CsGy6G016165 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAACGAAAAACCCATCCGTTTTCTTTTCCCTATAATATTCTCTTTCACATTCCTTTTATCTTTCTTCTACCTATAAATAAAAACCGTAACCATTTTCTCAAATCCCTAAAATCCACCATGGCCTCCGTTTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCACGCGCCAGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAGAGAATCTCTCGCCGGAAAAAGAAGAAGACGGCGGCGTCTGAGTCCAGCGACGGCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTGTTCCGACGGTTGTTATCGTGCACCGCTAAAGTCGACGTCGCCGATACTATGCGAGAGGTTCATTAGTTAATTTTTTTTTCTCTTTTTCTTTTGGTTAAATTGCAAATTTCTCCTTTGGAAAAAAAAAGTGTAGGGACTAAATTCTAAAACTTAAAATTTTAGGGGTGAATTTGTAATTTAAAATTTCATTTTTCCTTTTTGGTTCATAGTCGTCGATGGAATTCAGCGAAGAAGAGGTGGGGATGGTGTACGGACATATTATTATGTAAATTAGATTTATTTTTTAAAAGTTTTTTTTAGAGAGATAATATTTTTTTATTTATAGTTTTCATGTGGAA CAGAAACGAAAAACCCATCCGTTTTCTTTTCCCTATAATATTCTCTTTCACATTCCTTTTATCTTTCTTCTACCTATAAATAAAAACCGTAACCATTTTCTCAAATCCCTAAAATCCACCATGGCCTCCGTTTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCACGCGCCAGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAGAGAATCTCTCGCCGGAAAAAGAAGAAGACGGCGGCGTCTGAGTCCAGCGACGGCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTGTTCCGACGGTTGTTATCGTGCACCGCTAAAGTCGACGTCGCCGATACTATGCGAGAGTCGTCGATGGAATTCAGCGAAGAAGAGGTGGGGATGGTGTACGGACATATTATTATGTAAATTAGATTTATTTTTTAAAAGTTTTTTTTAGAGAGATAATATTTTTTTATTTATAGTTTTCATGTGGAA ATGGCCTCCGTTTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCACGCGCCAGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAGAGAATCTCTCGCCGGAAAAAGAAGAAGACGGCGGCGTCTGAGTCCAGCGACGGCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTGTTCCGACGGTTGTTATCGTGCACCGCTAAAGTCGACGTCGCCGATACTATGCGAGAGTCGTCGATGGAATTCAGCGAAGAAGAGGTGGGGATGGTGTACGGACATATTATTATGTAA MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQMYLRSYTFSREEEHAPETKTNKCFAKVGMRQRISRRKKKKTAASESSDGDEKIRKSSRLKKAKEISCAALTSVFRRLLSCTAKVDVADTMRESSMEFSEEEVGMVYGHIIM* Homology
BLAST of CsGy6G016165 vs. NCBI nr
Match: KAE8647064.1 (hypothetical protein Csa_023018 [Cucumis sativus]) HSP 1 Score: 321 bits (822), Expect = 2.82e-110 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CsGy6G016165 vs. NCBI nr
Match: XP_008463974.1 (PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]) HSP 1 Score: 297 bits (760), Expect = 8.30e-101 Identity = 157/168 (93.45%), Postives = 160/168 (95.24%), Query Frame = 0
BLAST of CsGy6G016165 vs. NCBI nr
Match: XP_004148240.1 (uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 284 bits (726), Expect = 6.82e-96 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsGy6G016165 vs. NCBI nr
Match: KAA0035268.1 (uncharacterized protein E6C27_scaffold228G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 272 bits (696), Expect = 2.73e-91 Identity = 144/150 (96.00%), Postives = 145/150 (96.67%), Query Frame = 0
BLAST of CsGy6G016165 vs. NCBI nr
Match: XP_038902301.1 (uncharacterized protein LOC120088935 [Benincasa hispida]) HSP 1 Score: 258 bits (660), Expect = 8.38e-86 Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of CsGy6G016165 vs. ExPASy TrEMBL
Match: A0A1S3CKF0 (uncharacterized protein LOC103501967 OS=Cucumis melo OX=3656 GN=LOC103501967 PE=4 SV=1) HSP 1 Score: 297 bits (760), Expect = 4.02e-101 Identity = 157/168 (93.45%), Postives = 160/168 (95.24%), Query Frame = 0
BLAST of CsGy6G016165 vs. ExPASy TrEMBL
Match: A0A0A0KET2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 284 bits (726), Expect = 3.30e-96 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsGy6G016165 vs. ExPASy TrEMBL
Match: A0A5A7SXD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00590 PE=4 SV=1) HSP 1 Score: 272 bits (696), Expect = 1.32e-91 Identity = 144/150 (96.00%), Postives = 145/150 (96.67%), Query Frame = 0
BLAST of CsGy6G016165 vs. ExPASy TrEMBL
Match: A0A6J1G522 (uncharacterized protein LOC111450987 OS=Cucurbita moschata OX=3662 GN=LOC111450987 PE=4 SV=1) HSP 1 Score: 236 bits (601), Expect = 3.95e-77 Identity = 127/151 (84.11%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of CsGy6G016165 vs. ExPASy TrEMBL
Match: A0A6J1L3K0 (uncharacterized protein LOC111499579 OS=Cucurbita maxima OX=3661 GN=LOC111499579 PE=4 SV=1) HSP 1 Score: 231 bits (589), Expect = 2.75e-75 Identity = 125/152 (82.24%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CsGy6G016165 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26 Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of CsGy6G016165 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 7.1e-15 Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 0
BLAST of CsGy6G016165 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 3.0e-13 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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