CsGy6G016175 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016175
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 15236877 .. 15240591 (+)
RNA-Seq Expression	CsGy6G016175
Synteny	CsGy6G016175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGAAAGAATGAACAAAGCAATTTATGGCGTCACAAGCAGGAACCTCAAAATAGTTATGCACTATCATTTTCTTCCTATGACGTTTGTTGCTATCCTGCAGTTATGGTAGGCAACTGTAATACATTAACAGTTTATGGATTGCTTACATATATCATAGTTTGAAGTTGTTGCTATCTTGCAGTTATGGTAGCAATTAAGATGTTTTTTGTATATTTGTTTTATTAGATGTAGGATGAAATATAGTTTTGTTTTTGTAAGTTGTAATTGTTTTGGTCATGTAAAGTTGTTCTAAGGAGTTTTGTTTTTAAGTTGCTATGTTTTCGTTGTAGAGAGGGGTTCATGAACATGTGTTTATATTTTAAAGTTGTTAGATTTTGGTTGTTTTTGTTATTATTTTGGTTTTATAAATTATTTAGTATGTAAGTTGTTATTTTATTTGGTTATAGAGAAAATTATATAAACTGTTATTGTAAGTTTATTTTTTAGTTAAGGTAGGTAAAGTTTTTTTTTTATATATATATATGGAATATATTTCTATTGTTTTCTGTCATTTGTTTTTGAGGTTCAACTTTCAAGAAAGAAATGTCAAACAAATTAGTGGTTATGTACTATTTATGTGTTTATTGTAAATTTTTGTTATTTTTTATGATTTTGTCATTTTTATTTTCTTATATTTCTATAGTTTGAATTGTGCTTAGTTACAGATCAAAAGCAATGTGAAAAAATAATACAAATATAAAATATGTATTTTAAAGGATAGACTTTTGCCCACAACATCATTTTAAAAGCGTCGACATTTCATGGATTTGTCGACAAAAGTTATAGCTGTCGGCGTAACAGATCAACATTGTCGGTAAGAAATATTGTCGCTAATACAAGGATATGCCGATGACATTTTTACACCGTCGGCAAAATATACCCACGAATTATTGCGAATATCCCTTTCGCCGACGGTTAATTTCTCTTGTCGCCATAGTTTCGTTGGTTCAATTTCATCGATAGTTCATGTTTTCATCGTCGGTGGAGGATCTTCCGATGGACCTACGCCGATGGTGTGTGCTAACGACTTATTTTCGTTGGCAAAAGAAAAACTGACAAGTTTTTGAAGATTTGCCGACGATATTTGTCATCGGCAAATGGTAAATTTCTTGTAGTATAACCGATTTTAACTTTTGGTTCAATATTCTTTTGTTATGTTAATATATAACGCATAATTTCGTTAGATGGTTGAAATGAAATTCATCTTATTTTCATAACAAATGGCTACATAATCACATGCTTGTCTTTAACTTATTTGAAGATATAGTAATGTACAAGGTTGTTACACATCTGGATTAGTTCTTACAAGTAATTTATCTTCTTCTCCCTTTTATGTCAATGCATTATAATTATTTTAGTACATATCTTTAGAGGTCACCTCTTAATCTATAGTAATTACTATACAAATTTTAGTTTAAAATTTTATACATATATACACACATGCATTTTCACTAAAGTCATGACTTTATTTTTGTTCTTTCACTTCAATCTATTTTTTTCTCCTACTTTAATTTCAATATTGATTTGCTGATTTGCTCCTAAAGATAATGCTGATTTGCTCTATATTGAGGTTTGTTTTTGCCATGTTCTCTGTTTGTAGGATTGTTTTAGTCGTGTTTCTTTCTTTCTTTCTTTGGTTTGTTTTGTGTGGCGTTTTGTCCTATTGTGTGCTCTGACTATGGATTGTGAGATTTCCTTGTTGTTTAATGTATACATTTTTTAAAAAAAAGATGAACAAAGTAATATATTATAAAATGATTTTTTTTTTGTAGTGGAAGGGGTTATTGCTCATACAGAAAACTTACCATCCATTACATGGCAAAGTGTATACCGTGCCTCATTCACAACTCAAACTCCCTTTTGTTTTATACTTTAAGATATTTTTGATTTTGATAGGTTGGTTTTTTCTTTAATCTAACGTAACTTTCCATTCAAACACATTTAAAGTTTCTAACCCTTTTAGTTCGTGATTTGATGTTATTTTAAATTTTAAATTTTTATTTAATTATTTATGAAAAGTTTTAGACTATCCGTGACATCTATAAAAGAAAAAGCAATATAATTTTAAGATTATTTTCGTACGTGATAAACGGATCAACTTATTTATAAATATAGTAATAGTAAATAAAAAAATCTCAACCCATTGAAAATTTTATTTATGTTTGAAAATATTTGGGTATGTTTTCATTTAAAGCAATATTTCCAAATAACAAATTATAAAGAGTTGAAATATTCTATCTACCACATTCATTCTTACAAGAAGACAACAATAATAAAAGTTGGTAAAAGTATTTTTGTAGGCACATATATAAACACACACGTAAAATAATAATAAAAACAAGTAAATACAAATAATGGGGATAGGAATTGTATTCTCCCATTCTCTATTCCCTCCTCGTCTCCGACCTAAACAAGGAGTCATAAGCCTCACAATAAAAGCTTATCTCTCTGTTTTTTAGTTTTCCTCCATCATCCTCCTACAGTTGTACTCAAATATAATAAAAAAATGTGTAAATAATATTTTGGTTCGTGTATTTTTTACGTTGATTAGTATTCTTTATATTTTCAATATCTTCATTTTGATTCCTCTATTTTTAACTTTGGTTCATCTTCGTCGTTTTATTTTAATTTATAAGGAGTACGAGGATAGTTACTTTTTAAGTTGAAAGACTAAAATAAAATCAAATTTCGAGCGGAAACTAAAAGTAAAATAAACAATAAATAAATATATATATATATAAATAAAATTAAAAGGTATAGGTTTAATAGTAATCTTATTTGTTAAAAATAAAAATGAAAGGGAGTATAGTTTTGGTTGTGGGTGCCAAATTATGGGCCAAAGAAGAAAGAAGAAGTAAGGAGAAAGGGCTTTAGGCTTTAGGTCCACAAAAACCACCAATCACAAAACGAAGGGGAAAAAGTGAAAAAAAAAGCCGAAGGCCAACGAAGACGGTTCGCCGCTGCCATCACCGTCGCATACCGACTTTCTTCATCCTCTCTCTTCTCAATTAGGGCACACAACTACGATCTTTCTTTCTCAACCGGACGTCTTTCCGATCTGCTTTTCAGGTTTGATTTCATTTCTGATCCAGATTTACACATTTCGTTTTGCCTTCCGATCTTTATTTTTCTTCCTTTTATCTATCAATGCTGCTCCAAGGGTTTCCTCACATACTCTCGAGTTCTTTTCTTTTGTGGTTCTACTCTGAAAAGGATTATTTGAATAGAATCAGTTCAGAAACACTACGACAATTCTCATTTTGTTTATTTGTTTTAGTTGAGGGATAATCATTCATTTTTAGTAGATGTAATTACCTTTTTCTGTGTGTTAGACGGCGATATCGTGTTTGTCTTTGGAAGATTTTTGAAGAGTTTCTGAGTCGTTGGTTGCTTCTATAGATATGCGTTACTTTACTAGTTACAGTCCTTGATTTTGTTATGGAGGTTTGGATTTCATTTTACTTTTATTATCTTGTTTGGAGGCTGCCTAGACTACAGTGACTACGCTTTTCTAAAAGCAATCTGAGAATTGTACACGTTAGAAGTATAATATATGTACTCCTTGTTTTTCATATTATACTGGCTCTGCAGCCACATTGGGTTTAGTTTTGGTGTTTTTATCGTACTTATGGGCTTACTCTTACACTATACTATTATTTTCAGGCTGTAA

mRNA sequence

ATGTATAGAAAGAATGAACAAAGCAATTTATGGCGTCACAAGCAGGAACCTCAAAATAGTTATGCACTATCATTTTCTTCCTATGACGTTTGTTGCTATCCTGCAGTTATGGTCCACAAAAACCACCAATCACAAAACGAAGGGGAAAAAGTGAAAAAAAAAGCCGAAGGCCAACGAAGACGGTTCGCCGCTGCCATCACCGTCGCATACCGACTTTCTTCATCCTCTCTCTTCTCAATTAGGGCACACAACTACGATCTTTCTTTCTCAACCGGACGTCTTTCCGATCTGCTTTTCAGGCTGTAA

Coding sequence (CDS)

ATGTATAGAAAGAATGAACAAAGCAATTTATGGCGTCACAAGCAGGAACCTCAAAATAGTTATGCACTATCATTTTCTTCCTATGACGTTTGTTGCTATCCTGCAGTTATGGTCCACAAAAACCACCAATCACAAAACGAAGGGGAAAAAGTGAAAAAAAAAGCCGAAGGCCAACGAAGACGGTTCGCCGCTGCCATCACCGTCGCATACCGACTTTCTTCATCCTCTCTCTTCTCAATTAGGGCACACAACTACGATCTTTCTTTCTCAACCGGACGTCTTTCCGATCTGCTTTTCAGGCTGTAA

Protein sequence

MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRRRFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL*

Homology

[Close]

BLAST of CsGy6G016175 vs. NCBI nr
Match: KGN47346.1 (hypothetical protein Csa_022969 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 6.82e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR 60
           MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR
Sbjct: 1   MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR 60

Query: 61  RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL 101
           RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL
Sbjct: 61  RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL 101

[Close]

BLAST of CsGy6G016175 vs. ExPASy TrEMBL
Match: A0A0A0KHU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302140 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 3.30e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR 60
           MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR
Sbjct: 1   MYRKNEQSNLWRHKQEPQNSYALSFSSYDVCCYPAVMVHKNHQSQNEGEKVKKKAEGQRR 60

Query: 61  RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL 101
           RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL
Sbjct: 61  RFAAAITVAYRLSSSSLFSIRAHNYDLSFSTGRLSDLLFRL 101

The following BLAST results are available for this feature:

BLAST of CsGy6G016175 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G016175 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47346.1	6.82e-66	100.00	hypothetical protein Csa_022969 [Cucumis sativus]	[more]

BLAST of CsGy6G016175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU5	3.30e-66	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302140 PE=4 SV=1	[more]

BLAST of CsGy6G016175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016175.1	CsGy6G016175.1	mRNA