 PQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR 660
           PQLLSTQQLSQTPQAQLQ QFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR
Sbjct: 601 PQLLSTQQLSQTPQAQLQTQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR 660

Query: 661 FHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           FHQ                         GFPTTQEWAWKNK
Sbjct: 661 FHQ-------------------------GFPTTQEWAWKNK 676

[Close]

BLAST of CsGy6G017260 vs. NCBI nr
Match: XP_031742926.1 (flowering time control protein FCA isoform X3 [Cucumis sativus])

HSP 1 Score: 1284 bits (3322), Expect = 0.0
Identity = 670/701 (95.58%), Postives = 670/701 (95.58%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGP-RPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN 300
           GFGSRFQPPGP RPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN
Sbjct: 241 GFGSRFQPPGPSRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN 300

Query: 301 LGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360
           LGGLAGGFRGPNQGLVNPASSASQQ    SASQHPPPGLQVSPVLKTSQSPKQLPPSNQL
Sbjct: 301 LGGLAGGFRGPNQGLVNPASSASQQ----SASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360

Query: 361 HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420
           HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS
Sbjct: 361 HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420

Query: 421 AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480
           AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF
Sbjct: 421 AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480

Query: 481 SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI 540
           SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI
Sbjct: 481 SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI 540

Query: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600
           NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH
Sbjct: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600

Query: 601 PQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR 660
           PQLLSTQQLSQTPQAQLQ QFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR
Sbjct: 601 PQLLSTQQLSQTPQAQLQTQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR 660

Query: 661 FHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           FHQ                         GFPTTQEWAWKNK
Sbjct: 661 FHQ-------------------------GFPTTQEWAWKNK 672

[Close]

BLAST of CsGy6G017260 vs. NCBI nr
Match: XP_008458335.1 (PREDICTED: flowering time control protein FCA isoform X2 [Cucumis melo])

HSP 1 Score: 1258 bits (3254), Expect = 0.0
Identity = 652/700 (93.14%), Postives = 654/700 (93.43%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLNL 300

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GG AGGFRGPNQGL NPA SASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 301 GGPAGGFRGPNQGLANPAPSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 361 SHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 421 AATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA N
Sbjct: 481 QLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAARN 540

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTRF
Sbjct: 601 QLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTRF 660

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFP TQEWAWKNK
Sbjct: 661 HQ-------------------------GFPATQEWAWKNK 675

[Close]

BLAST of CsGy6G017260 vs. NCBI nr
Match: TYK02963.1 (flowering time control protein FCA isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1258 bits (3254), Expect = 0.0
Identity = 652/700 (93.14%), Postives = 654/700 (93.43%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 108 MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 167

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 168 RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 227

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 228 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 287

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 288 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 347

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 348 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLNL 407

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GG AGGFRGPNQGL NPA SASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 408 GGPAGGFRGPNQGLANPAPSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 467

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 468 SHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 527

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 528 AATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 587

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA N
Sbjct: 588 QLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAARN 647

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 648 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 707

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTRF
Sbjct: 708 QLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTRF 767

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFP TQEWAWKNK
Sbjct: 768 HQ-------------------------GFPATQEWAWKNK 782

[Close]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL
Match: A0A0A0KI53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G326920 PE=4 SV=1)

HSP 1 Score: 1303 bits (3372), Expect = 0.0
Identity = 674/700 (96.29%), Postives = 674/700 (96.29%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN
Sbjct: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQAQLQ QFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF
Sbjct: 601 QLLSTQQLSQTPQAQLQTQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFPTTQEWAWKNK
Sbjct: 661 HQ-------------------------GFPTTQEWAWKNK 675

[Close]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL
Match: A0A5D3BTH3 (Flowering time control protein FCA isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00470 PE=4 SV=1)

HSP 1 Score: 1258 bits (3254), Expect = 0.0
Identity = 652/700 (93.14%), Postives = 654/700 (93.43%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 108 MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 167

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 168 RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 227

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 228 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 287

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 288 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 347

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 348 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLNL 407

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GG AGGFRGPNQGL NPA SASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 408 GGPAGGFRGPNQGLANPAPSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 467

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 468 SHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 527

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 528 AATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 587

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA N
Sbjct: 588 QLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAARN 647

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 648 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 707

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTRF
Sbjct: 708 QLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTRF 767

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFP TQEWAWKNK
Sbjct: 768 HQ-------------------------GFPATQEWAWKNK 782

[Close]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL
Match: A0A1S3C7R1 (flowering time control protein FCA isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497779 PE=4 SV=1)

HSP 1 Score: 1258 bits (3254), Expect = 0.0
Identity = 652/700 (93.14%), Postives = 654/700 (93.43%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLNL 300

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GG AGGFRGPNQGL NPA SASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 301 GGPAGGFRGPNQGLANPAPSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 361 SHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 421 AATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA N
Sbjct: 481 QLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAARN 540

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTRF
Sbjct: 601 QLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTRF 660

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFP TQEWAWKNK
Sbjct: 661 HQ-------------------------GFPATQEWAWKNK 675

[Close]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL
Match: A0A1S3C756 (flowering time control protein FCA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497779 PE=4 SV=1)

HSP 1 Score: 1253 bits (3242), Expect = 0.0
Identity = 652/701 (93.01%), Postives = 654/701 (93.30%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGP-RPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLN 300
           GFGSRFQPPGP RPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLN
Sbjct: 241 GFGSRFQPPGPSRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLN 300

Query: 301 LGGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360
           LGG AGGFRGPNQGL NPA SASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL
Sbjct: 301 LGGPAGGFRGPNQGLANPAPSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQL 360

Query: 361 HSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420
           HSHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS
Sbjct: 361 HSHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASS 420

Query: 421 AAATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480
           AAATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF
Sbjct: 421 AAATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAF 480

Query: 481 SQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAI 540
           SQLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA 
Sbjct: 481 SQLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAAR 540

Query: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600
           NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH
Sbjct: 541 NTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPH 600

Query: 601 PQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTR 660
           PQLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTR
Sbjct: 601 PQLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTR 660

Query: 661 FHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           FHQ                         GFP TQEWAWKNK
Sbjct: 661 FHQ-------------------------GFPATQEWAWKNK 676

[Close]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL
Match: A0A1S3C885 (flowering time control protein FCA isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497779 PE=4 SV=1)

HSP 1 Score: 1243 bits (3216), Expect = 0.0
Identity = 648/700 (92.57%), Postives = 650/700 (92.86%), Query Frame = 0


Query: 1   MGTAGGFRPIPGPGDGGFGSGFQPPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60
           MGTAGGFRPIPGPG GGFGSGFQ PPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP
Sbjct: 1   MGTAGGFRPIPGPGGGGFGSGFQAPPVVGQKRGYPFAGRGSSPDHSDGSNFAKLFVGSVP 60

Query: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120
           RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP
Sbjct: 61  RTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLP 120

Query: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180
           GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK
Sbjct: 121 GGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMK 180

Query: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240
           QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP
Sbjct: 181 QSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGP 240

Query: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNL 300
           GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPP+DAGIHPFGGQLPPRSSEMGLPLNL
Sbjct: 241 GFGSRFQPPGPRPTPNFGEFMGDRIPIDVRGFRPPVDAGIHPFGGQLPPRSSEMGLPLNL 300

Query: 301 GGLAGGFRGPNQGLVNPASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360
           GG AGGFRGPNQGL NPA SASQQ    SASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH
Sbjct: 301 GGPAGGFRGPNQGLANPAPSASQQ----SASQHPPPGLQVSPVLKTSQSPKQLPPSNQLH 360

Query: 361 SHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420
           SHA  YSQT TSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA
Sbjct: 361 SHAPAYSQTHTSPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSA 420

Query: 421 AATHTPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480
           AATH PLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS
Sbjct: 421 AATHAPLSMNLQSHAAAPSQQQLPTPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFS 480

Query: 481 QLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAIN 540
           QLQQQLQ IQPPNQSSTLQPSSQ IKQQPHWAGV  HTAASA SATSDAHTSTVPPAA N
Sbjct: 481 QLQQQLQQIQPPNQSSTLQPSSQPIKQQPHWAGVGPHTAASATSATSDAHTSTVPPAARN 540

Query: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600
           TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP
Sbjct: 541 TQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHP 600

Query: 601 QLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQPSFHSQEGAYTQMQPANNSINDPTRF 660
           QLLSTQQLSQTPQ QLQ QFQTQS MPHPQPL QPSFHSQEGAYTQMQP NNS+NDPTRF
Sbjct: 601 QLLSTQQLSQTPQPQLQTQFQTQSPMPHPQPLLQPSFHSQEGAYTQMQPTNNSVNDPTRF 660

Query: 661 HQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 700
           HQ                         GFP TQEWAWKNK
Sbjct: 661 HQ-------------------------GFPATQEWAWKNK 671

[Close]

BLAST of CsGy6G017260 vs. TAIR 10
Match: AT4G16280.2 (RNA binding;abscisic acid binding )

HSP 1 Score: 508.8 bits (1309), Expect = 6.8e-144
Identity = 340/702 (48.43%), Postives = 416/702 (59.26%), Query Frame = 0


Query: 26  PVVGQKRGYPFAGRGS--SPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVAL 85
           P+ GQKRGYP +  GS    D SD S+  KLFVGSVPRTATEE IRP FE+HGNV+EVAL
Sbjct: 92  PLSGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVAL 151

Query: 86  IKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEY 145
           IKDKRTGQQQGCCFVKY TS++ADRAIR LHNQ TLPGG GP+QVRYADGERER+G +E+
Sbjct: 152 IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 211

Query: 146 KLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINAL 205
           KLFVGSLNKQA+EKEV+EIF  +G VEDVYLMRDE +QSRGCGFVKYS ++ A+AAI+ L
Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGL 271

Query: 206 NGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFMGD 265
           NG +TMRGC+QPL VRFA+PK+P+PG+SR      G G G RFQ  GPRPT NFG+  GD
Sbjct: 272 NGTYTMRGCNQPLIVRFAEPKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGD 331

Query: 266 RI------PIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNLGGLAGGFRGPNQGLVNP 325
                   P   R   PP + GI   G    P+  +  LP N GG  GG+  P    +NP
Sbjct: 332 VSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPP---LNP 391

Query: 326 ------ASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLHSHALTYSQTQT 385
                 +SSA+ Q  N++A QH      ++P+ K   SP+ LP   +         QT  
Sbjct: 392 LPVPGVSSSATLQQQNRAAGQH------ITPLKKPLHSPQGLPLPLR--------PQTNF 451

Query: 386 SPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSAAATHTPLSMNL 445
             A A   N    +  S QLP SQ  P Q                 S A A  TPL++NL
Sbjct: 452 PGAQAPLQNP---YAYSSQLPTSQLPPQQ---------------NISRATAPQTPLNINL 511

Query: 446 QSHAAAPSQQQLP-----TPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFSQLQQQL 505
           +    + +  Q P      P+Q  Q+ PS+LA +LSQQ Q+LQA FQSSQQA SQLQQQ+
Sbjct: 512 RPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQV 571

Query: 506 QLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAINTQVVAP 565
           Q +Q PNQ+  L  + +  KQQ  WAG      AS   +T  ++  T  PA   +Q V  
Sbjct: 572 QSMQQPNQNLPLSQNGRAGKQQ--WAGSAIPRVASTTGSTPVSYVQTAAPAV--SQSVGS 631

Query: 566 VKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHPQLLSTQ 625
           VKC WTEHTSPDG+KYYYN +TGESKWE+PEE+ V E++QQK    Q  +Q  P    T 
Sbjct: 632 VKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFEREQQK----QQQHQEKP----TI 691

Query: 626 QLSQTPQAQLQAQFQTQSQMPHPQPLQQP---SFHSQEGA-----YTQMQPANNSINDPT 685
           Q SQT    LQ Q Q   Q    Q LQQP   S +   GA     Y  +    NS    +
Sbjct: 692 QQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYPTPGASHNTQYPSLPVGQNSQFPMS 746

Query: 686 RFHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 701
              Q    +      +  + ++ I    Q   + QE  WKNK
Sbjct: 752 GIGQNAQDYARTHIPVGAASMNDISRTQQSRQSPQELMWKNK 746

[Close]

BLAST of CsGy6G017260 vs. TAIR 10
Match: AT4G16280.4 (RNA binding;abscisic acid binding )

HSP 1 Score: 508.8 bits (1309), Expect = 6.8e-144
Identity = 340/702 (48.43%), Postives = 416/702 (59.26%), Query Frame = 0


Query: 26  PVVGQKRGYPFAGRGS--SPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVAL 85
           P+ GQKRGYP +  GS    D SD S+  KLFVGSVPRTATEE IRP FE+HGNV+EVAL
Sbjct: 17  PLSGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVAL 76

Query: 86  IKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEY 145
           IKDKRTGQQQGCCFVKY TS++ADRAIR LHNQ TLPGG GP+QVRYADGERER+G +E+
Sbjct: 77  IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 136

Query: 146 KLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINAL 205
           KLFVGSLNKQA+EKEV+EIF  +G VEDVYLMRDE +QSRGCGFVKYS ++ A+AAI+ L
Sbjct: 137 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGL 196

Query: 206 NGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFMGD 265
           NG +TMRGC+QPL VRFA+PK+P+PG+SR      G G G RFQ  GPRPT NFG+  GD
Sbjct: 197 NGTYTMRGCNQPLIVRFAEPKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGD 256

Query: 266 RI------PIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNLGGLAGGFRGPNQGLVNP 325
                   P   R   PP + GI   G    P+  +  LP N GG  GG+  P    +NP
Sbjct: 257 VSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPP---LNP 316

Query: 326 ------ASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLHSHALTYSQTQT 385
                 +SSA+ Q  N++A QH      ++P+ K   SP+ LP   +         QT  
Sbjct: 317 LPVPGVSSSATLQQQNRAAGQH------ITPLKKPLHSPQGLPLPLR--------PQTNF 376

Query: 386 SPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSAAATHTPLSMNL 445
             A A   N    +  S QLP SQ  P Q                 S A A  TPL++NL
Sbjct: 377 PGAQAPLQNP---YAYSSQLPTSQLPPQQ---------------NISRATAPQTPLNINL 436

Query: 446 QSHAAAPSQQQLP-----TPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFSQLQQQL 505
           +    + +  Q P      P+Q  Q+ PS+LA +LSQQ Q+LQA FQSSQQA SQLQQQ+
Sbjct: 437 RPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQV 496

Query: 506 QLIQPPNQSSTLQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAINTQVVAP 565
           Q +Q PNQ+  L  + +  KQQ  WAG      AS   +T  ++  T  PA   +Q V  
Sbjct: 497 QSMQQPNQNLPLSQNGRAGKQQ--WAGSAIPRVASTTGSTPVSYVQTAAPAV--SQSVGS 556

Query: 566 VKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHPQLLSTQ 625
           VKC WTEHTSPDG+KYYYN +TGESKWE+PEE+ V E++QQK    Q  +Q  P    T 
Sbjct: 557 VKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFEREQQK----QQQHQEKP----TI 616

Query: 626 QLSQTPQAQLQAQFQTQSQMPHPQPLQQP---SFHSQEGA-----YTQMQPANNSINDPT 685
           Q SQT    LQ Q Q   Q    Q LQQP   S +   GA     Y  +    NS    +
Sbjct: 617 QQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYPTPGASHNTQYPSLPVGQNSQFPMS 671

Query: 686 RFHQVRCFFYFNATSLFLSQIHVIDYVPQGFPTTQEWAWKNK 701
              Q    +      +  + ++ I    Q   + QE  WKNK
Sbjct: 677 GIGQNAQDYARTHIPVGAASMNDISRTQQSRQSPQELMWKNK 671

[Close]

BLAST of CsGy6G017260 vs. TAIR 10
Match: AT4G16280.3 (RNA binding;abscisic acid binding )

HSP 1 Score: 410.2 bits (1053), Expect = 3.3e-114
Identity = 253/477 (53.04%), Postives = 304/477 (63.73%), Query Frame = 0


Query: 26  PVVGQKRGYPFAGRGS--SPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVAL 85
           P+ GQKRGYP +  GS    D SD S+  KLFVGSVPRTATEE IRP FE+HGNV+EVAL
Sbjct: 92  PLSGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVAL 151

Query: 86  IKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEY 145
           IKDKRTGQQQGCCFVKY TS++ADRAIR LHNQ TLPGG GP+QVRYADGERER+G +E+
Sbjct: 152 IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 211

Query: 146 KLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINAL 205
           KLFVGSLNKQA+EKEV+EIF  +G VEDVYLMRDE +QSRGCGFVKYS ++ A+AAI+ L
Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGL 271

Query: 206 NGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFMGD 265
           NG +TMRGC+QPL VRFA+PK+P+PG+SR      G G G RFQ  GPRPT NFG+  GD
Sbjct: 272 NGTYTMRGCNQPLIVRFAEPKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGD 331

Query: 266 RI------PIDVRGFRPPIDAGIHPFGGQLPPRSSEMGLPLNLGGLAGGFRGPNQGLVNP 325
                   P   R   PP + GI   G    P+  +  LP N GG  GG+  P    +NP
Sbjct: 332 VSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPP---LNP 391

Query: 326 ------ASSASQQNFNQSASQHPPPGLQVSPVLKTSQSPKQLPPSNQLHSHALTYSQTQT 385
                 +SSA+ Q  N++A QH      ++P+ K   SP+ LP   +         QT  
Sbjct: 392 LPVPGVSSSATLQQQNRAAGQH------ITPLKKPLHSPQGLPLPLR--------PQTNF 451

Query: 386 SPALAQQHNQPQNFNSSGQLPFSQPAPSQESPGLGGQLAVSQSMGASSAAATHTPLSMNL 445
             A A   N    +  S QLP SQ  P Q                 S A A  TPL++NL
Sbjct: 452 PGAQAPLQNP---YAYSSQLPTSQLPPQQ---------------NISRATAPQTPLNINL 511

Query: 446 QSHAAAPSQQQLP-----TPIQPPQNSPSQLAHMLSQQKQTLQARFQSSQQAFSQLQ 484
           +    + +  Q P      P+Q  Q+ PS+LA +LSQQ Q+LQA FQSSQQA SQLQ
Sbjct: 512 RPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQ 533

[Close]

BLAST of CsGy6G017260 vs. TAIR 10
Match: AT4G16280.1 (RNA binding;abscisic acid binding )

HSP 1 Score: 280.0 bits (715), Expect = 5.1e-75
Identity = 225/551 (40.83%), Postives = 287/551 (52.09%), Query Frame = 0


Query: 175 MRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGT 234
           MRDE +QSRGCGFVKYS ++ A+AAI+ LNG +TMRGC+QPL VRFA+PK+P+PG+SR  
Sbjct: 1   MRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPKPGESREM 60

Query: 235 PAFGGPGFGSRFQPPGPRPTPNFGEFMGDRI------PIDVRGFRPPIDAGIHPFGGQLP 294
               G G G RFQ  GPRPT NFG+  GD        P   R   PP + GI   G    
Sbjct: 61  APPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSNTGIRGAGSDFS 120

Query: 295 PRSSEMGLPLNLGGLAGGFRGPNQGLVNP------ASSASQQNFNQSASQHPPPGLQVSP 354
           P+  +  LP N GG  GG+  P    +NP      +SSA+ Q  N++A QH      ++P
Sbjct: 121 PKPGQATLPSNQGGPLGGYGVPP---LNPLPVPGVSSSATLQQQNRAAGQH------ITP 180

Query: 355 VLKTSQSPKQLPPSNQLHSHALTYSQTQTSPALAQQHNQPQNFNSSGQLPFSQPAPSQES 414
           + K   SP+ LP   +         QT    A A   N    +  S QLP SQ  P Q  
Sbjct: 181 LKKPLHSPQGLPLPLR--------PQTNFPGAQAPLQNP---YAYSSQLPTSQLPPQQ-- 240

Query: 415 PGLGGQLAVSQSMGASSAAATHTPLSMNLQSHAAAPSQQQLP-----TPIQPPQNSPSQL 474
                          S A A  TPL++NL+    + +  Q P      P+Q  Q+ PS+L
Sbjct: 241 -------------NISRATAPQTPLNINLRPTTVSSATVQFPPRSQQQPLQKMQHPPSEL 300

Query: 475 AHMLSQQKQTLQARFQSSQQAFSQLQQQLQLIQPPNQSSTLQPSSQTIKQQPHWAGVVTH 534
           A +LSQQ Q+LQA FQSSQQA SQLQQQ+Q +Q PNQ+  L  + +  KQQ  WAG    
Sbjct: 301 AQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ--WAGSAIP 360

Query: 535 TAASAASATSDAHTSTVPPAAINTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPE 594
             AS   +T  ++  T  PA   +Q V  VKC WTEHTSPDG+KYYYN +TGESKWE+PE
Sbjct: 361 RVASTTGSTPVSYVQTAAPAV--SQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPE 420

Query: 595 ELSVIEQQQQKPPILQPHNQPHPQLLSTQQLSQTPQAQLQAQFQTQSQMPHPQPLQQP-- 654
           E+ V E++QQK    Q  +Q  P    T Q SQT    LQ Q Q   Q    Q LQQP  
Sbjct: 421 EMIVFEREQQK----QQQHQEKP----TIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFY 480

Query: 655 -SFHSQEGA-----YTQMQPANNSINDPTRFHQVRCFFYFNATSLFLSQIHVIDYVPQGF 701
            S +   GA     Y  +    NS    +   Q    +      +  + ++ I    Q  
Sbjct: 481 SSLYPTPGASHNTQYPSLPVGQNSQFPMSGIGQNAQDYARTHIPVGAASMNDISRTQQSR 504

[Close]

BLAST of CsGy6G017260 vs. TAIR 10
Match: AT2G47310.1 (flowering time control protein-related / FCA gamma-related )

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-53
Identity = 109/214 (50.93%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 41  SSPDHSDGSNFAKLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKY 100
           S+ D++DGS  AKL+V  + +TATE  IR +FE++GNV E+ L KDK TG++   CF+KY
Sbjct: 100 SATDNADGS-IAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKY 159

Query: 101 TTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAVEY------KLFVGSLNKQA 160
              EE + AI  L  Q T PG + P++VR+A+ ERER+G          KL+V  LNKQ 
Sbjct: 160 KKVEEGNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQT 219

Query: 161 SEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQ 220
           ++ EV E+FS YG++ED+Y+  D+MK  RG  FV++S ++MALAAI ALNG+FT+RG DQ
Sbjct: 220 TKMEVNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQ 279

Query: 221 PLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQP 249
           PL VRFADPKKPR G+ R T  F  P     F P
Sbjct: 280 PLIVRFADPKKPRLGEQRST--FNTPPAMQHFDP 310

HSP 2 Score: 41.6 bits (96), Expect = 3.1e-03
Identity = 40/144 (27.78%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 498 LQPSSQTIKQQPHWAGVVTHTAASAASATSDAHTSTVPPAAINTQVVAPVKCNWTEHTSP 557
           + P++    Q+   A V T +     S+ S+A            Q     +C+W+EHT P
Sbjct: 362 IPPANFEKHQKSETASVETRSDGQKISSHSNAFH--------EDQNTVSSECDWSEHTCP 421

Query: 558 DGYKYYYNSVTGESKWERPEELSVIEQQQQKPPILQPHNQPHPQLLSTQQLSQTPQAQLQ 617
           +G KYY++ +T ES WE+P+E S+ E+  ++   LQ      P L +  Q +     Q++
Sbjct: 422 NGNKYYFHCITCESTWEKPDEYSMYERWLKEQTRLQDEKIKSPPLNNESQEAIENSEQVE 481

Query: 618 AQFQTQSQMPHPQPLQQPSFHSQE 642
           +    Q+       LQQPS  + +
Sbjct: 482 SDVLQQN-----GELQQPSLSTAD 492

The following BLAST results are available for this feature:

BLAST of CsGy6G017260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04425	9.6e-143	48.43	Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 S...	[more]
B8BCZ8	1.4e-125	46.45	Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA...	[more]
Q6K271	1.8e-125	46.74	Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=F...	[more]
Q8GZ26	3.4e-39	35.92	RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1	[more]
Q8LFS6	4.9e-38	44.57	RNA-binding protein BRN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1	[more]

BLAST of CsGy6G017260 vs. NCBI nr


Match Name	Identity	Description
XP_004148821.1	96.29	flowering time control protein FCA isoform X2 [Cucumis sativus] >KGN47451.1 hypo...	[more]
XP_031742925.1	96.15	flowering time control protein FCA isoform X1 [Cucumis sativus]	[more]
XP_031742926.1	95.58	flowering time control protein FCA isoform X3 [Cucumis sativus]	[more]
XP_008458335.1	93.14	PREDICTED: flowering time control protein FCA isoform X2 [Cucumis melo]	[more]
TYK02963.1	93.14	flowering time control protein FCA isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy6G017260 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KI53	96.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G326920 PE=4 SV=1	[more]
A0A5D3BTH3	93.14	Flowering time control protein FCA isoform X2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C7R1	93.14	flowering time control protein FCA isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3C756	93.01	flowering time control protein FCA isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3C885	92.57	flowering time control protein FCA isoform X4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CsGy6G017260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16280.2	6.8e-144	48.43	RNA binding;abscisic acid binding	[more]
AT4G16280.4	6.8e-144	48.43	RNA binding;abscisic acid binding	[more]
AT4G16280.3	3.3e-114	53.04	RNA binding;abscisic acid binding	[more]
AT4G16280.1	5.1e-75	40.83	RNA binding;abscisic acid binding	[more]
AT2G47310.1	2.5e-53	50.93	flowering time control protein-related / FCA gamma-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 465..485
None	No IPR available	GENE3D	2.20.70.10		coord: 547..590 e-value: 2.0E-16 score: 61.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 606..637
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..259
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 23..649
None	No IPR available	PANTHER	PTHR15241:SF308	FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1	coord: 23..649
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 53..129 e-value: 1.1E-17 score: 74.7 coord: 144..219 e-value: 2.0E-20 score: 83.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 54..117 e-value: 5.8E-16 score: 58.1 coord: 145..208 e-value: 5.7E-17 score: 61.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 143..223 score: 16.99474
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 52..133 score: 16.124914
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 546..578 e-value: 1.1E-10 score: 51.5
IPR001202	WW domain	PFAM	PF00397	WW	coord: 549..576 e-value: 6.3E-9 score: 35.8
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 545..578 score: 13.122001
IPR001202	WW domain	CDD	cd00201	WW	coord: 548..578 e-value: 1.24499E-10 score: 54.4562
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 138..229 e-value: 3.9E-26 score: 93.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 40..137 e-value: 9.1E-25 score: 88.7
IPR034645	FCA, RNA recognition motif 2	CDD	cd12637	RRM2_FCA	coord: 144..223 e-value: 3.31653E-48 score: 161.937
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 28..137
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 143..250
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 550..582

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G017260.2	CsGy6G017260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003676	nucleic acid binding