CsGy6G015150 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G015150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Gy14Chr6: 13751223 .. 13751899 (+)
RNA-Seq Expression	CsGy6G015150
Synteny	CsGy6G015150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATTCAAAACATTTTTTTTTTCCTTCAAACTTCAAAACTTTTCATATTTTCTCCAAATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTGCTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCCCCTGAATCTGAGCTCAAAAGGGGAAGTATCTATTTCTTGATTCCCTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGCAACCACCCTTAAGACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCCGCCGTGCCCACCACCGCTGACACTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGAGAACGACGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAAACAAATTATACTTAACATATAAAAATTTCATTTTTGCCGACGCCGGAATCTGAATTTCCGGCCGGAAGCGGAGGGGTAATTTGGGTTTTTTTCCACTTTTTTTACTGGGGGGTAAGTTTGTTATTAATCATCCAGTTTTTTTTTTTTTTTTT

mRNA sequence

ATAAAATTCAAAACATTTTTTTTTTCCTTCAAACTTCAAAACTTTTCATATTTTCTCCAAATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTGCTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCCCCTGAATCTGAGCTCAAAAGGGGAAGTATCTATTTCTTGATTCCCTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGCAACCACCCTTAAGACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCCGCCGTGCCCACCACCGCTGACACTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGAGAACGACGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAAACAAATTATACTTAACATATAAAAATTTCATTTTTGCCGACGCCGGAATCTGAATTTCCGGCCGGAAGCGGAGGGGTAATTTGGGTTTTTTTCCACTTTTTTTACTGGGGGGTAAGTTTGTTATTAATCATCCAGTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTGCTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCCCCTGAATCTGAGCTCAAAAGGGGAAGTATCTATTTCTTGATTCCCTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGCAACCACCCTTAAGACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCCGCCGTGCCCACCACCGCTGACACTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGAGAACGACGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAA

Protein sequence

MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED*

Homology

[Close]

BLAST of CsGy6G015150 vs. NCBI nr
Match: XP_004149378.1 (uncharacterized protein LOC101207122 [Cucumis sativus] >KGN47230.1 hypothetical protein Csa_017034 [Cucumis sativus])

HSP 1 Score: 308 bits (788), Expect = 1.62e-105
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
Sbjct: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154

[Close]

BLAST of CsGy6G015150 vs. NCBI nr
Match: XP_038902054.1 (uncharacterized protein LOC120088703 [Benincasa hispida])

HSP 1 Score: 293 bits (750), Expect = 1.01e-99
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRGSIYFLIP+TSLPEKKRNA TTLKTPSRKVK+CTVAAV   AD DS
Sbjct: 61  RRILILSPESELKRGSIYFLIPATSLPEKKRNAGTTLKTPSRKVKHCTVAAVSAAADGDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRRERRGSRV+VWRPHLESISED
Sbjct: 121 YLSDVVSDKKPSRRERRGSRVVVWRPHLESISED 154

[Close]

BLAST of CsGy6G015150 vs. NCBI nr
Match: XP_008463824.1 (PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo] >KAA0057142.1 6,7-dimethyl-8-ribityllumazine synthase [Cucumis melo var. makuwa] >TYK24172.1 6,7-dimethyl-8-ribityllumazine synthase [Cucumis melo var. makuwa])

HSP 1 Score: 292 bits (747), Expect = 3.11e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTA-DTD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTPSRKVKNCTVAAVPT A D+D
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED 154
           SYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of CsGy6G015150 vs. NCBI nr
Match: XP_022944509.1 (uncharacterized protein LOC111448946 [Cucurbita moschata])

HSP 1 Score: 270 bits (690), Expect = 1.20e-90
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRG+IYF+IP+TS PEKKRNA ++LKTPS K KNCT      TAD+DS
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSRPEKKRNAGSSLKTPSSKAKNCTA-----TADSDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRR+RRG+RV+VWRPHLESISED
Sbjct: 121 YLSDVVSDKKPSRRDRRGARVVVWRPHLESISED 149

[Close]

BLAST of CsGy6G015150 vs. NCBI nr
Match: KAG6570631.1 (hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269 bits (688), Expect = 2.42e-90
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRG+IYF+IP+TSLPEKKRNA ++LKTPS K KNCT      TAD+DS
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSLPEKKRNAGSSLKTPSSKAKNCTA-----TADSDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRR+RRG+RV+VWRP LESISED
Sbjct: 121 YLSDVVSDKKPSRRDRRGARVVVWRPRLESISED 149

[Close]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL
Match: A0A0A0KBY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G217470 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 7.84e-106
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
Sbjct: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154

[Close]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL
Match: A0A5A7UMR0 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold55219G00010 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.50e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTA-DTD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTPSRKVKNCTVAAVPT A D+D
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED 154
           SYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL
Match: A0A1S3CK32 (uncharacterized protein LOC103501874 OS=Cucumis melo OX=3656 GN=LOC103501874 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.50e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTA-DTD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTPSRKVKNCTVAAVPT A D+D
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED 154
           SYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL
Match: A0A6J1FWT9 (uncharacterized protein LOC111448946 OS=Cucurbita moschata OX=3662 GN=LOC111448946 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 5.81e-91
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRG+IYF+IP+TS PEKKRNA ++LKTPS K KNCT      TAD+DS
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSRPEKKRNAGSSLKTPSSKAKNCTA-----TADSDS 120

Query: 121 YLSDVVSDKKPSRRERRGSRVIVWRPHLESISED 154
           YLSDVVSDKKPSRR+RRG+RV+VWRPHLESISED
Sbjct: 121 YLSDVVSDKKPSRRDRRGARVVVWRPHLESISED 149

[Close]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL
Match: A0A6J1L2H4 (uncharacterized protein LOC111499799 OS=Cucurbita maxima OX=3661 GN=LOC111499799 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 2.41e-86
Identity = 133/155 (85.81%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAG+VLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADTDS 120
           RRILILSPESELKRGSIYFLIP+TSLPEKK+N  TT K  S+K KN T AAVP   D  S
Sbjct: 61  RRILILSPESELKRGSIYFLIPATSLPEKKKNGGTTFKNSSKKTKNST-AAVP--LDATS 120

Query: 121 YLSDVVSDKKPSRRERRG-SRVIVWRPHLESISED 154
           YLSD+VSDKKPSRR+RRG SRV+VWRPHLESISED
Sbjct: 121 YLSDIVSDKKPSRRDRRGGSRVVVWRPHLESISED 152

[Close]

BLAST of CsGy6G015150 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-47
Identity = 104/175 (59.43%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHV+EI  P+TAG++L+ANPNHVLSKP SQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPE----KKRNAATTLKTPSRKVKNCTVAAVPTTA 120
           R+ILILSPESELKRGSIYFLIP TS+PE    KKR      K P     +     V T  
Sbjct: 61  RKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVSTNK 120

Query: 121 DTD--------SYLSDVVSDKKPS---------RRERRGSRVIVWRPHLESISED 155
           D D         YL DV+  +K S         R+  R + V  WRPHL+SI+ED
Sbjct: 121 DLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITED 175

[Close]

BLAST of CsGy6G015150 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-46
Identity = 102/167 (61.08%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNG+VEEI   ITAG++L+ANPNHVLSKP SQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATT------LKTPSRKVKNCTVAAVPT 120
           R+ILILSPESELKRGSIYFLIP +SLPEKKR    T      L+ PS       +     
Sbjct: 61  RKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGDEE 120

Query: 121 TAD-TDSYLSDVVS------DKKPSRRERRGSRVIVWRPHLESISED 155
                + YL +VVS      + +  RR  R + V  WRP L+SISED
Sbjct: 121 CVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSISED 167

[Close]

BLAST of CsGy6G015150 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-32
Identity = 80/188 (42.55%), Postives = 114/188 (60.64%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS---- 60
           M  ++RCC+AC+LPCGALD+IRIVH NGHVEEI+  ITA +++KA+P HVL KPSS    
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  ---QGVV--RRILILSPESELKRGSIYFLIPST---------SLPEKKRNAATTLKTPSR 120
              + V+   +I+I+ PE+EL+RG IYFL+P+T          +  +K NA   +K  S+
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 KVK-------NCTVAAVPTTAD----------TDSYLSDVVSDKKPSRRERRGSRVIVWR 154
             +        C         D          +D YL++++S+K  ++++RR  RV VWR
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRVGVWR 180

The following BLAST results are available for this feature:

BLAST of CsGy6G015150 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G015150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149378.1	1.62e-105	100.00	uncharacterized protein LOC101207122 [Cucumis sativus] >KGN47230.1 hypothetical ...	[more]
XP_038902054.1	1.01e-99	94.81	uncharacterized protein LOC120088703 [Benincasa hispida]	[more]
XP_008463824.1	3.11e-99	96.15	PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo] >KAA0057142.1 6,7...	[more]
XP_022944509.1	1.20e-90	86.36	uncharacterized protein LOC111448946 [Cucurbita moschata]	[more]
KAG6570631.1	2.42e-90	86.36	hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy6G015150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBY5	7.84e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G217470 PE=4 SV=1	[more]
A0A5A7UMR0	1.50e-99	96.15	6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CK32	1.50e-99	96.15	uncharacterized protein LOC103501874 OS=Cucumis melo OX=3656 GN=LOC103501874 PE=...	[more]
A0A6J1FWT9	5.81e-91	86.36	uncharacterized protein LOC111448946 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1L2H4	2.41e-86	85.81	uncharacterized protein LOC111499799 OS=Cucurbita maxima OX=3661 GN=LOC111499799...	[more]

BLAST of CsGy6G015150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30230.1	1.0e-47	59.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	4.2e-46	61.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G29195.1	2.6e-32	42.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..153 e-value: 7.2E-35 score: 121.0
None	No IPR available	PANTHER	PTHR33052:SF26	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 1..154
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G015150.1	CsGy6G015150.1	mRNA