CsGy6G016600 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016600
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	28S ribosomal protein S29, mitochondrial
Location	Gy14Chr6: 15669273 .. 15674508 (+)
RNA-Seq Expression	CsGy6G016600
Synteny	CsGy6G016600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATAACAGAAGGAGGCTCACTCCGTTGACAGAGTTTCGCAAAACACGAAATCTCACATTTGTCTTCGTTCCATCTCTCACCGGCGGAAAATGTTGCGGTCAATTCTCAGAGCAACATCTGCAGCCTCCAAACACCACATCTGCAATCGAAACCCTGCGCCCATCCTATCCCTTACTTCAAATTACTCAGCTAAGACCACCAAACCCCCCGTCAAGAAGGGCAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGTGACGACCCCTCCGCCTCTGCTGCTGCTTCCGACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATACAAGTACGTATGTTTTCTACATTGTTTGTGAGTTAATATTTTTTGGGATTTTTATTTATTTCTTTGCGAAATGGAAGTATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTGCTGTCTCCGGCTGGTATTACTTTTCTTCTACTCTCATTTCTTCAGATGGTTATCGTGTTATTTAGATATATCGAAGATACTGGTAATTTAGGGTGGAGACTGGACTCTTGAACGTCTGAATCTTTGGTCGAACAAATGTATTTAGCTATTCATATTCAAATGTCCAGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCATCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAATTAGATTGAAGTACTGGCGTGTTTTTTTCAGGATCTTCTAGTGCATTTGTCATGATTATGCAGGTCCAAATTTCAATAGTTTTCTTATTGAAGTCTTTGGGATCGCTACCTCATGCTCTATTTTTCCGTCTTTTCTAACTCTCAAACCTTGTAATTGCATCAGATTTAGACATGTAGTTTAATGCTGTATTTCCTAATTCCATTGATGGATGTTAATTCTTACTAAACGTTGTTGAGAATCTTGACAAGGGAAATGATCTCTCATGATCATGATTATTCATGGTAGCTGACTGGGAAATGTTTTGCCTAGTGTTTACCGATTTGTGATGAGCTTTCAGGAGATGATGTGAGGACTTAGGATAAATATATAATACTGAACAGTTGACTTAGACTTATATACTTTTCTTTGGCGGGCTGGTTTGGACCAGGATTTTCTGAAGTACAATGAGATCCAGTTAAGACAATTGCCGTGCCAAATATATGAACCTATACCGTTGGGAGAGGGTGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATACGACTTAATTGATACTGGAATCAAGCACACTCATGTGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGACATTCCTGTGCTCATTGCTATTGATCAAGTGAGACTCAAATCTACATCTACCCTTTATTTGATTTCTAAAATGAAGTTTCTTGGACGAATTAAACATTCCAAAATGAATTTTGTTGCAATAATGATTGTTACTTCTTGTCCAGTATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTTAGTACTACTTTGGATTGAAAGTATTGTGTTCTAGTTAATTCTGTTTATTACAATTCATTGGGCGTTCCTAGAATATCATATCGGTTTTTGTGTTTAGTAACTTACCTCATGCATTTTAGCTAGCCCCTCTACATCCATCGTTTTTGTAGTCCCTTTGCCTTGAAATTTCAATTTTTGCTGTGAAACTCATGTCCTTCACTTCTTTTACCTATTTTTCTGGTTAGATGTTAGAGACTAAAACATGACAGATAGGGCGATATGATTCAAAAAAGGAGAGTAAAGTTGAAAGAATTATGGAATGAACGATGGCTTTGTGCATACAAGTGAAGAAATATAATAGTTATAGCTTTTTGTGGGAGTCTTTCTGAGTTACTTATAATTTTGCTGCGTGTTTCAAGTTTCAACTATGTTTTCTCTTAATCTTTTTTTATTTGATTTTTCCTATCTTTTTCTTTTCCTATTTCCCATTTAGATTAGCTTTGGAAATGCACGGTTCAATTTATATGAATTTTGATAGGTTTTTGATTATCCCATAAAAAAGAAAAAGAAAAAAGAGGACAAAGATCGGGTTTAAGGCAATGGGGCTTATTAATAGAGTATCAGAATTAGGGAGTACAAATAGATCATGAGGAGAAAGAGAATTGGAAGACTCATTCAATAATATTATGTCAATGGCACAACTTGACCAGTGAGTTAAAAATGGAAAACCCAAGTTTGACAATAGTTCAGAAGTTCGGTTCTAAGTGGTTGGAGGATGTAAAAGCTAGGTTCAAGTACACGTTTGACTCAAATTTAGTTGTGTGCAGTAGATTCTTGAAACTTAAAAATTTACAATAAGTTAAATTTATTATAAGTTTTTAAATCTTTTTATATTGTGTCGGGACAGAAGAAGATTTGAATCATATTCTTTGAAGTTGTGCTTTTGCAACATCTATTTGGAGTTTATTTATTTCTTGTGTTTGGTCCATTTAGCCATTGAGATCAAGGGAGATGGTTAAAGAGTTCCTTCCCATTCTACCCTTTGCGAGAGGGAGAGGTTCCTAATTCCTATGGCAAGTTGGGGTTGGGGCTTTAGTGTGGAGTCTCAGGAGGAGTGGAACAAACATATCCTTTAGAGGAGTTGAGAGGGGGTTCTTGTGACATTTGGTTACTTTGTCAGGTTTCATGTATCTCTTTAGGTGTGTGTTGTTGACGAAGTCTTTTTGTAATTATTTTCTAAGTCTTATTCTTCTTGATGAGAGTCATTTATCACTTTAAAGAGTTATTTTTCTAGCCTTGGTGTTTTTGGATGTCATTGTATTCTTTCAAAGTTGACCCTTTCTAATTATTATTATTATTTTATTACTATTACTTTTTTACCTTAATAATTTGTCTCTAAAAACCAACTGATTAGCCTTTGGATTCTCAAGTTCATGAACTTTCACTTGTGTGTCTAAATAGGTTTCTAATCTTTGAGACGCTATTTAAAGTTCTAAGACTTGTTAGACTCAAAATTAATAACTTAAAGACATTAAAAGCTCTTACCATTATAACCGTTCGGGAATGTGTGATATTTTTAAAGTAAAGGTGCCTTGTACCCATTAGACTCGGCTTTAAAAGTTTCAAACAAAAGATTTTTTTTTCTTCCAATCAATGATGAGAATTTCTAATCTTTGGCAGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGGTATGCAGTATGCTTATGTGGTTCTTATTTTGAAAGCAAACTAATTTCACTGAAATAAATTAAGAATTTAATATAAACTGAAAAAATGAATTACAAAAGATTTGTTTGATCAAGGATTTAGAATAAGCCCCCTATTTGTCTATGATGGTAGATCAGAGCTTTTAAAAAGATGGTACGCCAACTCCCGTCTTTTGACCTATATTTTAAAAGCTTTCTTATTTCGACATTCTCAAGTCTTATTGATACTGGATGAACTAGAAAGCTTGTTAATTAACAACCAACCTAGGAGAATCGTGTAGGTATAGAATCCTATTAACGAGTTAAAGCCATTTGAAAAAAAAATCGAAATACAGGAGGGACTATAGTCAAGAAAACTACTAGAATTTCTCCTACCGTGATAAATGCTGGCTTAGAGAATAGTTAAAGAAGGAAGAGTATTAAGAAAAACAACTGTATTGGAAAACTATCAAGAGTTCCATCAACCCTTGGAAGTTTTGTTGCTGCAGATTAGAGTTTCCTTGGCCAAAACAATAGAGGTAGTTGCATAATTTTCAGTTCACAAGGTAGGGACACTGCTAACTGCTAAGATTGAGGATCCCTTTTGTAATTGTTTACTGGTGGGATGGTTGATGAAGTCTAATCGTTTACGTGATTCTTTTCTATGGGTAAGCATTCAGTACATTTGAGGGGATTAATAGTAATGAACAAGATGCGTATTACTTCATAAAGATCTGTTAAATGAATGCCGTCTATCTCTTTTTAGTCTAAAATTTGAAGTTGCATTTGCATATATTCGTCTGCTTGGTTGCATACTTGGCATGATTTTGATTAGCTCACAGCCTGGTTTCTATACAAATGTTGCATTGTAGGGGGATTGTTTGCTTAGTTAGTTGTTTGTTTTCTTGACAGACAAAGACTGATCCGTCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGATATACTATTTGTCAAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGGTGACAACAATGAGGCCTATTTCCTTCCTGCCTGCTCGACTCTGGACTCGGTACCATTGCTTAGTTCTCATGGAGATTCCTTCCCTCAGAATCAGATTCCCCTAACCTTCTCACTCTATTCTACATATCATAGGTTTGCTGCTCTCTAATAAGGGCCACATCAGAGAATTAACCTTTTGTAGGGCACAATTTTTATAGTCTACCTACATTCTTCAGTAAGCTGTCATCTTTAATGGAAAAACTTGAGATACTTTGCCCATTTTGGTCATTCATTTTGCAATAGTTTTCCGCACTTACCTATTCTATTTCTTTCATTGTTGGCTTAAATACCATTTTGTTCTTCAACTCTTTTTTGTTCTACATCTTTTACCATAAAATTTTAGTTCCTGTACACAAGTCCCCCAATTACCAT

mRNA sequence

ACATAACAGAAGGAGGCTCACTCCGTTGACAGAGTTTCGCAAAACACGAAATCTCACATTTGTCTTCGTTCCATCTCTCACCGGCGGAAAATGTTGCGGTCAATTCTCAGAGCAACATCTGCAGCCTCCAAACACCACATCTGCAATCGAAACCCTGCGCCCATCCTATCCCTTACTTCAAATTACTCAGCTAAGACCACCAAACCCCCCGTCAAGAAGGGCAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGTGACGACCCCTCCGCCTCTGCTGCTGCTTCCGACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATACAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTGCTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCATCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGATCCAGTTAAGACAATTGCCGTGCCAAATATATGAACCTATACCGTTGGGAGAGGGTGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATACGACTTAATTGATACTGGAATCAAGCACACTCATGTGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGACATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATCCGTCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGATATACTATTTGTCAAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGGTGACAACAATGAGGCCTATTTCCTTCCTGCCTGCTCGACTCTGGACTCGGTACCATTGCTTAGTTCTCATGGAGATTCCTTCCCTCAGAATCAGATTCCCCTAACCTTCTCACTCTATTCTACATATCATAGGTTTGCTGCTCTCTAATAAGGGCCACATCAGAGAATTAACCTTTTGTAGGGCACAATTTTTATAGTCTACCTACATTCTTCAGTAAGCTGTCATCTTTAATGGAAAAACTTGAGATACTTTGCCCATTTTGGTCATTCATTTTGCAATAGTTTTCCGCACTTACCTATTCTATTTCTTTCATTGTTGGCTTAAATACCATTTTGTTCTTCAACTCTTTTTTGTTCTACATCTTTTACCATAAAATTTTAGTTCCTGTACACAAGTCCCCCAATTACCAT

Coding sequence (CDS)

ATGTTGCGGTCAATTCTCAGAGCAACATCTGCAGCCTCCAAACACCACATCTGCAATCGAAACCCTGCGCCCATCCTATCCCTTACTTCAAATTACTCAGCTAAGACCACCAAACCCCCCGTCAAGAAGGGCAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGTGACGACCCCTCCGCCTCTGCTGCTGCTTCCGACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATACAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTGCTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCATCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGATCCAGTTAAGACAATTGCCGTGCCAAATATATGAACCTATACCGTTGGGAGAGGGTGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATACGACTTAATTGATACTGGAATCAAGCACACTCATGTGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGACATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATCCGTCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGATATACTATTTGTCAAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGGTGA

Protein sequence

MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPSASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPVQAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR*

Homology

[Close]

BLAST of CsGy6G016600 vs. NCBI nr
Match: XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus])

HSP 1 Score: 901 bits (2328), Expect = 0.0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy6G016600 vs. NCBI nr
Match: XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus])

HSP 1 Score: 869 bits (2246), Expect = 0.0
Identity = 440/455 (96.70%), Postives = 446/455 (98.02%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy6G016600 vs. NCBI nr
Match: XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa])

HSP 1 Score: 865 bits (2235), Expect = 0.0
Identity = 437/455 (96.04%), Postives = 445/455 (97.80%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSILRAT+AASKHH CNRNP+PILS TSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAA SD+LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAA-SDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNEI+LRQLPCQI EPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+ WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy6G016600 vs. NCBI nr
Match: XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida])

HSP 1 Score: 828 bits (2139), Expect = 2.32e-301
Identity = 418/455 (91.87%), Postives = 432/455 (94.95%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSIL+AT+AASK H+CNRNP PILSLTSNYSAK TK  +KK KKGKS+AD KAGDD S
Sbjct: 1   MLRSILKATAAASKSHLCNRNPFPILSLTSNYSAKVTKSSIKKAKKGKSKADGKAGDDLS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAA+DDLDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAATDDLDAALSDDKSRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFF+N QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFRNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVL+DFLKYNE  LRQLPCQI EPI LGEG GVGM KGADSM MP+GSTLYDLIDTG
Sbjct: 241 QAEDVLKDFLKYNETCLRQLPCQISEPILLGEGVGVGMMKGADSMTMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGAR+NFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARLNFPRYSLDEAASVVHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSED WKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy6G016600 vs. NCBI nr
Match: XP_022154896.1 (28S ribosomal protein S29, mitochondrial [Momordica charantia])

HSP 1 Score: 825 bits (2131), Expect = 3.84e-300
Identity = 414/455 (90.99%), Postives = 431/455 (94.73%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRS+LRA +AASKHH+CNRNP+PILSL+SNYSAKT K  VKK KKGKS ADAKA DDPS
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A+AAASDDLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVR+SFL+LRDNFRRVVDPSL SP G KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKS ALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNE +LRQLPCQI EPIPLGEG GVGM KGADSM MPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAF+EDAWKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL
Match: A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1)

HSP 1 Score: 901 bits (2328), Expect = 0.0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL
Match: A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1)

HSP 1 Score: 870 bits (2249), Expect = 0.0
Identity = 441/455 (96.92%), Postives = 446/455 (98.02%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)

HSP 1 Score: 865 bits (2235), Expect = 0.0
Identity = 437/455 (96.04%), Postives = 445/455 (97.80%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSILRAT+AASKHH CNRNP+PILS TSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAA SD+LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAA-SDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNEI+LRQLPCQI EPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+ WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)

HSP 1 Score: 865 bits (2235), Expect = 0.0
Identity = 437/455 (96.04%), Postives = 445/455 (97.80%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRSILRAT+AASKHH CNRNP+PILS TSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAA SD+LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAA-SDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNEI+LRQLPCQI EPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+ WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL
Match: A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)

HSP 1 Score: 825 bits (2131), Expect = 1.86e-300
Identity = 414/455 (90.99%), Postives = 431/455 (94.73%), Query Frame = 0


Query: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
           MLRS+LRA +AASKHH+CNRNP+PILSL+SNYSAKT K  VKK KKGKS ADAKA DDPS
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A+AAASDDLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K+NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVR+SFL+LRDNFRRVVDPSL SP G KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
           RKQIVLDGPVNCGKS ALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240

Query: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFLKYNE +LRQLPCQI EPIPLGEG GVGM KGADSM MPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAF+EDAWKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy6G016600 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )

HSP 1 Score: 571.6 bits (1472), Expect = 5.6e-163
Identity = 286/428 (66.82%), Postives = 338/428 (78.97%), Query Frame = 0


Query: 33  SAKTTKPPVKKGKKGKSEADAKAGDDPSASAAASDDLDAALSDD--KIRARRLAAEENDT 92
           S+K+TK  + K KK + +     G DP A+ A   +  AA  DD    RA+RLA +E   
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112

Query: 93  SLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKYNMEGLNEVLPEGLPVGMVKEFEESIRS 152
           SLDVGPNGRPLFT   ++LSQLT KD G+YFK++   L  VLPEGL  G+  EF ES R 
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172

Query: 153 AVLVRQSFLDLRDNFRRVVDPSL--LSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWARE 212
           A+LVR+S+L LRDNFRR+ DP +      G K++KQIVLDGPV CGKSIALAMLV WAR+
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWARD 232

Query: 213 EGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPVQAEDVLRDFLKYNEIQLRQLPCQIYEP 272
           EGWLVLY P GR WTHGG+F+KN  TG WDTP+QAE++L+DF+K+NE +LR+L C+I++P
Sbjct: 233 EGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHDP 292

Query: 273 IPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVL 332
           I LGEGAGVG  KGAD+M +PE STLYDL+  GIK TH AV VVVRLRKELS+VKD+PVL
Sbjct: 293 IVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPVL 352

Query: 333 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKL 392
           I IDQYN+WFTFSE+EEPVT RS RPIHAREL  V AFRSMMH+DMMVGAFSHSTAVGKL
Sbjct: 353 IVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGKL 412

Query: 393 RQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEM 452
           R+DLPDVP+ AR  FPRYSLDEA +V +YYLRQRL+RRE F+E+ WKKIYYL+NGNGAEM
Sbjct: 413 RKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANGNGAEM 472

Query: 453 RWLAPLMR 456
           RWLAP MR
Sbjct: 473 RWLAPFMR 480

The following BLAST results are available for this feature:

BLAST of CsGy6G016600 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G016600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657272.1	0.0	100.00	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypotheti...	[more]
XP_004145300.3	0.0	96.70	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothe...	[more]
XP_008457304.1	0.0	96.04	PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1...	[more]
XP_038895729.1	2.32e-301	91.87	28S ribosomal protein S29, mitochondrial [Benincasa hispida]	[more]
XP_022154896.1	3.84e-300	90.99	28S ribosomal protein S29, mitochondrial [Momordica charantia]	[more]

BLAST of CsGy6G016600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG66	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1	[more]
A0A0A0LVC2	0.0	96.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1	[more]
A0A5A7UZA8	0.0	96.04	28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C6G8	0.0	96.04	28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026...	[more]
A0A6J1DQ31	1.86e-300	90.99	28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CsGy6G016600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16870.1	5.6e-163	66.82	mitochondrial 28S ribosomal protein S29-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 177..377 e-value: 1.1E-28 score: 100.4
IPR019368	Ribosomal protein S23/S29, mitochondrial	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 2..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016600.1	CsGy6G016600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome