CsGy6G016300 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016300
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Location	Gy14Chr6: 15360871 .. 15364504 (-)
RNA-Seq Expression	CsGy6G016300
Synteny	CsGy6G016300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAATTTACCTTTACAAAAGTTTAATGTTTAAATTGAAATAAATCGACCAAACTTCTAAAGTTTAGGGATATAAATAGATTTGGAACTATGGAGTAACCTGTTTTCTATTTTTATAGTATAATGTTTAGTATCATCTCTCCAAATAAAAAGAGTATGCTGTTATTACAAGAGAGTAAAACAATAATGAGTGGAAGAGACAGGATGGTTATAAAGCCAAGTTGACTTAGTAGCCTATGTATTGAAAGTGGTGGCGCTCCAAACAAATTAGCCTTAATTTACTTTGGCTGGAAAAAAACATAATGGTTGGCAATTTATTGACATCATATCCCAAGTTGAGTCCAAAGAAACAAAAACAGAACCCCCCCAAGTTAATTCCATTCCGATTTCTCTACTCCCAGATGTGATTTTTACCAAAACCTGAGAGAAGAGAACCCATCAAAACAGAAACTTTCTATTTCTATTTCCATTTCCAATTTGAAGGTCAAGAAGTGGGTTACTGTTCAATTTATCAACAACACAATGTCTCGTCTATCGAATTTATATCTTCTAACTTACAATTCCCTCCAAGGTTTTGGCTGGTAATGGTATTTTTCAATTTTCCAGTCTTATCTTTCTGCTGTTGTTCTTCGTCAGCAATGGAATTTTCTTTCTTGTTGTCAGGATGGTTTCTCTTTACAGACTTGTGGGAGATTTTGCAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTAAGTTTTTAGCCCTCTATTTTGTTCCTAGGAAAGTTTAGGAATCTGATAGAAAATGTCCGTTGAATTGGATGATGGATAAGAGGTTCTTATGCTTTTCCTTTCTCTTCAAAGGTTTCTTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGTAATTTAAAGGAACTTTGGTGATATTCTTTTCTTTGATATCTCTTAAATCACCCCATAACCCAAATGGTTAAGCTTATGAGTTAAAAGGCAAATTTAACTTTATATCATCTAACTCTTTCCTTCTTTCCTTCACTTTATGCCTTAAATACGGGAAAGACTCAACAAATGGAAACTAATCATAATTGGAGAGAATACAAGTATAAAAGAGATTCAACAAGTGGAAACCAACTTTAATTGGAGAGATGGCAACACATGACCTCCCATACTACACTACACTTCCTTGATGTCATCTTAAATCACCTATTAACCCAAAAGTTTAAGCTCGTGAATAACGACAAATTTTATTTTATATCGCTTAACAATATCCAAGAATGATAACCTTTAAACTTCAGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGGTTCTTTGTCTTTCTCATTATCTTGCAATTTTCTTTACCAGAAAGACATAGTTTCTTGCTGGATGTTTTCCTCCTAGAGAGCCGGAAGAAATAGTGGAAATTTTGTGTAGTTAATTGTATTGTTAATGAATAGAACACTTGGATATATAATATATAAGCATAAGTGCTCCACTAACTACTCAAACAAAATATTTAACGGATTCTATTACAATCTTGATAACATAAACAGCCATAACGTTCATGACAACTACAAGTAATTCACTGCTCTTTCTTTTTGTTTGACAGATTCAACGGTTGCCTTCTGTGTTCATCACTTTCCTAGCTTGGAGCTTATCTGAGGTAAAAAAATTTCTTTTTCTTTCAAAGTTGGGTATCTGTGGTTTACGGTTCATTCTTTCTTTAAATTACTTAACAAAATTAGGTAGTGAACGAGCAGACATTTTTTAAACATATATCTTAGAAGAAAATTAGAGGTTGATTTTAGGTTTGTTAGAGAGTAATAGCCAAGTACCAATTTAGTCTTTACTTATAGATGGATAGTTTGGTAGGGCTGGGCTAGCGAGCAATAAATATAATCATGCTAAGATAATTGTAATCTGTTACAAATATCAGAGATTTTACCTTGCTCTACTGAAAAGTGAAATCTAAGTCTTCCGAATGCAACCTATCTATATCTTAAAAGAAGAAAGAAAGAAAGAAAAAGGTTAATGGCATTCTTCTTATGGTAAAATGATAGCATTCTTTCTTTTTGTGCTTGCTAGTTTGTTGTCTTCTTAACGATTTCCTTTTCTCTCTTTGCTGCTTATTTTCATTGATTTACCTGGAGTTCCATCTCTCCGTCAAATTGTAATTCCTTACACTGATGTTCTCTACCGCCTTTGGGATATTCTTCATCTTCATACGTTTTCTTTTTTCCTTAATCAATTGGGTTTCTGGATTCTTACTGTGATGAAATGGATTCAGGTTATCAGATATTTTCACCATGCTTTGAATTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACTCTTCATCTTCCAAGGAAAACAACACGTACCCAAAATGAGAAGAATAATTCTAATATTTAATTTTGTGTTTTGTTTCTTCTAGGTACACTGCATTCATAATCCTCTATCCTATTGGAGTGACAATTGGTGAAAGTGAGTCACAATATCTAACTCATCTTTATTCCTATAATTTGATATATCTTCAAGGAACTGGCGTAGTGCTTAGTTCACTGGTTGGGTTTGTATAGGCTAGAATTGGGGAGCTGATCTATGTATTGCTACTTAAACCCACGCTTCCAAATAAATTCTCAAGCCATATATTTTGACAAATCACGAGCCTAGGAAACAAACATATGCTACAAAAACCTTGGTTTCTCCAATTTAATTACCGGTACATAAACTCAATCTTCTCAACCCTCGAACCACCATGCTTATTGAAATCACGAGTCAAATATCCCCTTTTTCTCTTCACCAGTACTCTAAATTTACTTGTATTTTACTGTGAGTGATGATGCACAGAACATAAACTAATATTCCATTTCATCAAGAAAAAGGATCATTGGCAACTTATTAGAAGCATTTGATTTTGTGCAGTGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTATGTCCAAACCCTCCGTAGATCTTCCTAGGAAGAACTTAGTTATTTTGATTTACCCGAAGTGAGATTACTCTACATGTAATAATCCTGCCAACATATGCTTATCTCCCAATCTAATATTGTTGTTCAGGTTCTGCTTCTTGTCTACCCACTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGGAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGGTATAATCTACGGTAAACTACACTCATTCTTGGATGTTTGAACAATTTAGACATATGTAATTGTTTGACTTGATGGAAACACAACTTAATATATATATATATAATATTGAAACACTTCACAAGAGATGGTGAATTGATTCTTTAGCATCTAGTGGTAGCCAGTTAGTTTCCTATGGAAAAAAAAGTGTTTTTTGACCGCTTAATCCTTGTGTTATGTCTTTATCATTATCATTATCTTCTTCTTTTTTTTTTTTTTCTTTTTTTTTTTCTTTCATTCACAT

mRNA sequence

GACCAATTTACCTTTACAAAAGTTTAATGTTTAAATTGAAATAAATCGACCAAACTTCTAAAGTTTAGGGATATAAATAGATTTGGAACTATGGAGTAACCTGTTTTCTATTTTTATAGTATAATGTTTAGTATCATCTCTCCAAATAAAAAGAGTATGCTGTTATTACAAGAGAGTAAAACAATAATGAGTGGAAGAGACAGGATGGTTATAAAGCCAAGTTGACTTAGTAGCCTATGTATTGAAAGTGGTGGCGCTCCAAACAAATTAGCCTTAATTTACTTTGGCTGGAAAAAAACATAATGGTTGGCAATTTATTGACATCATATCCCAAGTTGAGTCCAAAGAAACAAAAACAGAACCCCCCCAAGTTAATTCCATTCCGATTTCTCTACTCCCAGATGTGATTTTTACCAAAACCTGAGAGAAGAGAACCCATCAAAACAGAAACTTTCTATTTCTATTTCCATTTCCAATTTGAAGGTCAAGAAGTGGGTTACTGTTCAATTTATCAACAACACAATGTCTCGTCTATCGAATTTATATCTTCTAACTTACAATTCCCTCCAAGGTTTTGGCTGGATGGTTTCTCTTTACAGACTTGTGGGAGATTTTGCAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTTTCTTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACGGTTGCCTTCTGTGTTCATCACTTTCCTAGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAATTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAATCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCACTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGGAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGGTATAATCTACGGTAAACTACACTCATTCTTGGATGTTTGAACAATTTAGACATATGTAATTGTTTGACTTGATGGAAACACAACTTAATATATATATATATAATATTGAAACACTTCACAAGAGATGGTGAATTGATTCTTTAGCATCTAGTGGTAGCCAGTTAGTTTCCTATGGAAAAAAAAGTGTTTTTTGACCGCTTAATCCTTGTGTTATGTCTTTATCATTATCATTATCTTCTTCTTTTTTTTTTTTTTCTTTTTTTTTTTCTTTCATTCACAT

Coding sequence (CDS)

ATGTCTCGTCTATCGAATTTATATCTTCTAACTTACAATTCCCTCCAAGGTTTTGGCTGGATGGTTTCTCTTTACAGACTTGTGGGAGATTTTGCAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTTTCTTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACGGTTGCCTTCTGTGTTCATCACTTTCCTAGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAATTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAATCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCACTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGGAAGCAGCATAAGAAGAAGAGAAACTAA

Protein sequence

MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN*

Homology

[Close]

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27
Identity = 77/218 (35.32%), Postives = 128/218 (58.72%), Query Frame = 0


Query: 4   LSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGA 63
           L+  YL+ YN +   GW+V    LV  + A  S    Y S  + + F QT A LE++H A
Sbjct: 37  LTTAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 96

Query: 64  VGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNC 123
           +G+VP+ V+L  +Q   RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + 
Sbjct: 97  IGIVPSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSL 156

Query: 124 LGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSY 183
           L   P+ + + RYT FI+LYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    Y
Sbjct: 157 LNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDY 216

Query: 184 YNFIRVLLLVYPLLFLKLYLYLFKQRRSKLG--KQHKK 216
           Y F+ ++++ Y  LF +LY ++  QRR  L   ++HKK
Sbjct: 217 YAFLILIMISYIPLFPQLYFHMIHQRRKILSHTEEHKK 252

[Close]

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot
Match: Q6Y1H2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=HACD2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.9e-27
Identity = 76/218 (34.86%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 4   LSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGA 63
           L+  YL+ YN +   GW+V    LV  + A  S    Y S  + + F QT A LE++H A
Sbjct: 37  LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 96

Query: 64  VGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNC 123
           +G+VP+ V+L   Q   RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + 
Sbjct: 97  IGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSL 156

Query: 124 LGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSY 183
           L   P+ + + RYT FI+LYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    Y
Sbjct: 157 LNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDY 216

Query: 184 YNFIRVLLLVYPLLFLKLYLYLFKQRRSKLG--KQHKK 216
           Y F+ ++++ Y  +F +LY ++  QRR  L   ++HKK
Sbjct: 217 YAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 252

[Close]

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot
Match: Q5RBK3 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=HACD2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.9e-27
Identity = 76/218 (34.86%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 4   LSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGA 63
           L+  YL+ YN +   GW+V    LV  + A  S    Y S  + + F QT A LE++H A
Sbjct: 38  LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 97

Query: 64  VGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNC 123
           +G+VP+ V+L   Q   RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + 
Sbjct: 98  IGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSL 157

Query: 124 LGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSY 183
           L   P+ + + RYT FI+LYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    Y
Sbjct: 158 LNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDY 217

Query: 184 YNFIRVLLLVYPLLFLKLYLYLFKQRRSKLG--KQHKK 216
           Y F+ ++++ Y  +F +LY ++  QRR  L   ++HKK
Sbjct: 218 YAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 253

[Close]

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 76/218 (34.86%), Postives = 126/218 (57.80%), Query Frame = 0


Query: 4   LSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGA 63
           ++  YL+ YN +   GW+V    LV  + A  S    Y S    + F QT A LE++H A
Sbjct: 37  VATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCA 96

Query: 64  VGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNC 123
           +G+VP+ V+L   Q   RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + 
Sbjct: 97  IGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSL 156

Query: 124 LGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSY 183
           L   P+ + + RYT FI+LYP+GVT GE+  +Y A+PF+ +  LY+    + +++    Y
Sbjct: 157 LNHLPYIIKWARYTLFIVLYPMGVT-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDY 216

Query: 184 YNFIRVLLLVYPLLFLKLYLYLFKQRRSKLG--KQHKK 216
           + F+ ++++ Y  LF +LY ++  QRR  L   ++HKK
Sbjct: 217 HAFLILIMISYIPLFPQLYFHMIHQRRKVLSHTEEHKK 252

[Close]

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot
Match: Q9N1R5 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Ovis aries OX=9940 GN=HACD1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23
Identity = 67/209 (32.06%), Postives = 113/209 (54.07%), Query Frame = 0


Query: 4   LSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGA 63
           L+ ++L  YN     GW+V    +V  +    +  G Y S  + + F QT A LE++H  
Sbjct: 71  LATIWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCL 130

Query: 64  VGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNC 123
           +G+VPT VL+  +Q   R+  V  V   +  IQ   SV +  +AW+++E+ RY  +  + 
Sbjct: 131 IGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSL 190

Query: 124 LGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFD---YLPLSYY 183
           L   P+++ + RY  FIILYP+GV  GE+  +Y A+P++ K  +++        +   YY
Sbjct: 191 LDHLPYFIKWARYNFFIILYPVGVA-GELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYY 250

Query: 184 NFIRVLLLVYPLLFLKLYLYLFKQRRSKL 210
            F+ + +  Y  LF +LY ++ +QRR  L
Sbjct: 251 YFLLITMASYIPLFPQLYFHMLRQRRKVL 278

[Close]

BLAST of CsGy6G016300 vs. NCBI nr
Match: XP_004148217.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357.1 hypothetical protein Csa_023054 [Cucumis sativus])

HSP 1 Score: 427 bits (1098), Expect = 1.14e-150
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. NCBI nr
Match: XP_008448368.1 (PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo] >KAA0061952.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa] >TYK23978.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 424 bits (1089), Expect = 2.67e-149
Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDF ATKSTSGAYSSTGELVCFLQTAAFLEVI
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRYFHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. NCBI nr
Match: XP_038900764.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida])

HSP 1 Score: 401 bits (1031), Expect = 1.86e-140
Identity = 203/218 (93.12%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSN YLLTYNSLQ  GWMVSLYRLVG+FAATKSTSGAYSSTGELVCFLQ AAFLE+I
Sbjct: 1   MSRLSNFYLLTYNSLQALGWMVSLYRLVGNFAATKSTSGAYSSTGELVCFLQAAAFLEII 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
            NCLGVCPFWLTYLRYTAFI+LYP GVTIGEMWLMYQAIPFM+KKNLYADVF YLP SYY
Sbjct: 121 FNCLGVCPFWLTYLRYTAFIVLYPTGVTIGEMWLMYQAIPFMVKKNLYADVFAYLPFSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYL+LFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLHLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. NCBI nr
Match: XP_022148455.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia])

HSP 1 Score: 385 bits (988), Expect = 6.66e-134
Identity = 193/218 (88.53%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSN YLLTYNSLQ FGW +SLYRLVG FAATKST GAYSS GEL+CFLQTAAFLE+I
Sbjct: 1   MSRLSNSYLLTYNSLQAFGWTISLYRLVGSFAATKSTIGAYSSVGELICFLQTAAFLEII 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHF++AVVR+L E+Q LP VFITF+AWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVF YLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           N IRVLLLVYP  FLKLYL+LFKQRRSKLGKQH+KKRN
Sbjct: 181 NTIRVLLLVYPFFFLKLYLHLFKQRRSKLGKQHQKKRN 218

[Close]

BLAST of CsGy6G016300 vs. NCBI nr
Match: XP_022947850.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita moschata] >KAG6605485.1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375 bits (963), Expect = 4.30e-130
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSN YLLTYNSLQ FGW +SLYRL+  F ATKSTSGAYSS GEL+CFLQTAAFLE+I
Sbjct: 1   MSRLSNFYLLTYNSLQAFGWTISLYRLLDSFVATKSTSGAYSSAGELICFLQTAAFLEII 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGA+GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+Q+LPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGV  FWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIK NLYAD F YLP SYY
Sbjct: 121 LNCLGVSLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           N I+VLL VYPL FLKLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL
Match: A0A0A0KG29 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G303230 PE=3 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 5.50e-151
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL
Match: A0A5D3DKD0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00410 PE=3 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 1.29e-149
Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDF ATKSTSGAYSSTGELVCFLQTAAFLEVI
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRYFHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL
Match: A0A1S3BJI8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LOC103490580 PE=3 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 1.29e-149
Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDF ATKSTSGAYSSTGELVCFLQTAAFLEVI
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRYFHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL
Match: A0A6J1D2Y7 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=3673 GN=LOC111017094 PE=3 SV=1)

HSP 1 Score: 385 bits (988), Expect = 3.22e-134
Identity = 193/218 (88.53%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSN YLLTYNSLQ FGW +SLYRLVG FAATKST GAYSS GEL+CFLQTAAFLE+I
Sbjct: 1   MSRLSNSYLLTYNSLQAFGWTISLYRLVGSFAATKSTIGAYSSVGELICFLQTAAFLEII 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGAVGLVPTGVLLPLMQWGGRVHF++AVVR+L E+Q LP VFITF+AWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGVCPFWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVF YLPLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           N IRVLLLVYP  FLKLYL+LFKQRRSKLGKQH+KKRN
Sbjct: 181 NTIRVLLLVYPFFFLKLYLHLFKQRRSKLGKQHQKKRN 218

[Close]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL
Match: A0A6J1G819 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111451609 PE=3 SV=1)

HSP 1 Score: 375 bits (963), Expect = 2.08e-130
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           MSRLSN YLLTYNSLQ FGW +SLYRL+  F ATKSTSGAYSS GEL+CFLQTAAFLE+I
Sbjct: 1   MSRLSNFYLLTYNSLQAFGWTISLYRLLDSFVATKSTSGAYSSAGELICFLQTAAFLEII 60

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHA 120
           HGA+GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+Q+LPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 121 LNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180
           LNCLGV  FWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIK NLYAD F YLP SYY
Sbjct: 121 LNCLGVSLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYY 180

Query: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218
           N I+VLL VYPL FLKLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of CsGy6G016300 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 218.0 bits (554), Expect = 7.5e-57
Identity = 105/193 (54.40%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 22  VSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVPTGVLLPLMQWGGR 81
           +SL  ++  F + K+   AY+S G L+   QTAA LEV+HGA+G+VP+G L PLMQW GR
Sbjct: 73  ISLLIILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGR 132

Query: 82  VHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFII 141
            HF++A+V Q+ E+Q  P + IT +AW + E+IRY H+A  CLG CP+WLTYLRYT FI+
Sbjct: 133 THFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIV 192

Query: 142 LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYL 201
           +YP G+ +GE+ +MY+A+P++ ++NLYA+ F   P SYY+F+  +LLVYP L+LKLYL L
Sbjct: 193 IYPTGL-VGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQL 252

Query: 202 FKQRRSKLGKQHK 215
           FKQR+SKLGK  K
Sbjct: 253 FKQRKSKLGKSKK 264

[Close]

BLAST of CsGy6G016300 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 84.7 bits (208), Expect = 9.9e-17
Identity = 67/220 (30.45%), Postives = 111/220 (50.45%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           +S +  +YL  YN +   GW   LY  +     T      Y +  + +   QTAA LE++
Sbjct: 5   LSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEIL 64

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRY-FHH 120
           HG VGLV + V   L Q G R+     ++    E++    V    ++WS++E+IRY F  
Sbjct: 65  HGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFG 124

Query: 121 ALNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYL 180
               LG  P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+    ++ ++ 
Sbjct: 125 FKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMPNILNFS 184

Query: 181 PLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKK 216
              +Y  I VL +  P     +Y Y+  QR+  L K  ++
Sbjct: 185 FDFFYATILVLAIYVP-GSPHMYRYMLGQRKRALSKSKRE 221

[Close]

BLAST of CsGy6G016300 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 56/169 (33.14%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 52  QTAAFLEVIHGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLS 111
           QTAA LE++HG VGLV + V   L Q G R+     ++    E++    V    ++WS++
Sbjct: 30  QTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSIT 89

Query: 112 EVIRY-FHHALNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA- 171
           E+IRY F      LG  P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+ 
Sbjct: 90  EIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSV 149

Query: 172 ---DVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKK 216
              ++ ++    +Y  I VL +  P     +Y Y+  QR+  L K  ++
Sbjct: 150 RMPNILNFSFDFFYATILVLAIYVP-GSPHMYRYMLGQRKRALSKSKRE 196

[Close]

BLAST of CsGy6G016300 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 67/229 (29.26%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVI 60
           +S +  +YL  YN +   GW   LY  +     T      Y +  + +   QTAA LE++
Sbjct: 5   LSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEIL 64

Query: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLS--------- 120
           HG VGLV + V   L Q G R+     ++    E++    V    ++WS++         
Sbjct: 65  HGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTWIV 124

Query: 121 EVIRY-FHHALNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYA- 180
           E+IRY F      LG  P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+ 
Sbjct: 125 EIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSV 184

Query: 181 ---DVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKK 216
              ++ ++    +Y  I VL +  P     +Y Y+  QR+  L K  ++
Sbjct: 185 RMPNILNFSFDFFYATILVLAIYVP-GSPHMYRYMLGQRKRALSKSKRE 230

The following BLAST results are available for this feature:

BLAST of CsGy6G016300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KIP8	3.5e-27	35.32	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HA...	[more]
Q6Y1H2	7.9e-27	34.86	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=...	[more]
Q5RBK3	7.9e-27	34.86	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=...	[more]
Q9D3B1	1.8e-26	34.86	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN...	[more]
Q9N1R5	5.3e-23	32.06	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Ovis aries OX=9940 GN=HA...	[more]

BLAST of CsGy6G016300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148217.1	1.14e-150	100.00	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357...	[more]
XP_008448368.1	2.67e-149	98.62	PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucu...	[more]
XP_038900764.1	1.86e-140	93.12	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida]	[more]
XP_022148455.1	6.66e-134	88.53	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia]	[more]
XP_022947850.1	4.30e-130	86.70	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita mosch...	[more]

BLAST of CsGy6G016300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG29	5.50e-151	100.00	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN...	[more]
A0A5D3DKD0	1.29e-149	98.62	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BJI8	1.29e-149	98.62	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1D2Y7	3.22e-134	88.53	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=367...	[more]
A0A6J1G819	2.08e-130	86.70	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662...	[more]

BLAST of CsGy6G016300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59770.1	7.5e-57	54.40	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.1	9.9e-17	30.45	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.2	2.1e-14	33.14	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.3	2.1e-14	29.26	Protein-tyrosine phosphatase-like, PTPLA	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PFAM	PF04387	PTPLA	coord: 52..211 e-value: 1.7E-44 score: 151.4
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PANTHER	PTHR11035	PTPLA DOMAIN PROTEIN	coord: 4..215
None	No IPR available	PANTHER	PTHR11035:SF35	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE	coord: 4..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016300.2	CsGy6G016300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030497	fatty acid elongation
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0018812	3-hydroxyacyl-CoA dehydratase activity
molecular_function	GO:0102343	3-hydroxy-arachidoyl-CoA dehydratase activity
molecular_function	GO:0102344	3-hydroxy-behenoyl-CoA dehydratase activity
molecular_function	GO:0102345	3-hydroxy-lignoceroyl-CoA dehydratase activity
molecular_function	GO:0102158	very-long-chain 3-hydroxyacyl-CoA dehydratase activity