CsGy6G015435 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G015435
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	HECT-type E3 ubiquitin transferase
Location	Gy14Chr6: 14175408 .. 14177814 (-)
RNA-Seq Expression	CsGy6G015435
Synteny	CsGy6G015435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTGCATACCAAAGAAAGAAAAGAGAATTGCAAATGCAAAACGTAAAAAAGTGAGACAATCAAGAGCTATAGAAAAAAACAAACAACACATGCAATATACATACAAAGAGCCATCTTGGTTAGGTCAAGTAAAATGTGTTGAGTTCCCTAACTATCAGAGGCAGAAAAGATGATAGAAAAAATCCAGAATTTACACGAAGAAGTCCACAATCACCTAAAAGAAACAACTCAGTCCTACAAAGACGCAACAGACAGAAAAAGAAGACAAACTACCTTTACCAAGGGAGATTTAGTAATGATTCACCTAAGAAAAAATCGATTTCCAACCGAAACATACAACAAACTAAAAGACAGACAATTAGGACCATTCCGTGTCCTAAAGAGGATCGGAGATAATGCTTACAAAATAGAACTACCACCAGACTTACACATTCATTATGTTTTTAATGTCGCAGACCTAAAACAATACTATGCCCTAGATGATTTCTGCCTGGCCAACTAATTCTCAATAAATACCCCTTCTCTTAGCCATTATTGGCAGAGAATTCATTGCGAGAAATAATTCTACTTTGATTTACGTCAAATTATATGTTGTTTTTTATTGACCATTTTTACCTTCAGAAACTTCTTACCTTTGCAGCATATTCATTATTTTGCACCATAATTCCTTTTGTTTTAATATGTTTTATTTTCTTGAAGTTGGAGAAAACTAATTCTAGCCATATAACTGTTATTTGGCGGTTGCTAGTTGACGACTTTCCTTGTCATATGAATTTTAGGATCACTCATTTTTGCTTATGGTAACATTTGAACACGTTATTAGGTGGTACTCAAGCTTATTATGAGGATTTTCCCTTGGGAAATTATTATAAAAGTGACAAATGGAAATATTGATTGGTTTCTGAACCACTGTGGTGCCCTTGTTTGTTATTTTCCCTTATGTTGCTTAATACTTGGTTTTCTAATTGATAATGTCATCTTAAAGTGTTTCTAATTGATAGCACATATCTCTTAGTGTTAGTACTTTCTAACCTTTCTCTCTCTTACATATATAGGGGATATGTTGAGCATTTTCGCTAGCAAGGATTATGTACTTAACAAGGCCTTAGTGGATTACAGAGTTAAGAAATTTGCATATGCTTGCATCCAGATTGTACACCATAATAGGTAATTAGTTTTTTCCATTTCAACATTCCTTATTAAAAACTTATCCTTTTTAACGTTTTGAATGGAAAAACAGATGTTTGATCTATCATTGTTGATTTTGTTGGCTTTCTATGCTATGATCCTTTAATTGTATATGATATATTTCTTTTGTTGAAAAGTGATATATTTCTTAGATTTTGTTCAGATATATATAATTGACATAAAGGTTTTTTTACCTTCCGCAAACGAATTCAGACTAATCATATTTATATATATGATAAGTTGCCTTTATTTTTCCTCCGAATTATTCTTACTTGATGTTGTTCTTGATAGAAACCAATTGAGGAATCAACTTTTGGCTGCACCTGTGAACTCTAACACACCTGCAACTCTATTGTTGGACACAATTGTTTTCTTATTACAACCTAAACTCCCATGGGTTTGTAAAATTGTTGGCTACTTCCTGGAAAGAAATGCATATCCGTTGATGAGGGATATCACTTTGACAGGGAAGGTATAAATGTACTTCCTTTTTCTTCTACTTGCAAGTGGTTTTTTTATAGTTATTCTGTTTTGCCGTGGATTATCCTCTGCAGGTGTTTTCAGAGAACTAATTCACACTCAAACTATTGCAGGAAAGTGCAGATTCACATCCCAAGAGTTCATTGGCTTCTCTAGAATATCTGCTGTCTCTTTTGAGTTCTCATGTTGGTGAGAAGCCATGTTGTTGCCCACGTGTTGATCCCAATTTGGAGTTTCTCCACTCAAATTCTTACTCTTCCTTTACTGTGTAACCCTTCAAACACGATGTGAACGATTGTGCGGCACTTGTTCTAGCTCGGCGAACAAGTCAGCCGATCAAAATCTGCAAATCGCAGACAACTTTAACACATACTTCAACCTCCCCTCACGTTCTTGGAAAAATAGTTTTAGAAAACATGAAAGATGATTAAATTGATTGAAAACGTTGTTAAAACAAGCATTGAAGACTGTCAATTGCAATAAGAAAGCATAGACTGCAAAGAGTACGACAAGGCTTGGGCAGGGATTCAACAGGTATGCCTCCCCTATAGTACATTTTTAACATATGAAAATGCCGAAACGTCACACCCAAGCATATCGACTTGAAATTGAAAGCAACTACCTAAGCTACGTGCAAGACATAAAGACAAGGTAAATTGGGGCTAATCGGAGCATACGGCCATAGGTAAACACACCTTGGACAAGTATGCTCGTTACACTAGGGACTTGTTCTTCTG

mRNA sequence

ACATTGCATACCAAAGAAAGAAAAGAGAATTGCAAATGCAAAACGTAAAAAAGTGAGACAATCAAGAGCTATAGAAAAAAACAAACAACACATGCAATATACATACAAAGAGCCATCTTGGTTAGGTCAAGTAAAATGTGTTGAGTTCCCTAACTATCAGAGGCAGAAAAGATGATAGAAAAAATCCAGAATTTACACGAAGAAGTCCACAATCACCTAAAAGAAACAACTCAGTCCTACAAAGACGCAACAGACAGAAAAAGAAGACAAACTACCTTTACCAAGGGAGATTTAGTAATGATTCACCTAAGAAAAAATCGATTTCCAACCGAAACATACAACAAACTAAAAGACAGACAATTAGGACCATTCCGTGTCCTAAAGAGGATCGGAGATAATGCTTACAAAATAGAACTACCACCAGACTTACACATTCATTATGTTTTTAATGTCGCAGACCTAAAACAATACTATGCCCTAGATGATTTCTGCCTGGCCAACTAATTCTCAATAAATACCCCTTCTCTTAGCCATTATTGGCAGAGAATTCATTGCGAGAAATAATTCTACTTTGATTTACGTCAAATTATATGTTGTTTTTTATTGACCATTTTTACCTTCAGAAACTTCTTACCTTTGCAGCATATTCATTATTTTGCACCATAATTCCTTTTGTTTTAATATGTTTTATTTTCTTGAAGTTGGAGAAAACTAATTCTAGCCATATAACTGTTATTTGGCGGTTGCTAGTTGACGACTTTCCTTGTCATATGAATTTTAGGATCACTCATTTTTGCTTATGGTAACATTTGAACACGTTATTAGGTGGTACTCAAGCTTATTATGAGGATTTTCCCTTGGGAAATTATTATAAAAGTGACAAATGGAAATATTGATTGGTTTCTGAACCACTGTGGTGCCCTTGTTTGTTATTTTCCCTTATGTTGCTTAATACTTGGTTTTCTAATTGATAATGTCATCTTAAAGTGTTTCTAATTGATAGCACATATCTCTTAGTGTTAGTACTTTCTAACCTTTCTCTCTCTTACATATATAGGGGATATGTTGAGCATTTTCGCTAGCAAGGATTATGTACTTAACAAGGCCTTAGTGGATTACAGAGTTAAGAAATTTGCATATGCTTGCATCCAGATTGTACACCATAATAGAAACCAATTGAGGAATCAACTTTTGGCTGCACCTGTGAACTCTAACACACCTGCAACTCTATTGTTGGACACAATTGTTTTCTTATTACAACCTAAACTCCCATGGGTTTGTAAAATTGTTGGCTACTTCCTGGAAAGAAATGCATATCCGTTGATGAGGGATATCACTTTGACAGGGAAGGAAAGTGCAGATTCACATCCCAAGAGTTCATTGGCTTCTCTAGAATATCTGCTGTCTCTTTTGAGTTCTCATGTTGGTGAGAAGCCATGTTGTTGCCCACGTGTTGATCCCAATTTGGAGTTTCTCCACTCAAATTCTTACTCTTCCTTTACTGTGTAACCCTTCAAACACGATGTGAACGATTGTGCGGCACTTGTTCTAGCTCGGCGAACAAGTCAGCCGATCAAAATCTGCAAATCGCAGACAACTTTAACACATACTTCAACCTCCCCTCACGTTCTTGGAAAAATAGTTTTAGAAAACATGAAAGATGATTAAATTGATTGAAAACGTTGTTAAAACAAGCATTGAAGACTGTCAATTGCAATAAGAAAGCATAGACTGCAAAGAGTACGACAAGGCTTGGGCAGGGATTCAACAGGTATGCCTCCCCTATAGTACATTTTTAACATATGAAAATGCCGAAACGTCACACCCAAGCATATCGACTTGAAATTGAAAGCAACTACCTAAGCTACGTGCAAGACATAAAGACAAGGTAAATTGGGGCTAATCGGAGCATACGGCCATAGGTAAACACACCTTGGACAAGTATGCTCGTTACACTAGGGACTTGTTCTTCTG

Coding sequence (CDS)

ATGTTGAGCATTTTCGCTAGCAAGGATTATGTACTTAACAAGGCCTTAGTGGATTACAGAGTTAAGAAATTTGCATATGCTTGCATCCAGATTGTACACCATAATAGAAACCAATTGAGGAATCAACTTTTGGCTGCACCTGTGAACTCTAACACACCTGCAACTCTATTGTTGGACACAATTGTTTTCTTATTACAACCTAAACTCCCATGGGTTTGTAAAATTGTTGGCTACTTCCTGGAAAGAAATGCATATCCGTTGATGAGGGATATCACTTTGACAGGGAAGGAAAGTGCAGATTCACATCCCAAGAGTTCATTGGCTTCTCTAGAATATCTGCTGTCTCTTTTGAGTTCTCATGTTGGTGAGAAGCCATGTTGTTGCCCACGTGTTGATCCCAATTTGGAGTTTCTCCACTCAAATTCTTACTCTTCCTTTACTGTGTAA

Protein sequence

MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEFLHSNSYSSFTV*

Homology

[Close]

BLAST of CsGy6G015435 vs. ExPASy Swiss-Prot
Match: Q8RWB8 (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana OX=3702 GN=UPL6 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29
Identity = 60/138 (43.48%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ 
Sbjct: 131 IVSLFSGLDYSSEHNLVDFRVKKLAFTCIEAIHQNRNRLRDQLLVTPEEASISTAILMEA 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKS-SLASLEYLLSLLSS 120
           +  LL PKLPWVCKIV Y  +R  + L+R++  T KES      + ++ SLE +L L+  
Sbjct: 191 VSLLLDPKLPWVCKIVSYLQKRKVFKLVREMVTTAKESPRGKTMTGNILSLERVLILIVP 250

Query: 121 HVGEKPCCCPRVDPNLEF 138
           H+G +PCCC  VDP   F
Sbjct: 251 HIGREPCCCTVVDPRWSF 268

[Close]

BLAST of CsGy6G015435 vs. NCBI nr
Match: XP_031743140.1 (E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus] >KAE8647025.1 hypothetical protein Csa_019097 [Cucumis sativus])

HSP 1 Score: 275 bits (703), Expect = 1.16e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT
Sbjct: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH
Sbjct: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 121 VGEKPCCCPRVDPNWSF 137

[Close]

BLAST of CsGy6G015435 vs. NCBI nr
Match: XP_031742863.1 (E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus])

HSP 1 Score: 275 bits (703), Expect = 1.29e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT
Sbjct: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH
Sbjct: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 121 VGEKPCCCPRVDPNWSF 137

[Close]

BLAST of CsGy6G015435 vs. NCBI nr
Match: XP_031743141.1 (E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 5.14e-80
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT
Sbjct: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH
Sbjct: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120

Query: 121 VG 122
           VG
Sbjct: 121 VG 122

[Close]

BLAST of CsGy6G015435 vs. NCBI nr
Match: XP_031743101.1 (E3 ubiquitin-protein ligase UPL6 [Cucumis sativus])

HSP 1 Score: 262 bits (670), Expect = 7.74e-79
Identity = 128/137 (93.43%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           MLSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVNSNTPATLLLDT
Sbjct: 131 MLSIFAGKDYLLNKALVDYRVKKFAYACIQTVHHNRNQLRNQLLAAPVNSNTPATLLLDT 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP+LPWVCKIVGYFLERNAY L+RDITLTGKESADSHPKSSLASLE+LLSLLSSH
Sbjct: 191 IVFLLQPELPWVCKIVGYFLERNAYALIRDITLTGKESADSHPKSSLASLEHLLSLLSSH 250

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 251 VGEKPCCCPRVDPNWSF 267

[Close]

BLAST of CsGy6G015435 vs. NCBI nr
Match: XP_008458320.1 (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6 [Cucumis melo])

HSP 1 Score: 255 bits (651), Expect = 3.81e-76
Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDT
Sbjct: 131 ILSIFAGKDYLLNKALVDYRVKKFAYACIQTVHHNRNQLRNQLLAAPVNPNTPATVLLDT 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESADSHPKSSL SLE+LLSLLSSH
Sbjct: 191 IVFLLQPGLPWVCKIVGYFLERNAYALIRDITLTGKESADSHPKSSLVSLEHLLSLLSSH 250

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 251 VGEKPCCCPRVDPNWSF 267

[Close]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL
Match: A0A1S3C746 (HECT-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497770 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 1.84e-76
Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDT
Sbjct: 131 ILSIFAGKDYLLNKALVDYRVKKFAYACIQTVHHNRNQLRNQLLAAPVNPNTPATVLLDT 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESADSHPKSSL SLE+LLSLLSSH
Sbjct: 191 IVFLLQPGLPWVCKIVGYFLERNAYALIRDITLTGKESADSHPKSSLVSLEHLLSLLSSH 250

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 251 VGEKPCCCPRVDPNWSF 267

[Close]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL
Match: A0A5D3BV28 (HECT-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00550 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.19e-76
Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDT
Sbjct: 131 ILSIFAGKDYLLNKALVDYRVKKFAYACIQTVHHNRNQLRNQLLAAPVNPNTPATVLLDT 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESADSHPKSSL SLE+LLSLLSSH
Sbjct: 191 IVFLLQPGLPWVCKIVGYFLERNAYALIRDITLTGKESADSHPKSSLVSLEHLLSLLSSH 250

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 251 VGEKPCCCPRVDPNWSF 267

[Close]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL
Match: A0A6J1H671 (HECT-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459968 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 6.18e-70
Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA KDY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD 
Sbjct: 63  VLSIFAGKDYLSNKALVDYRVKKFAYACIQTVYHNRNQLRNQLFAAPENSSTPATLLLDA 122

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ DSHP SS++SLE LLSLLSSH
Sbjct: 123 IVFLLQPELPWVCKIVGYFLERNAYVLIRDITLAGKETEDSHPGSSVSSLERLLSLLSSH 182

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 183 VGEKPCCCPRVDPNWSF 199

[Close]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL
Match: A0A6J1H445 (HECT-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459968 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 1.04e-69
Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA KDY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD 
Sbjct: 131 VLSIFAGKDYLSNKALVDYRVKKFAYACIQTVYHNRNQLRNQLFAAPENSSTPATLLLDA 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ DSHP SS++SLE LLSLLSSH
Sbjct: 191 IVFLLQPELPWVCKIVGYFLERNAYVLIRDITLAGKETEDSHPGSSVSSLERLLSLLSSH 250

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 251 VGEKPCCCPRVDPNWSF 267

[Close]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL
Match: A0A6J1KXX0 (HECT-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499207 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 3.14e-69
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           +LSIFA  DY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD 
Sbjct: 63  VLSIFAGNDYLSNKALVDYRVKKFAYACIQTVYHNRNQLRNQLFAAPENSSTPATLLLDA 122

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASLEYLLSLLSSH 120
           IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ DSHP SS+ SLE LLSLLSSH
Sbjct: 123 IVFLLQPELPWVCKIVGYFLERNAYVLIRDITLAGKETEDSHPSSSVPSLERLLSLLSSH 182

Query: 121 VGEKPCCCPRVDPNLEF 137
           VGEKPCCCPRVDPN  F
Sbjct: 183 VGEKPCCCPRVDPNWSF 199

[Close]

BLAST of CsGy6G015435 vs. TAIR 10
Match: AT3G17205.1 (ubiquitin protein ligase 6 )

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 60/138 (43.48%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ 
Sbjct: 131 IVSLFSGLDYSSEHNLVDFRVKKLAFTCIEAIHQNRNRLRDQLLVTPEEASISTAILMEA 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKS-SLASLEYLLSLLSS 120
           +  LL PKLPWVCKIV Y  +R  + L+R++  T KES      + ++ SLE +L L+  
Sbjct: 191 VSLLLDPKLPWVCKIVSYLQKRKVFKLVREMVTTAKESPRGKTMTGNILSLERVLILIVP 250

Query: 121 HVGEKPCCCPRVDPNLEF 138
           H+G +PCCC  VDP   F
Sbjct: 251 HIGREPCCCTVVDPRWSF 268

[Close]

BLAST of CsGy6G015435 vs. TAIR 10
Match: AT3G17205.2 (ubiquitin protein ligase 6 )

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 60/138 (43.48%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ 
Sbjct: 131 IVSLFSGLDYSSEHNLVDFRVKKLAFTCIEAIHQNRNRLRDQLLVTPEEASISTAILMEA 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKS-SLASLEYLLSLLSS 120
           +  LL PKLPWVCKIV Y  +R  + L+R++  T KES      + ++ SLE +L L+  
Sbjct: 191 VSLLLDPKLPWVCKIVSYLQKRKVFKLVREMVTTAKESPRGKTMTGNILSLERVLILIVP 250

Query: 121 HVGEKPCCCPRVDPNLEF 138
           H+G +PCCC  VDP   F
Sbjct: 251 HIGREPCCCTVVDPRWSF 268

[Close]

BLAST of CsGy6G015435 vs. TAIR 10
Match: AT3G17205.3 (ubiquitin protein ligase 6 )

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 60/138 (43.48%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDT 60
           ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ 
Sbjct: 131 IVSLFSGLDYSSEHNLVDFRVKKLAFTCIEAIHQNRNRLRDQLLVTPEEASISTAILMEA 190

Query: 61  IVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKS-SLASLEYLLSLLSS 120
           +  LL PKLPWVCKIV Y  +R  + L+R++  T KES      + ++ SLE +L L+  
Sbjct: 191 VSLLLDPKLPWVCKIVSYLQKRKVFKLVREMVTTAKESPRGKTMTGNILSLERVLILIVP 250

Query: 121 HVGEKPCCCPRVDPNLEF 138
           H+G +PCCC  VDP   F
Sbjct: 251 HIGREPCCCTVVDPRWSF 268

The following BLAST results are available for this feature:

BLAST of CsGy6G015435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWB8	2.0e-29	43.48	E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana OX=3702 GN=UPL6 PE=2 SV...	[more]

BLAST of CsGy6G015435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743140.1	1.16e-92	98.54	E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus] >KAE8647025.1 hypothetic...	[more]
XP_031742863.1	1.29e-92	98.54	E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]	[more]
XP_031743141.1	5.14e-80	100.00	E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]	[more]
XP_031743101.1	7.74e-79	93.43	E3 ubiquitin-protein ligase UPL6 [Cucumis sativus]	[more]
XP_008458320.1	3.81e-76	90.51	PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6 [Cucumis melo]	[more]

BLAST of CsGy6G015435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C746	1.84e-76	90.51	HECT-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497770 PE=4 ...	[more]
A0A5D3BV28	2.19e-76	90.51	HECT-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1H671	6.18e-70	83.94	HECT-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459968...	[more]
A0A6J1H445	1.04e-69	83.94	HECT-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459968...	[more]
A0A6J1KXX0	3.14e-69	83.21	HECT-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499207 P...	[more]

BLAST of CsGy6G015435 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17205.1	1.4e-30	43.48	ubiquitin protein ligase 6	[more]
AT3G17205.2	1.4e-30	43.48	ubiquitin protein ligase 6	[more]
AT3G17205.3	1.4e-30	43.48	ubiquitin protein ligase 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044611	Ubiquitin-protein ligase E3B/C	PANTHER	PTHR45700	UBIQUITIN-PROTEIN LIGASE E3C	coord: 1..137
None	No IPR available	PANTHER	PTHR45700:SF7	BNAC01G43970D PROTEIN	coord: 1..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G015435.1	CsGy6G015435.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity