CsGy6G016680 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein of unknown function (DUF3511)
Location	Gy14Chr6: 15723035 .. 15723307 (-)
RNA-Seq Expression	CsGy6G016680
Synteny	CsGy6G016680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

mRNA sequence

ATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

Coding sequence (CDS)

ATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

Protein sequence

MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR*

Homology

[Close]

BLAST of CsGy6G016680 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 184 bits (468), Expect = 9.19e-59
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
          KAYAVESKLKSSLRSGIRWVKIKCNELLQR
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of CsGy6G016680 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (325), Expect = 6.35e-37
Identity = 73/100 (73.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYT----------AAPTAWNTHSHLHGGSSSVSNGHDEPE 60
          MA KGNRE GGVLKS CRSD YT          AAPTAWNT        SSVSNGHDE E
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNT--------SSVSNGHDEQE 60

Query: 61 VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
          VKRQRRIAKYKAYAVESKLKSSLR+GIRWVKIK +ELL R
Sbjct: 61 VKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of CsGy6G016680 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (318), Expect = 9.40e-36
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSSSVSNGHDEPE 60
           MAA+G+ ERGG LKSPCRSDTY           A   A N HSHLHGGS+    G DE E
Sbjct: 1   MAARGHTERGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSKGGSDESE 60

Query: 61  VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
           VKRQ+RIAKYKAYAVESK K+S+RSGIRWVKIKC +LL+R
Sbjct: 61  VKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

[Close]

BLAST of CsGy6G016680 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 115 bits (289), Expect = 2.69e-31
Identity = 65/104 (62.50%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSP--CRSDTY-----------TAAPTAWN-THSHLHGGSSSVSNGH 60
           MA  GNRERG   KS   C SD Y              P AWN TH H+HGGSS  S G+
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSS-FSGGY 60

Query: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
           DEPE KRQRRIAKYKAYAVESKLKSS R+GIRWVKIKCN++  R
Sbjct: 61  DEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of CsGy6G016680 vs. NCBI nr
Match: KAG6575094.1 (hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013667.1 hypothetical protein SDJN02_23834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106 bits (265), Expect = 6.82e-28
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAA GNR RG  LK PCRSDTY ++       +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAANGNRGRGRELKKPCRSDTYVSS------ENHQLPAASTAAC-HDEPEAKRQRRVAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 83

[Close]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 184 bits (468), Expect = 4.45e-59
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
          KAYAVESKLKSSLRSGIRWVKIKCNELLQR
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 3.08e-37
Identity = 73/100 (73.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYT----------AAPTAWNTHSHLHGGSSSVSNGHDEPE 60
          MA KGNRE GGVLKS CRSD YT          AAPTAWNT        SSVSNGHDE E
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNT--------SSVSNGHDEQE 60

Query: 61 VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
          VKRQRRIAKYKAYAVESKLKSSLR+GIRWVKIK +ELL R
Sbjct: 61 VKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.30e-31
Identity = 65/104 (62.50%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSP--CRSDTY-----------TAAPTAWN-THSHLHGGSSSVSNGH 60
           MA  GNRERG   KS   C SD Y              P AWN TH H+HGGSS  S G+
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSS-FSGGY 60

Query: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90
           DEPE KRQRRIAKYKAYAVESKLKSS R+GIRWVKIKCN++  R
Sbjct: 61  DEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL
Match: A0A7J7CXF2 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01651 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.37e-13
Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 4   KGNRERGGVLKSPCRSDTYTAAPTAWNTHSHL--HGGSSSVSNGHD---EPEVKRQRRIA 63
           +G   R  V  + CR+ + ++   +WN H  L  +  SS+ S+      +PE+KRQRR+ 
Sbjct: 34  EGYDNRRPVSYNACRTSSTSSMVPSWNGHHDLIINPYSSTTSSSWSFNVDPELKRQRRVV 93

Query: 64  KYKAYAVESKLKSSLRSGIRWVKIKCNELL 88
           KYKAYAVE K+K++LRSG+RW+K KC  ++
Sbjct: 94  KYKAYAVEGKMKANLRSGLRWIKNKCGAIV 123

[Close]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL
Match: A0A0A9PAJ0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.71e-13
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 5   GNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYA 64
           G+R    V+K P RS      P   +T S   GGS + +    +PE+KR+RR+A YKAY+
Sbjct: 30  GDRRIDVVVKPPARSPP---PPLPASTKSG--GGSGASAWCFSDPEMKRRRRVASYKAYS 89

Query: 65  VESKLKSSLRSGIRWVKIKCNELL 88
           VE K+KSSLR G RW+K KC+EL+
Sbjct: 90  VEGKVKSSLRRGFRWIKTKCSELI 108

[Close]

BLAST of CsGy6G016680 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-09
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 19  SDTYTAAPTAWNTHSHLHGG--SSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSG 78
           S +YT  PT      +   G  SSS S G  +P+++R++R+  Y+AY VE KLK S R  
Sbjct: 44  STSYTDYPTRIPEDQNPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKS 103

Query: 79  IRWVKIKCNELL 89
            +W+K KCN+LL
Sbjct: 104 FKWIKDKCNKLL 115

[Close]

BLAST of CsGy6G016680 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-09
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 36  HGGSSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
           +  SS    G  + E+KR++RIA+YKAY VE K+KS+L++G RW+K KC +++ R
Sbjct: 55  NASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

[Close]

BLAST of CsGy6G016680 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 14  KSPCRSDTY--------TAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYAV 73
           +SP ++D +           P   ++HS L  G        ++PE+KR+RR+AKYK Y+ 
Sbjct: 45  RSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFKG------WWNDPEIKRKRRVAKYKLYSA 104

Query: 74  ESKLKSSLRSGIRWVKIKCNELL 89
           E K+K +LR   +W+KI+C++++
Sbjct: 105 EGKMKITLRKSYKWIKIQCSKII 121

[Close]

BLAST of CsGy6G016680 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 20/48 (41.67%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 41  SVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELL 89
           S S G  +PE++R++R+A YK Y VE K+K S R+  RW+K +  +++
Sbjct: 54  SKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVV 101

[Close]

BLAST of CsGy6G016680 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05
Identity = 17/41 (41.46%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 48  EPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELL 89
           + E KR++RIA YK YA+E K+KS+++ G  W+K + + ++
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHII 108

The following BLAST results are available for this feature:

BLAST of CsGy6G016680 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G016680 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47400.1	9.19e-59	100.00	hypothetical protein Csa_023055 [Cucumis sativus]	[more]
TYK02938.1	6.35e-37	73.00	hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa]	[more]
KAG7026338.1	9.40e-36	66.00	hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022138799.1	2.69e-31	62.50	uncharacterized protein LOC111009876 [Momordica charantia]	[more]
KAG6575094.1	6.82e-28	63.33	hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy6G016680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCE9	4.45e-59	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1	[more]
A0A5D3BVC0	3.08e-37	73.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CB45	1.30e-31	62.50	uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A7J7CXF2	1.37e-13	42.22	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01651 ...	[more]
A0A0A9PAJ0	3.71e-13	47.62	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of CsGy6G016680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19460.1	9.2e-09	43.06	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	9.2e-09	47.27	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	5.9e-08	33.73	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	2.1e-05	41.67	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	6.2e-05	41.46	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 47..88 e-value: 9.6E-21 score: 73.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..53
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 14..86
None	No IPR available	PANTHER	PTHR33193:SF41	SUBFAMILY NOT NAMED	coord: 14..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016680.1	CsGy6G016680.1	mRNA