CsGy6G017125 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G017125
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 17634183 .. 17634645 (-)
RNA-Seq Expression	CsGy6G017125
Synteny	CsGy6G017125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTTGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGTATCTTGCATTCACGCCTCCGTTTGACTGCCGCTCGGGGATGTAGTTGTAGATACGTTAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCCTTCTACGACATGCTGTTGTCGTCGCCATATGGAATATGTAACTTAG

mRNA sequence

ATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTTGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGTATCTTGCATTCACGCCTCCGTTTGACTGCCGCTCGGGGATGTAGTTGTAGATACGTTAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCCTTCTACGACATGCTGTTGTCGTCGCCATATGGAATATGTAACTTAG

Coding sequence (CDS)

ATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTTGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGTATCTTGCATTCACGCCTCCGTTTGACTGCCGCTCGGGGATGTAGTTGTAGATACGTTAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCCTTCTACGACATGCTGTTGTCGTCGCCATATGGAATATGTAACTTAG

Protein sequence

MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAARGCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNLX

Homology

[Close]

BLAST of CsGy6G017125 vs. NCBI nr
Match: KAA0062691.1 (hypothetical protein E6C27_scaffold47124G00030 [Cucumis melo var. makuwa] >TYK06542.1 hypothetical protein E5676_scaffold84067G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (796), Expect = 2.76e-106
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL
Sbjct: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154

[Close]

BLAST of CsGy6G017125 vs. NCBI nr
Match: YP_010047116.1 (hypothetical protein J6727_mgp35 [Pyrus betulifolia] >QPJ79552.1 hypothetical protein [Pyrus betulifolia])

HSP 1 Score: 295 bits (756), Expect = 8.77e-100
Identity = 144/154 (93.51%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 28  MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 87

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 88  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 147

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 148 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 181

[Close]

BLAST of CsGy6G017125 vs. NCBI nr
Match: EEF25773.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 294 bits (752), Expect = 1.41e-99
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG +VPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQKVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 121 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 154

[Close]

BLAST of CsGy6G017125 vs. NCBI nr
Match: QCE02896.1 (hypothetical protein DEO72_LG8g912 [Vigna unguiculata])

HSP 1 Score: 293 bits (750), Expect = 2.56e-99
Identity = 144/154 (93.51%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           G SCRYVSLSGSLAPP+ISFYDMLLSSPY ICNL
Sbjct: 121 GWSCRYVSLSGSLAPPVISFYDMLLSSPYSICNL 154

[Close]

BLAST of CsGy6G017125 vs. NCBI nr
Match: KAB1207907.1 (hypothetical protein CJ030_MR7G028854 [Morella rubra] >KAB1219913.1 hypothetical protein CJ030_MR3G009555 [Morella rubra])

HSP 1 Score: 293 bits (749), Expect = 4.04e-99
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSR RLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRPRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 121 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 154

[Close]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL
Match: A0A5A7VAJ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84067G00010 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 1.34e-106
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL
Sbjct: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154

[Close]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL
Match: A0A7T0CRU8 (Uncharacterized protein OS=Pyrus betulifolia OX=436086 GN=ORF211 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 4.25e-100
Identity = 144/154 (93.51%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 28  MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 87

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 88  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 147

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 148 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 181

[Close]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL
Match: B9TEE1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2057350 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 6.82e-100
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG +VPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQKVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 121 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 154

[Close]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL
Match: A0A4D6MN26 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g912 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 1.24e-99
Identity = 144/154 (93.51%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSRLRLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           G SCRYVSLSGSLAPP+ISFYDMLLSSPY ICNL
Sbjct: 121 GWSCRYVSLSGSLAPPVISFYDMLLSSPYSICNL 154

[Close]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL
Match: A0A6A1W4R7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G009555 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.95e-99
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISWQRSCECAV 60
           MRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNAPIS QRSCECAV
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 61  MLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRWEESSPSLCPTDHSAGILHSRLRLTAAR 120
           MLRMLRHRID+PSS SFPVHSLYISDTQGRTRWE SSPSLCP DHSAGILHSR RLTAAR
Sbjct: 61  MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHSRPRLTAAR 120

Query: 121 GCSCRYVSLSGSLAPPLISFYDMLLSSPYGICNL 154
           GCSCRYVSLSGSLAPP+ISFYDMLLSSPY IC+L
Sbjct: 121 GCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHL 154

The following BLAST results are available for this feature:

BLAST of CsGy6G017125 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G017125 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062691.1	2.76e-106	98.05	hypothetical protein E6C27_scaffold47124G00030 [Cucumis melo var. makuwa] >TYK06...	[more]
YP_010047116.1	8.77e-100	93.51	hypothetical protein J6727_mgp35 [Pyrus betulifolia] >QPJ79552.1 hypothetical pr...	[more]
EEF25773.1	1.41e-99	92.86	conserved hypothetical protein [Ricinus communis]	[more]
QCE02896.1	2.56e-99	93.51	hypothetical protein DEO72_LG8g912 [Vigna unguiculata]	[more]
KAB1207907.1	4.04e-99	92.86	hypothetical protein CJ030_MR7G028854 [Morella rubra] >KAB1219913.1 hypothetical...	[more]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAJ4	1.34e-106	98.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A7T0CRU8	4.25e-100	93.51	Uncharacterized protein OS=Pyrus betulifolia OX=436086 GN=ORF211 PE=4 SV=1	[more]
B9TEE1	6.82e-100	92.86	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2057350 PE=4 SV=1	[more]
A0A4D6MN26	1.24e-99	93.51	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g912 PE=4 SV=1	[more]
A0A6A1W4R7	1.95e-99	92.86	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G009555 PE=4 SV=1	[more]

BLAST of CsGy6G017125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G017125.1	CsGy6G017125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion