CsGy6G015730 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATATCTCTGTTTTTCCATTTCCAAACGAAACCAAACCAAACCCTCCATTTCTTCTCCTTCTTCTTCTCCGTTTCTTTACTCCGATCATCCCAAATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTTCAGGTCTTTTTCATCCGCCTTTTTAATTTCTCTCATGTTTTGGTCTCTGTTTTATTTTAACTCTCCAATTTCTAACTGTTCGGTTATTTTGCAAGATTGAATCAGTGAATTAGGGCTGAAAATGTGCATTCATTTGTTAGTTGTTACTCACTAACGACCTTGTTGCTCTTCCATTTTTGTTTTACACATTAAAAAACTATGCAGTGAGATTTGGAGCATGATGAAATTAATTCTTAAGATTTTGTTTGATCCTACCCACTTAACCTACTAAATATCTCCATTTGGAATTCTATGCTGAACTTTAAATTATTCACATTACTTGCAAAACAAAATAACTTTTTAAACTTCCATAATTTGAAAAGTAGCCAAACCAATATGTAATGTAATTATATCAATACTTTAACACTCCTACGCTCCAGTAACTTTTTACACTCATATGTGTTTATAATGACTATGACAGTACCATATGTACCAACCAAAAAACTTAGGTTGATGGAGTTCTTTCCAGCAAATTTGATTATATTTGTACTTTTAACTTTCGTATGCGTCCCATTATGACTATGCCATTACCATTACTTCATATTCTCTTGTCAACCCAAAAGCTTAAAACTGATGGATTCTTTCAAGTAAACTTAATTAATACCGATGCTTCATTTCCCATTTTCCCTTGTTTGAATAGTATAATTCACAATACAAGATCCCTATGGGACAACCCACTTGTCATGAACTGAAATTCTTTATTGGGGGATTGATTAAACAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTCTATTTAGTTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCATTGAAGTTTCTCCAAACTCTTTTGAGAGCCAAATTTGAGGTTGTGGGTAGGAGAAACTTTGCGGACAGAATACAACACAAATTTTAGGCGATTTGGTTTGATTCGTTTTCATTTTTATGTTTTCAAAAACAAAAAATATAAAAGCAAAATTGAAACTTATTTGATATATTTGAATTTTAAATAAAAACCATAAGCGTTTTTTAATAGAATGAAAAAGAAAGAATTTGTTTTTATTTTTGGTTAAACTATTTATTTTTCAAAATAATTTTTGGATCACAAACTAAACCAGCTTTTACTTTTTGAAATGGAAAACCAAAGCTTTATTAGGGATGTGTCTTTATCCATGATCTTTGTGTTTAGGCCAAAAAAAGGAAAAGTAAAGCATAGATGCCTTCGGCATAATCAATGTGAAAGAGATGTATACCAATTGCTTAACCATCTCTACTTCCAAATAAAATATTCAATAACAATTTAGATATTTTCATAAATTCAATACTTTCATATTTGATATTATTGTAAAGACC ATTTATATCTCTGTTTTTCCATTTCCAAACGAAACCAAACCAAACCCTCCATTTCTTCTCCTTCTTCTTCTCCGTTTCTTTACTCCGATCATCCCAAATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTTCAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTCTATTTAGTTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCATTGAAGTTTCTCCAAACTCTTTTGAGAGCCAAATTTGAGGTTGTGGGTAGGAGAAACTTTGCGGACAGAATACAACACAAATTTTAGGCGATTTGGTTTGATTCGTTTTCATTTTTATGTTTTCAAAAACAAAAAATATAAAAGCAAAATTGAAACTTATTTGATATATTTGAATTTTAAATAAAAACCATAAGCGTTTTTTAATAGAATGAAAAAGAAAGAATTTGTTTTTATTTTTGGTTAAACTATTTATTTTTCAAAATAATTTTTGGATCACAAACTAAACCAGCTTTTACTTTTTGAAATGGAAAACCAAAGCTTTATTAGGGATGTGTCTTTATCCATGATCTTTGTGTTTAGGCCAAAAAAAGGAAAAGTAAAGCATAGATGCCTTCGGCATAATCAATGTGAAAGAGATGTATACCAATTGCTTAACCATCTCTACTTCCAAATAAAATATTCAATAACAATTTAGATATTTTCATAAATTCAATACTTTCATATTTGATATTATTGTAAAGACC ATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTTCAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGA MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNSLWEPLWT* Homology
BLAST of CsGy6G015730 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 211.5 bits (537), Expect = 9.0e-54 Identity = 124/225 (55.11%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 120/193 (62.18%), Postives = 145/193 (75.13%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37 Identity = 87/162 (53.70%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 7.7e-37 Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0
BLAST of CsGy6G015730 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus]) HSP 1 Score: 391 bits (1005), Expect = 4.33e-137 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 376 bits (965), Expect = 5.06e-131 Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida]) HSP 1 Score: 341 bits (875), Expect = 2.38e-117 Identity = 185/201 (92.04%), Postives = 191/201 (95.02%), Query Frame = 0
BLAST of CsGy6G015730 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima]) HSP 1 Score: 327 bits (839), Expect = 7.55e-112 Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of CsGy6G015730 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327 bits (838), Expect = 1.07e-111 Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1) HSP 1 Score: 391 bits (1005), Expect = 2.10e-137 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1) HSP 1 Score: 376 bits (965), Expect = 2.45e-131 Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1) HSP 1 Score: 376 bits (965), Expect = 2.45e-131 Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1) HSP 1 Score: 327 bits (839), Expect = 3.66e-112 Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of CsGy6G015730 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1) HSP 1 Score: 327 bits (839), Expect = 3.66e-112 Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of CsGy6G015730 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 ) HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55 Identity = 124/225 (55.11%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of CsGy6G015730 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 211.1 bits (536), Expect = 8.4e-55 Identity = 120/193 (62.18%), Postives = 145/193 (75.13%), Query Frame = 0
BLAST of CsGy6G015730 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38 Identity = 87/162 (53.70%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of CsGy6G015730 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 155.2 bits (391), Expect = 5.5e-38 Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0
BLAST of CsGy6G015730 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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