CsGy6G014235 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G014235
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 12577014 .. 12578847 (-)
RNA-Seq ExpressionCsGy6G014235
SyntenyCsGy6G014235
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAACATCGTCATGACGAGTTTAACGCCGTCAAGTAACGTGAATAAAGCCGGCAGTGAAATGTTATTTCGCCGTCAGTTCTATCTTTTAAGAATATTCCCGCGGCCGTTATCACATCAATCCCTTAACCTTTTTCCCTTTCTCTTTTGCAATTCAGATAATATGAATATATTTTTTTCACAATTGAAGCCACTTTCATTGGTACACACGTGCGAAAAAAGAATTACTATTATAATTATGGTAGTGTTGCCTCTCTTTCTAACCATACTCCTTAATGTAGCCCAATGAGTATCAAGTTAATTTTTATGTGAAAAAAATTATGGATTTTATGAGAGAGAGAGAGAAAAAAAAACAATTTTACATCTTGAATCAATTATTATTTTAAAATTTTCAAAAAGTTAAATCTATTGACACAAAATTTGAAGTCAAATAGTTTGACCAAAGAAATTTGATTTATTAACATATTAAACAGAAAGTTATAGAGTCGATGACTAAACAATTTTTAGAGTTACAATTTTATATTTTCTATCTTCGATCACTTTCTACAATATATTAAACAAAAAGACTTTTGTGGAATAAATTCAGTTGGGAGACACTAGAGAAAAGAGTTGTTTCCTTCATTTGAAGGGTTACATTTGGAATTTGACTAAAATTAGAGATGTCCACGTGTTGTGATTTCATAGCGTGTGTAGAACTCGTGGATCCGTCTGGTTTGAAAGAGCGGTCTACCGGTTGGTTCGGTAACGAGTCACTCAGATTTGGGGTTTAAGCGAAGGTTGGCAAATTTTGAAGAGGGTTTTGGTATTTTCACAGCGAGTAGAAATCAAAATTAAACTACAGAAGAAATTGGTAAGAAAACCCATCGATTCCCATCCCACCCCCCCTTCAGTTTTCTTTTATGAGTTTCTTTTTTTCTTCCTAAATTTCGAATTATTGTTGAAAAGATCTGAACTTTGATGGTTGTATGTAATTATTGTCGGAAGATAGATGTTGGTGAGCAAGCAATTTTGGATGGCTGATGATATTCTGATCTGATTCGTGTTTCATATTGTTAGTGATGATCATTACTTTTATGGGTTATGGATTTTTAGAAGATTTTGCTGCCAGTTCTGATCTTGATAACTTGTAATCTTTGGGGGTCTATTTGTGTTTTGGAATTCCGAGGGTTTGTATTTTTCAATTCAGCCACTGCAAAAACATTTCATTTATCCTTTGTAATTTAATTAATACCGAGGACTTAGAACTCTACAATAAGTGGTTTTTGAAATGATACGAGTATCTGATCATGTGATTTACTGTTTTGACTTTTGAGGTTAATATACGTGCACAAAAGTATACTACTTGTTATTACCTTCAGCAAGGATGAATATTGTGTGTTACATTTAATTCCTTGGAGCTGATCATGTTTTGTAGAATGGTGTTACCTATACAATTGTTCTCACACCAATGGTCCCCTCGAGCCTGTTGTATTAATCAATTACATTGATATGTCTGTGTGTTTAGACCTTGTTCGTTGATCTAGTAGAACCAGAGTGATTTTATTAGTAAAGCTTGAAAAGATTTGGATTAGATTTTGATGTTTCTGCACGGTGAGTTGGTCACTGACCTATGGCTCTTCCTAATAGTTCAGACTGGTTTTAATGGATATCAGGTGCTACCAGATCAGCTTGAGTGCATATCTTTCTCTGTTTCATTGCATCCGTGTTTTTTATGGTTCTTTTCTCCACTCTTACTATATTTTCTTTTATGGTTCTTGTTTCTTCTATGGGTATAGACCAAGGGTACTACTAGAAGGAGAGTTGACGACAAACAGTTGCATGCATTTATTTGA

mRNA sequence

ATGTACAACATCGTCATGACGAGTTTAACGCCGTCAAGTAACGTGAATAAAGCCGGCAGTGAAATGTTATTTCGCCTCACTCAGATTTGGGGTTTAAGCGAAGGTTGGCAAATTTTGAAGAGGGTTTTGGTATTTTCACAGCGAGTAGAAATCAAAATTAAACTACAGAAGAAATTGACCAAGGGTACTACTAGAAGGAGAGTTGACGACAAACAGTTGCATGCATTTATTTGA

Coding sequence (CDS)

ATGTACAACATCGTCATGACGAGTTTAACGCCGTCAAGTAACGTGAATAAAGCCGGCAGTGAAATGTTATTTCGCCTCACTCAGATTTGGGGTTTAAGCGAAGGTTGGCAAATTTTGAAGAGGGTTTTGGTATTTTCACAGCGAGTAGAAATCAAAATTAAACTACAGAAGAAATTGACCAAGGGTACTACTAGAAGGAGAGTTGACGACAAACAGTTGCATGCATTTATTTGA

Protein sequence

MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLTKGTTRRRVDDKQLHAFI*
Homology
[Close]
BLAST of CsGy6G014235 vs. NCBI nr
Match: KGN47141.1 (hypothetical protein Csa_020670 [Cucumis sativus])

HSP 1 Score: 150 bits (380), Expect = 9.74e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT 60
          MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT
Sbjct: 1  MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT 60

Query: 61 KGTTRRRVDDKQLHAFI 77
          KGTTRRRVDDKQLHAFI
Sbjct: 61 KGTTRRRVDDKQLHAFI 77

[Close]
BLAST of CsGy6G014235 vs. ExPASy TrEMBL
Match: A0A0A0KHA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190320 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 4.71e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT 60
          MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT
Sbjct: 1  MYNIVMTSLTPSSNVNKAGSEMLFRLTQIWGLSEGWQILKRVLVFSQRVEIKIKLQKKLT 60

Query: 61 KGTTRRRVDDKQLHAFI 77
          KGTTRRRVDDKQLHAFI
Sbjct: 61 KGTTRRRVDDKQLHAFI 77

The following BLAST results are available for this feature:
BLAST of CsGy6G014235 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G014235 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47141.19.74e-46100.00hypothetical protein Csa_020670 [Cucumis sativus][more]
BLAST of CsGy6G014235 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHA04.71e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190320 PE=4 SV=1[more]
BLAST of CsGy6G014235 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G014235.1CsGy6G014235.1mRNA