CsGy6G016620 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Glycine-rich protein family
Location	Gy14Chr6: 15684006 .. 15687079 (+)
RNA-Seq Expression	CsGy6G016620
Synteny	CsGy6G016620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCAATCAAACTATATAGATATGAATGAACTTTGTATTTTCATCTTTAATTTGTTCACAATTCCATCAACTATGGCTCTCTTTTTCTTGCATTTTGCTAGAGTCCCCCTTTCGGCTATTCTCCTCTTCTACCTTCTCACTTATGGTAATGGGTAGACATGCATTCTTTCTATCTCATTTTATAATACTTTTCAAATAGACGTAAATTTATTTATTTTTGTTTTGATATCAACTTGAACATATAAAACTCGATTGACATAAAACAATAAATTTTACACTTTCTCGTTATAAAAAATTGAGTTTCTTGTGCTATGTTTGGTTATTTGTTTTTTTTAAACTAAACTTATTTTCTTTCGGTTTCTTATAAGGATTTTCATCTTTCTTGACTTAAAAAGTTGAACTATTGACCAAATTCTAAAATTTTCAAATTTGTTTTTTAAGTACTTTTTTATATTTAAAAAACTTGAGTTGATTTTTGAAAATATTGATAAAAAATACATAGCAAAAAAAGAAAAACAAAGGTGGATGATGTGTTTAGATGCTTAATTTTAAAAAAAATGTTTTCAGACAGAACTTATTTTTCCATTTTTTAAAAGTAAACTTATAAACTCTATTTTCATTGATGTTGTCCGTTTTAAAAATTCAAGTCGAAGTGAAGATTTGAATATCTAACCTCAATGTTGATAGTTGAATGAACACACAACCAAACCAAAATTATATATATAAAAAAAAAGTAAAATGAGTAGATTTTGACATAAAACTTAAATGTTCTTTTATTTAAAAAAATTGAAAATCAAGAGAGAGAAAAGGATCAGTTTTAGAAACATAAAAAAGAAAGATGTCACAAGCAAATTTATTAGTATAATGAGCCAAGAATCCCTTAAATTCCATATAATATAATCTATTAAATTTAAAATGAAGCCTTTTCTTTTTCTTTCAGGAAAATGTGATGATTTTGAGAGCGGTTCAACGGGTAGTTCAGTAGGTTTTGAGGACCCGCCTGAGATTGTTGCCAAAGCATTGCTATGCTTTAATGACAGATATGTATGTCTACTTTAATCTCTACTTTTTTTTTTTCCATAATTATTTGGTTTCTAATATAAATTTATTAATCACTAAATTAAAATTTAAAATTGTAGTAAACATAATTTTTTAGATAAATAGAGTAGGAGATTTAAAGTAAAAACCTCTTATTTTTTTGACGAATTGAGCTAAATCAATTATCTTTATTAAGATAATTATTTATTGAATACAACTTAAATGTTTAACGATTGAGCATGGACCATTTTAGATGTTTGGAGATTAAATAAACATGCATGTCAAAGTTAAAAAACTAAGCAGGTAGTTTAGTTGATTTTATAATACCCAACTTGTTTGTGTGTGTGATTTTTTCCATAAGATTACGAGGGTTTTTTACAAAAATAGAAAAAAATATATTTATACAAAGGAATTTATAAAGAATAATAAAATAAATACAGATATACAGCGCGTGTGAAGAATCGTATAGATTAAAGGAGAGTGGGAATCTTGAAGTACCACTAGAGAAAACGGAGGAATATTGCAACGGACCGTGTTTGAGTGAAACGGAGTTGGTGTTGGATTGCATTAGTGGCATTTTTAGCAACTTCTTGTTTTACAATAGAGCCACCTTGCAAGATGTTAGGGATACGGTCCACGCTGGATGTGGCTATGGCCCACAAAGAGGTACTACTTTTTTTTTTTAATTATTATTTATTTTTTTGTTGAATATATCTATATCATTTGGTTTGGAGAAATGGTAAAAAAAAAAAAAAAAGAGTACAATATTTATACATAATAGTAAAATTAGGATACTACAAAAATTGAATTTTGATGAATAAATGTGGACTTAGTTTATTGTATTTTCAATTTGTTGGTAGGTGAGCTCTGTATTTTCAATTTGTTGGTAGGTGAGCTTAACCCGTTGCTATTTTATTAACCTTCCATTTTAAGGTTAAGATAGAAAGTTCAATTCCACGCTATAGTTATTTTACTAAAATAAAAAGTACACGTTAAATTTATTTATTTCTTTTCTCTTGGTTATTTAGTTTAAAAAACTAAGAAAATATTTTTTTTTAAATTTATTTTTGGTTTTATAATGGTCTAAGAATCTAACTATATTTTTGAAAAAAATGCAATCCGTAATAAAAATATAAAAATAAATATGATTAGTTTTAAAAAGTAAATAACAAAATCACTCACAAACAATTACTTGATTATTTTTTTTAGTTTTGAAACCTATTATATAAATATTATCTCCCCTGTTTTTTTTTTAAATTGAGTCAAAGTTTTTAACATTTAAAAAATAGTTTTTTAAATGAAAAATTTGCAGAAATGAAAGAAAATGTAAAATATTTGCAACTTATGACAAAAAAAATATTGGATTTAAAATTTTAATTATTCATTTCTTTACTTGTATTAAAATATTTCTATACGTTGTAAATAGTTAATTATTCTATTTTTAAAATTTTCTAAATTTGACTAATAATTTAACTCTTTTACTTAAAAATTTAAAAAGTAAACTTAATTTTAAAAAATAAATACCAAATAATATGTACATTTTTATCCATAAATTTCACTGAAACTCAGTAAAAGAAGTTGAAATCAAGATTGACCCAAGGAATTCAAAAACCACTACTGTGGACACACTATTATATGACACAAGCATGCTTCACGATTTCACTATTTATCCCAATCATTCATTAATTCTTTTAAAATATATATTCATTGGGCACATACCAAAGTCTATATAGTTTAAGTGTATATAATTATTAGTTGGTATGTAAAGTACAACCCTAAATTTCATTTTTGTAACTGCAGGAAACTTTGATGTTTTGGAGCATATAAATGCAGAAAGAGGCAATGCTTGTAGGGCTTCCAACATGGCAGCTCTTGGATTTTCCTTTTTCATTTTAGCCCTTCTTAGCTTATTGCTTTGAAAACCTTCATTTTCTCACTATGGACATTCTATTAACATGGCTTCCATTAATTATTCAAACATAGTGTATGAAAGAAAATATATTTAGTGTAGTGCTTTAGCTGTTGTAATTCTC

mRNA sequence

ATGATCCAATCAAACTATATAGATATGAATGAACTTTGTATTTTCATCTTTAATTTGTTCACAATTCCATCAACTATGGCTCTCTTTTTCTTGCATTTTGCTAGAGTCCCCCTTTCGGCTATTCTCCTCTTCTACCTTCTCACTTATGGAAAATGTGATGATTTTGAGAGCGGTTCAACGGGTAGTTCAGTAGGTTTTGAGGACCCGCCTGAGATTGTTGCCAAAGCATTGCTATGCTTTAATGACAGATATATATACAGCGCGTGTGAAGAATCGTATAGATTAAAGGAGAGTGGGAATCTTGAAGTACCACTAGAGAAAACGGAGGAATATTGCAACGGACCGTGTTTGAGTGAAACGGAGTTGGTGTTGGATTGCATTAGTGGCATTTTTAGCAACTTCTTGTTTTACAATAGAGCCACCTTGCAAGATGTTAGGGATACGGTCCACGCTGGATGTGGCTATGGCCCACAAAGAGGAAACTTTGATGTTTTGGAGCATATAAATGCAGAAAGAGGCAATGCTTGTAGGGCTTCCAACATGGCAGCTCTTGGATTTTCCTTTTTCATTTTAGCCCTTCTTAGCTTATTGCTTTGAAAACCTTCATTTTCTCACTATGGACATTCTATTAACATGGCTTCCATTAATTATTCAAACATAGTGTATGAAAGAAAATATATTTAGTGTAGTGCTTTAGCTGTTGTAATTCTC

Coding sequence (CDS)

ATGATCCAATCAAACTATATAGATATGAATGAACTTTGTATTTTCATCTTTAATTTGTTCACAATTCCATCAACTATGGCTCTCTTTTTCTTGCATTTTGCTAGAGTCCCCCTTTCGGCTATTCTCCTCTTCTACCTTCTCACTTATGGAAAATGTGATGATTTTGAGAGCGGTTCAACGGGTAGTTCAGTAGGTTTTGAGGACCCGCCTGAGATTGTTGCCAAAGCATTGCTATGCTTTAATGACAGATATATATACAGCGCGTGTGAAGAATCGTATAGATTAAAGGAGAGTGGGAATCTTGAAGTACCACTAGAGAAAACGGAGGAATATTGCAACGGACCGTGTTTGAGTGAAACGGAGTTGGTGTTGGATTGCATTAGTGGCATTTTTAGCAACTTCTTGTTTTACAATAGAGCCACCTTGCAAGATGTTAGGGATACGGTCCACGCTGGATGTGGCTATGGCCCACAAAGAGGAAACTTTGATGTTTTGGAGCATATAAATGCAGAAAGAGGCAATGCTTGTAGGGCTTCCAACATGGCAGCTCTTGGATTTTCCTTTTTCATTTTAGCCCTTCTTAGCTTATTGCTTTGA

Protein sequence

MIQSNYIDMNELCIFIFNLFTIPSTMALFFLHFARVPLSAILLFYLLTYGKCDDFESGSTGSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL*

Homology

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BLAST of CsGy6G016620 vs. NCBI nr
Match: XP_004150092.2 (uncharacterized protein LOC101212342 [Cucumis sativus] >KAE8647084.1 hypothetical protein Csa_023016 [Cucumis sativus])

HSP 1 Score: 400 bits (1028), Expect = 1.16e-140
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MIQSNYIDMNELCIFIFNLFTIPSTMALFFLHFARVPLSAILLFYLLTYGKCDDFESGST 60
           MIQSNYIDMNELCIFIFNLFTIPSTMALFFLHFARVPLSAILLFYLLTYGKCDDFESGST
Sbjct: 1   MIQSNYIDMNELCIFIFNLFTIPSTMALFFLHFARVPLSAILLFYLLTYGKCDDFESGST 60

Query: 61  GSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSET 120
           GSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSET
Sbjct: 61  GSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSET 120

Query: 121 ELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASN 180
           ELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASN
Sbjct: 121 ELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASN 180

Query: 181 MAALGFSFFILALLSLLL 198
           MAALGFSFFILALLSLLL
Sbjct: 181 MAALGFSFFILALLSLLL 198

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BLAST of CsGy6G016620 vs. NCBI nr
Match: XP_008458378.1 (PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo])

HSP 1 Score: 343 bits (881), Expect = 2.77e-118
Identity = 170/181 (93.92%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 22  IPSTMALFFLHFARVPLSAILLFYLLTYG----KCDDFESGSTGSSVGFEDPPEIVAKAL 81
           I STMALFFLH+ARVPLSAILLFYLLTYG    KCDDFESGSTG SVGFEDPPEIVAKAL
Sbjct: 16  ITSTMALFFLHYARVPLSAILLFYLLTYGCFYGKCDDFESGSTGGSVGFEDPPEIVAKAL 75

Query: 82  LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFY 141
           LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCI+GIFSNFLFY
Sbjct: 76  LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCINGIFSNFLFY 135

Query: 142 NRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLL 198
           NRATLQDVRDT+HAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFIL L SLL
Sbjct: 136 NRATLQDVRDTIHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILGLFSLL 195

[Close]

BLAST of CsGy6G016620 vs. NCBI nr
Match: XP_038906636.1 (uncharacterized protein LOC120092583 [Benincasa hispida])

HSP 1 Score: 307 bits (787), Expect = 3.01e-104
Identity = 152/177 (85.88%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 26  MALFFLHFARVPLSAILLFYLLT----YGKCDDFESGSTGSSVGFEDPPEIVAKALLCFN 85
           MA+ FLHFAR+P+SAIL+ YLLT    YGKCDDFESGSTGSSVGF DPPEIVAKALLCFN
Sbjct: 1   MAIVFLHFARIPISAILILYLLTCGCFYGKCDDFESGSTGSSVGFVDPPEIVAKALLCFN 60

Query: 86  DRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRAT 145
           DRYIYSACEES RLKESGNLEVP EKTEEYCNGPCLSET LVLDCI+GIFSNFLFYNRAT
Sbjct: 61  DRYIYSACEESCRLKESGNLEVPQEKTEEYCNGPCLSETHLVLDCINGIFSNFLFYNRAT 120

Query: 146 LQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           LQDVRDT+ AGCGYGPQRGNFDVLEHI AERGNACRASN A LGF  FI  L SLLL
Sbjct: 121 LQDVRDTIQAGCGYGPQRGNFDVLEHIKAERGNACRASNKAVLGFCLFIWGLFSLLL 177

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BLAST of CsGy6G016620 vs. NCBI nr
Match: XP_023514279.1 (uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268 bits (686), Expect = 7.28e-89
Identity = 132/177 (74.58%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 26  MALFFLHFARVPLSAILLFYLLT----YGKCDDFESGSTGSSVGFEDPPEIVAKALLCFN 85
           M L F  F R+ +SA+ LFYLLT    YGK DD E  ++   VG+EDPPEIVAKALLCFN
Sbjct: 1   MPLVFFPFPRISISAVALFYLLTSSYLYGKGDDAEGVASSGFVGYEDPPEIVAKALLCFN 60

Query: 86  DRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRAT 145
           D+YIYSACEESYRLK SGN+EVPLE+TEEYCNGPCL ET LVLDCI GIFSNFLFYN+AT
Sbjct: 61  DKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNKAT 120

Query: 146 LQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           LQDVRDT+HAGCGYGPQRGNFDVLEHI AE G A RASN   +GFSF IL+L SL L
Sbjct: 121 LQDVRDTIHAGCGYGPQRGNFDVLEHIRAETGKAWRASNKTVIGFSFIILSLFSLFL 177

[Close]

BLAST of CsGy6G016620 vs. NCBI nr
Match: XP_023000051.1 (uncharacterized protein LOC111494359 [Cucurbita maxima])

HSP 1 Score: 266 bits (681), Expect = 7.49e-88
Identity = 131/179 (73.18%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 24  STMALFFLHFARVPLSAILLFYLLT----YGKCDDFESGSTGSSVGFEDPPEIVAKALLC 83
           STMAL F  F R+ +SA+ +FYLLT    YGK DD E  ++   VG+EDPPEIVAKAL C
Sbjct: 16  STMALVFFPFTRISISAVAVFYLLTSCYLYGKGDDAEGVASSGFVGYEDPPEIVAKALRC 75

Query: 84  FNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNR 143
           FND+YIYSACEESYRLK SGN+EVPLE+TEEYCNGPCL ET LVLDCI GIFSNFLFYN+
Sbjct: 76  FNDKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNK 135

Query: 144 ATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           ATLQDVRDT+HAGCGYGPQRGNFDVLEHI AE   A RASN   +GFSF IL + SL L
Sbjct: 136 ATLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKIVIGFSFIILGVFSLFL 194

[Close]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL
Match: A0A0A0KCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G311000 PE=4 SV=1)

HSP 1 Score: 352 bits (902), Expect = 3.76e-122
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 26  MALFFLHFARVPLSAILLFYLLTYGKCDDFESGSTGSSVGFEDPPEIVAKALLCFNDRYI 85
           MALFFLHFARVPLSAILLFYLLTYGKCDDFESGSTGSSVGFEDPPEIVAKALLCFNDRYI
Sbjct: 1   MALFFLHFARVPLSAILLFYLLTYGKCDDFESGSTGSSVGFEDPPEIVAKALLCFNDRYI 60

Query: 86  YSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRATLQDV 145
           YSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRATLQDV
Sbjct: 61  YSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRATLQDV 120

Query: 146 RDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           RDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL
Sbjct: 121 RDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 173

[Close]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL
Match: A0A1S3C8B8 (uncharacterized protein LOC103497804 OS=Cucumis melo OX=3656 GN=LOC103497804 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 1.34e-118
Identity = 170/181 (93.92%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 22  IPSTMALFFLHFARVPLSAILLFYLLTYG----KCDDFESGSTGSSVGFEDPPEIVAKAL 81
           I STMALFFLH+ARVPLSAILLFYLLTYG    KCDDFESGSTG SVGFEDPPEIVAKAL
Sbjct: 16  ITSTMALFFLHYARVPLSAILLFYLLTYGCFYGKCDDFESGSTGGSVGFEDPPEIVAKAL 75

Query: 82  LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFY 141
           LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCI+GIFSNFLFY
Sbjct: 76  LCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCINGIFSNFLFY 135

Query: 142 NRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLL 198
           NRATLQDVRDT+HAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFIL L SLL
Sbjct: 136 NRATLQDVRDTIHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILGLFSLL 195

[Close]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL
Match: A0A6J1KET4 (uncharacterized protein LOC111494359 OS=Cucurbita maxima OX=3661 GN=LOC111494359 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 3.63e-88
Identity = 131/179 (73.18%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 24  STMALFFLHFARVPLSAILLFYLLT----YGKCDDFESGSTGSSVGFEDPPEIVAKALLC 83
           STMAL F  F R+ +SA+ +FYLLT    YGK DD E  ++   VG+EDPPEIVAKAL C
Sbjct: 16  STMALVFFPFTRISISAVAVFYLLTSCYLYGKGDDAEGVASSGFVGYEDPPEIVAKALRC 75

Query: 84  FNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNR 143
           FND+YIYSACEESYRLK SGN+EVPLE+TEEYCNGPCL ET LVLDCI GIFSNFLFYN+
Sbjct: 76  FNDKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNK 135

Query: 144 ATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           ATLQDVRDT+HAGCGYGPQRGNFDVLEHI AE   A RASN   +GFSF IL + SL L
Sbjct: 136 ATLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKIVIGFSFIILGVFSLFL 194

[Close]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL
Match: A0A6J1EX17 (uncharacterized protein LOC111436937 OS=Cucurbita moschata OX=3662 GN=LOC111436937 PE=4 SV=1)

HSP 1 Score: 263 bits (671), Expect = 1.21e-86
Identity = 131/179 (73.18%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 24  STMALFFLHFARVPLSAILLFYLLTY----GKCDDFESGSTGSSVGFEDPPEIVAKALLC 83
           STMAL F  F R+ +SA+ +FYLLT     GK DD E  ++   VG+EDPPEIVAKAL C
Sbjct: 16  STMALVFFPFPRMSISAVAVFYLLTSCYLTGKGDDAEGVASSGFVGYEDPPEIVAKALRC 75

Query: 84  FNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNR 143
           FND+YIYSACEESYRLK SGN+EVPLEKTEEYC+GPCL ET LVLDCI GIFSNFLFYN+
Sbjct: 76  FNDKYIYSACEESYRLKASGNVEVPLEKTEEYCSGPCLGETHLVLDCIDGIFSNFLFYNK 135

Query: 144 ATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 198
           ATLQDVRDT+HAGCGYGPQRGNFDVLEHI AE   A RASN   +GFSF IL L SL L
Sbjct: 136 ATLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKTVIGFSFIILGLFSLFL 194

[Close]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL
Match: A0A6J1CAS9 (uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.43e-72
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 47  LTYGKCDDFES-GSTGSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPL 106
           L  GK DD E  G+T  S+G+EDPPEIVAKALLCFND+YIY ACEES RLKESGN+EVP+
Sbjct: 468 LLIGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESGNVEVPV 527

Query: 107 EKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVL 166
           EKT+E+CNGPCL ET LVLDCI+ IF+NFLFYNRATLQDVRDT+ AGC YGPQRGNFDV 
Sbjct: 528 EKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGNFDVT 587

Query: 167 EHINAERGNACRASNMAALGFSFFIL 191
           +HI AERG ACRASN A LGFSF IL
Sbjct: 588 KHIRAERGKACRASNNAVLGFSFIIL 613

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BLAST of CsGy6G016620 vs. TAIR 10
Match: AT5G49350.1 (Glycine-rich protein family )

HSP 1 Score: 154.8 bits (390), Expect = 7.1e-38
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 58  GSTGSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCL 117
           G  G  +G EDPPEIVAKAL C N+++IY  C+ES+RL  +G+L +PL +TEE+C GPC 
Sbjct: 166 GLGGGGLGGEDPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGPCF 225

Query: 118 SETELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACR 177
           SET L L+CI  I  ++ F+NRAT+ D+R+T+ +GC YGP+RG F+VLEHI  E  NA  
Sbjct: 226 SETHLALNCIEEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENASE 285

Query: 178 ASNMAALGFSFFILALL 195
               +  G   FI+ALL
Sbjct: 286 KIK-SRFGPLLFIIALL 301

[Close]

BLAST of CsGy6G016620 vs. TAIR 10
Match: AT5G49350.2 (Glycine-rich protein family )

HSP 1 Score: 154.8 bits (390), Expect = 7.1e-38
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 58  GSTGSSVGFEDPPEIVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCL 117
           G  G  +G EDPPEIVAKAL C N+++IY  C+ES+RL  +G+L +PL +TEE+C GPC 
Sbjct: 89  GLGGGGLGGEDPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGPCF 148

Query: 118 SETELVLDCISGIFSNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACR 177
           SET L L+CI  I  ++ F+NRAT+ D+R+T+ +GC YGP+RG F+VLEHI  E  NA  
Sbjct: 149 SETHLALNCIEEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENASE 208

Query: 178 ASNMAALGFSFFILALL 195
               +  G   FI+ALL
Sbjct: 209 KIK-SRFGPLLFIIALL 224

[Close]

BLAST of CsGy6G016620 vs. TAIR 10
Match: AT1G56320.1 (BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 72  IVAKALLCFNDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIF 131
           +V +A  CFN+  +Y  C E++RL + G  +VP E+T+ +CNGPC +ETELVL CI+ + 
Sbjct: 39  LVQRAAFCFNNNLLYRGCNEAFRLNQQGEFKVPPEETDRFCNGPCSAETELVLTCINSVM 98

Query: 132 SNFLFYNRATLQDVRDTVHAGCGYGPQRGNFDV 165
           S+F+FYNRAT +DVR+ +  GC     RGNF+V
Sbjct: 99  SDFVFYNRATPRDVRNALRGGCSSSFTRGNFNV 131

The following BLAST results are available for this feature:

BLAST of CsGy6G016620 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G016620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150092.2	1.16e-140	100.00	uncharacterized protein LOC101212342 [Cucumis sativus] >KAE8647084.1 hypothetica...	[more]
XP_008458378.1	2.77e-118	93.92	PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo]	[more]
XP_038906636.1	3.01e-104	85.88	uncharacterized protein LOC120092583 [Benincasa hispida]	[more]
XP_023514279.1	7.28e-89	74.58	uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo]	[more]
XP_023000051.1	7.49e-88	73.18	uncharacterized protein LOC111494359 [Cucurbita maxima]	[more]

BLAST of CsGy6G016620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCE5	3.76e-122	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G311000 PE=4 SV=1	[more]
A0A1S3C8B8	1.34e-118	93.92	uncharacterized protein LOC103497804 OS=Cucumis melo OX=3656 GN=LOC103497804 PE=...	[more]
A0A6J1KET4	3.63e-88	73.18	uncharacterized protein LOC111494359 OS=Cucurbita maxima OX=3661 GN=LOC111494359...	[more]
A0A6J1EX17	1.21e-86	73.18	uncharacterized protein LOC111436937 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]
A0A6J1CAS9	1.43e-72	77.40	uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsGy6G016620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49350.1	7.1e-38	52.55	Glycine-rich protein family	[more]
AT5G49350.2	7.1e-38	52.55	Glycine-rich protein family	[more]
AT1G56320.1	3.1e-25	49.46	BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34366:SF2	OS07G0289901 PROTEIN	coord: 28..195
None	No IPR available	PANTHER	PTHR34366	OS07G0289901 PROTEIN-RELATED	coord: 28..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016620.1	CsGy6G016620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding