CsGy6G014060 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G014060
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	transcription initiation factor IIA subunit 1
Location	Gy14Chr6: 12476993 .. 12484821 (+)
RNA-Seq Expression	CsGy6G014060
Synteny	CsGy6G014060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATATTCCACTCTTTATTCTCCCTTTCTTGTCCGCCTCTCTCCTCTTTCCCCATTCTCTCTCTCTCCCCCTTCTTTCCCTCTCTTCTCTCTCTCTTCCTCTTCTCCCTTCTCCCTTCTCCATCGCCCTCCTCTTTCCTTTTACTTCACACAACTCTACCAATCCAAGAACCTTATACGGATTCCATGGATCTTCTCCCTTGAATTTTCTCTCCAGTTTTCTCCCAACACTAAATTCTTTCTGGGTTTAGGCTTGTGGAAGGAATCCGAGGTAGACAGAGCGCGAGGCGGATCCGTTATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGATGTTCTCAAGGAGCTTCAAGGAGTAATTCTTGATCCCCAATCTTGAAATTTTTTTGTTTCTTTTGTTTCGTTTATACTATTATCTTCTCTAGTGAATTCAAATGTTTTCTTTTTTTAATCTGTTTGAAGGATTCGATTGAATTTTTTCGGTGATTACTTTCTGGGTTTGATCCGATTCTTTCTAGGGTTTTGAGGCTTTGAAGCTAATTTAAGCTGTGTGGTTGGGCTGATTGTCTTCTTTGTCGGAACTTTTTAGATGTGGGAGGCGAAGATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGGTGATTACTTCTCTGTCCCATCTACTAATTGTTTTCCGAAGTTCGTAATTAATAATTGAAGGGATTTTGGTAAATTGTAGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGGTAATTGTTGTTTGACTTTGACGTCACTTCTAATCTTTTACATTTGTCTTATTCCCTGCCGTTTACCCACTTCATACTGTCGTGATTGCATCATTTTTTTTTTCACATTTTGTTCCTTTGATAAAGAGGGAGTGTTGGTTTTTAATTTGATTTAAAGTGGATTAGTGGCATTGATATGGTTTTTACCATAAAAATTCTGAAGTATGTTGTAGATAGTTGAACATTCCATTATCTGGGGTTTTGATAGACGTCTACATTCTTCTTTCAGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGGTGAGTCTAGTGTTGAAGTAGTGGAAAGCTTCACAACAATAATTCTGTAGTAATTTATATTGATTGTATTTTGTAGCCTACGTGGAGGGGCGTGAGGAAGCAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGTAATCTCTTTCTTAATTCATGCTTTCATCATGAAAAAATTTGTTCTTGGAGGCTTGATGCAACACCAAAACTGCAACATGAATTTCATCTGCTTCTGATTTTGAATTACTCTACTCCTCTCTGCTATGTATCTATTTGCGCAAAAACTTTGGTAACTTCATTATGATGTTTTAAATTTTGGAAACAATTCTCAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAACAGTGTTTTTGAGATTGAGGTTTGGTTTTCTTACCTGTCCTTTGAGCCTTGGACTCTCTTGTCAATTTTCTTGCACATAATTTCACGTCATAGCATATAATTTTTATTATTTTGTCTCTCATTCCAAGTAAAGCAAGGGTTAAAGAGTAATTACAAAAAAGGCTTCTCCGCTGAAGCCAACTGAGAGATATTGTACCTAACAAGGGCCCAAATGTCACTATGAGACCTCTCAAGGCCTTAAAATTTTTTGTTGTTTCTCTCTCCTTGAAGGACCTACACAATAATGCACACCCTGGTTTGTTACAAAACCTTATATTCTCATGAAAGATGAGAGGGAACTCCTTGATCATCTCTCTGCAACCCTATGTCTAACCAAGCATAATCTGGAACTCTTCAAAGAAACAACTCCAAATTACATGACCTAGATCACAATTTTGATATGATCAAAATTCTCTGCCACAAGACAATGACTTTATTCGGTATTTTCATCTTCTACTACAAGACAATGACTTAATTCATGGCCACTTGAGGGTGAGGATTGACCAAACAAAGGAAATTTTTTTGTAAGACATACCTTTGGATGGAGTAGAGGACTCCAAATATGAACATCCCTTCTCCCCAAGATTCAACTGAACTTCACAATCAGAGAAAGAAAGGCAATGATTCCGTTGTTGTCCTCTAGTTTTCTTCTCAGATAGAGGACGGTGGAACCCCTTGAGAGGTCAAATTTCAGTTCCATAGTCTTGTTTGACTGCAAGTTGTGGAATTAGTTATAGAATCAATAGTAAAAGTGTCATGTACACAATTGTTTTTCCTGGATGGTAGTAAAAGCGTCATGTTCCCAAGGGGTGGATGCTCATAATTGTTTTACCTGGATGATTCTCATGTACATGATATAGAAAGATGTAACAACACACGACCTTACACATGGAGCCATGCTACCTCATAACAAGCTAAGGAGTGTTCTAGTTTCCCTCAATTTAAACACATAATATTTTATGGGTTAAGTGTACATAATATGAAATTAATATTTGACATGGAAACTTCAGATATTCTTTTATTGCTATAAGAAACCGGACGATATCTCAAAATGAATCCCACAATGGAGGGGAAATTGGAGAGCGGCATTTCACATTCAAGCTCAATTATACATGCATCTCTCACTTTGTAGATTGAAAAATACCAGACTGTTTGAGAAGCTTAGTCTTTAGTTTACAGCTCATTTTGTCCAGTGCCCTCAACAATTGCCAATAAATGTGTTTATACTCATTCTCAGTGTGGGGTTCCTCTGCACAAACTTCATGCCATCGACTCATTTTCACATATCTAGCCAACAGATTGACTACCCCTTTGATTACCAGCTTGCTTCTGATGCCTCACGTGTGTAATGGGAATTGGAAAGATTGGTATATGTCTATAAGAGAGAGAGATAGAAATTTTAGATCTGTAATATTCTTGACCGTAAATTCAGGTGGCTAGACTTGGCTCTGTGAGGCTACAAGATAATCTGGAATGGTAAGTTCAAAGGATGTGCATTATGGGTTGAGCTAGAAATGGTTATATGATTGATAGTAATTTACTAGTAGAACAATTAGTGTTGCCATTTGATTGGCTAGAGGTCAAGCAACTCCTCCTAGGTGTTTGTTTTAGAGAAACCTTTTTTTAAAGGCTACACTGTTGATAGTTGGTGGTATTTGGATCTTCAGTCATATTCACAATGAGGTTGTCTGGGCATTTGGATCTTCAGTCATATTCAAAACGAGGTTGTCTATCTTTCTTGCATGAGACCTCCATTCCCTACCCCTTCAACCAGAAGTTATGAGTAGCATGGACACAGATTAGTTTCTAAAAATCTAGGATGGGACGGCAAGGAACAGGTTTATATATATATATATATATATTTATTTATTTATTTGTGAACTCATACTAAAAATTTGTTTTAATTTATTATGGTTATGCTTAATACATCAACCAACTAATCGATCTTTCTAGAAACCAACTTTTAATAAGATGATGTCCTGAGGAGGAGATTTGGAATACCATTAGGCTCAATAGCCCTTTATAGGTTTGTCTCTAAGGAGTTTGTTTGTTTTGTCGTTACCATTTTATTGTTGTTCTTTTGGATTCATGATAGTTAGTGGAACTTTTTTTTAAAATAAATAAATAAATTATTAATTATCGTTATTATTTTTAAGAGCATTTCATATGATTTAATGAAATTAAAGTTTGGCTTCTTTTTAAAAAACTTCCATTAAGAAGATGAAAAATCAAAATACAATGGGTTCAATTGAAGCAAGGGGAAACTGGCAACACAAGGTGCTCCAAAATTCATGTAACCAAAAAGTCACGTCCTAAATACCCTCTCAAGAACTCTCTCTTTTGAGGAACACTTTCTTTTCCTTTCCAGCTTGGTGAAGCACAAAATAACCAAAATTCGCTGCCAAGGAATCCCTCACCTGGAATGGGGATACACAACAGCCTGTTCTAATGCCTCACAAATGTTTGAATTCTGTGCAAAGACCGAACTTTTATCAAAATTTTAAATGATTGATCATCTTAAAAGAAAAAGTAAATTTGAAGTCAAATAATGCTTAGGCCTTGATTAATACTTTTCTTATTTGTCACGATGCATTTATTTTTCTGTTTTCATTCATGCTAATTGTATTTATTTCCTATATTTGCTGCTGACACTTCTTAGGTTGCAAATATTCGCTTGAGCTTTCTATTGGTGGTTTATGACTAAATAGAATTCATGGGATTACATTTTACCGAATGCTTTCAGTTTATTGTGATCAGTCTTTGACACTCCTTAGTGGTGTGCTTTTGCAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCAGGCGCTATCACTTCTGCAAAGAGTGCAACGTCATCACATATTGAAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCTACACCTAACGTTAGCTCTCTCTCTTTTCTTCCCTTAAAGTTATAGAATCTGCTATTGTTAATACAAGGAATATTTATGTAATAGTAATAGAAATTTTATACTTTTCACCCATCTTTTTACTTGTTTTGGTTTTGCAAGGTGGGTGCCTATTCTTCAGAAGGTTACTTGTCTGCCACTGTTTTTTGATTATCCTTTCATCTTTTTGTAGAAGTCAGGCATCCGTTCCATGTCTTCTTATAAGGATGTCCGTAGTCATAGAATGTTGTTTGATAGACAAAGCCTCGTGGAGCTAGGTACAAGGCACAAACTTATCATGGACGTCATGAAAGCAGGGATTGTTTGCTCGGAAAAATTAGAACCTTCCTCAATGAAAAAAAATTATCACTATCGAGTTACACAGTATCGTAGAAACAATTAGGCACACACAAAATAATGTTTAAAATGTCAGCTGTACGATACAAATGTGTTTAACCAAGAATTTTTGTATGTGATTTCCTGGCTTCCTTCTAATGGTTAATACTAGAGCTCATGAGGTGTTTGGCTTTTGTTTTTGATGGAAGACAGAAGATCATTTGAATAAGTCGCAAGATTCTGTGTTGGCTAAAATAACAAGCATATGTCAGTGTCCTCCCTCTTTGTAATATCTCAATTTCTTTCAGGACTCACAATCCCTCAACCAAGCAACCCATGAATATCATGCTCCAATCCGATACGAACACCACATGCTCACTAACACAACAGTCCTCTCTGTAATATAAAAAATGATACCGACACCATCATAGCTACATGAAAGATGCTTATTTAAGTATTTGCCAATAGACAGCAACAAATCACTATGTTGCTTTTTCTTAAAGGTGCTAACAAATGTCCTCTCTAGTTGGTTATCAAGTAAAGGATGCAAAATTTTAGCACCTGTAGATTAAACCGTAATCAGTCTGTACTTTTTGGTATTTTGGAACTGCCTACTGCCTACTCTCTTCCATGATTGATGACGGGTTTTCCTGGATCTGCACATTTTATATGGTTTTTTCAACTCTTTGCTCCTGTCTGTGGTCAAATAACTTATTTTCTAGTCACAACTAATTAATATTGGACTGAACATGTTAGGCATTAAAATAATTGCTTGATTCTTCTGGTTTTTATTGTGTCCATCCTATGCGTTATCTGGGTTGCATTTTTGTTCATCCTACTTCTTGATGATTAGAATTCTTCGTATCATAATTAATGGAAATGGTTTTCTCATTGCTCTCTGTTCACTGAGTTGTGTTTCTGTTATTCACATTTCTGACATCCCCTGCAGATATACAATTACCAGGGTGTCTTCAATGAAGATTACAACATAGCAAATACACCAGCACCTAATGGTAAATGTTATGAAGTGTCTTCATGATTGTGACTATTCTATGACAAGTATTGAAATTTGGTTTTCTGTTAGAGAACGATCCGGAAAGAAGGTTTTAAATTAAAAATTGGTTTTTAACTTTCATATCGAAGTTTGTTTGTCTTCCACGTTAAATATTTTACATTGCATTTAATAGGAATTTTAAGTGGCCCTTTTAAACATAAAACACAAACAATTATTACATAAATGCTGTGTGCGGTTTAAAGCACAAACTTGCTGCTGGGTATAATGTAAAATCTTACCAACAAAAGCAATTGTTTTTATGTAATTCAATAATCAGAATAGAACGTTTGGGAGGACAAAAAACAGCAAGGAACAAGGGTGAAAACTAAGGTTCCCAAGAGAATTTAAAGCAGTAACAAAATTTGTCTCTAATTGTTTATCTTTTCTTTACAGATCCACCAGCTGGAACTCCTGCGGTTGTCACCCAGGATGATGTTAATGAAGAGGAGGAGGATAGCGAGCCTTCATTGAACGAAGACGACGACGATGACGATTTGGATGATGTGGATCAAGGAGAAGAATTGAGCACACAACATCTAGTTTTAGCTCAGTTTGACAAGGTACTTTGCCTCCTGTTTTTTTAGGTCCAGTTGTGCAGCATATCCTAGAGCATTTTTAGAATCTACCATGCCATTAAATATATATCATCATTACTTTTCATGTAATAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTGAATTTTTCCCTCCAAAACTAACAGGTTAGAAATATTAAACCGAGTCCGGTTTTCATGGAAGCTTGGTTTATTTGGTTTGTCAGGCAACTGGGGAATTCGACTTCTGATTTTTAATGGAGGCATCTTCATTGGGAGGTTGGTTATATTGGTAGCAGCAGCAGTGATGGGAAAGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGAGGAAAAGGACATGTTGATGATTCTTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTCCGCCTTCAATGAATGGCAACTTGAGGATTTTCGAGTAAAAATTTATTATTGCTCTAATGGAATATATTTGTAACTTCAATTTCTTATGCTCTTTGATTCTTCCCCCTCTAATCAATCATTGTTTTGTTTATTCAAATTTTCTTTGCTTTAATTCTTCACACTAATCCCCAATTAGGGCTCCTTGTAATGTGTAATGAAACTGAACAAATATCTTAGTGGTTCAAATCTCGATGCATGGGCTCTTCTATCCCAAAGTGATTACGTCTTGACAATCCATTCTCTTTATAATGACTTTTTAAGTGATAAAAAACGAACATTTGTCAAGCACTTAAAAGTGTTCATTCTAAATGTATCTTTCATCTTTTGCTTTTCTGTAGTCAAATCTACTACATACTTGGAACGACATTTTTATGGCTTTCTATTGGTTATCAACTCTATCTCTTATAAGTGGTAAAATAGAAATAAAAATATAGTGTTATTGCAATTGTTGTAAATTCCTTCAGAAGAGTCTAATTTGATTTGATTAGAGTATT

mRNA sequence

ATTTATATTCCACTCTTTATTCTCCCTTTCTTGTCCGCCTCTCTCCTCTTTCCCCATTCTCTCTCTCTCCCCCTTCTTTCCCTCTCTTCTCTCTCTCTTCCTCTTCTCCCTTCTCCCTTCTCCATCGCCCTCCTCTTTCCTTTTACTTCACACAACTCTACCAATCCAAGAACCTTATACGGATTCCATGGATCTTCTCCCTTGAATTTTCTCTCCAGTTTTCTCCCAACACTAAATTCTTTCTGGGTTTAGGCTTGTGGAAGGAATCCGAGGTAGACAGAGCGCGAGGCGGATCCGTTATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGATGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAGATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTACGTGGAGGGGCGTGAGGAAGCAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAACAGTGTTTTTGAGATTGAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCAGGCGCTATCACTTCTGCAAAGAGTGCAACGTCATCACATATTGAAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCTACACCTAACATATACAATTACCAGGGTGTCTTCAATGAAGATTACAACATAGCAAATACACCAGCACCTAATGATCCACCAGCTGGAACTCCTGCGGTTGTCACCCAGGATGATGTTAATGAAGAGGAGGAGGATAGCGAGCCTTCATTGAACGAAGACGACGACGATGACGATTTGGATGATGTGGATCAAGGAGAAGAATTGAGCACACAACATCTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGCAACTGGGGAATTCGACTTCTGATTTTTAATGGAGGCATCTTCATTGGGAGGTTGGTTATATTGGTAGCAGCAGCAGTGATGGGAAAGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGAGGAAAAGGACATGTTGATGATTCTTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTCCGCCTTCAATGAATGGCAACTTGAGGATTTTCGAGTAAAAATTTATTATTGCTCTAATGGAATATATTTGTAACTTCAATTTCTTATGCTCTTTGATTCTTCCCCCTCTAATCAATCATTGTTTTGTTTATTCAAATTTTCTTTGCTTTAATTCTTCACACTAATCCCCAATTAGGGCTCCTTGTAATGTGTAATGAAACTGAACAAATATCTTAGTGGTTCAAATCTCGATGCATGGGCTCTTCTATCCCAAAGTGATTACGTCTTGACAATCCATTCTCTTTATAATGACTTTTTAAGTGATAAAAAACGAACATTTGTCAAGCACTTAAAAGTGTTCATTCTAAATGTATCTTTCATCTTTTGCTTTTCTGTAGTCAAATCTACTACATACTTGGAACGACATTTTTATGGCTTTCTATTGGTTATCAACTCTATCTCTTATAAGTGGTAAAATAGAAATAAAAATATAGTGTTATTGCAATTGTTGTAAATTCCTTCAGAAGAGTCTAATTTGATTTGATTAGAGTATT

Coding sequence (CDS)

ATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGATGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAGATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTACGTGGAGGGGCGTGAGGAAGCAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAACAGTGTTTTTGAGATTGAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCAGGCGCTATCACTTCTGCAAAGAGTGCAACGTCATCACATATTGAAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCTACACCTAACATATACAATTACCAGGGTGTCTTCAATGAAGATTACAACATAGCAAATACACCAGCACCTAATGATCCACCAGCTGGAACTCCTGCGGTTGTCACCCAGGATGATGTTAATGAAGAGGAGGAGGATAGCGAGCCTTCATTGAACGAAGACGACGACGATGACGATTTGGATGATGTGGATCAAGGAGAAGAATTGAGCACACAACATCTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGCAACTGGGGAATTCGACTTCTGA

Protein sequence

MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF*

Homology

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BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot
Match: Q9USU9 (Transcription initiation factor IIA large subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=toa1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.1e-13
Identity = 106/423 (25.06%), Postives = 171/423 (40.43%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGG 67
           +Y +VI DVI   R +F +NG  +  L+ELQ +W++K++     T P  ++      P G
Sbjct: 9   VYHHVILDVIANSRSDFEENGVDDATLRELQNLWQSKLVATDVATFPWAQA------PVG 68

Query: 68  PITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHSA 127
              P+  L  P  G     T + D+   P    +PI   +   A  A+  + T    H  
Sbjct: 69  TF-PIGQLFDPVSG---LRTDSLDVT-APAVANSPILNNI--AAIRAVQQMDTFAQQHGN 128

Query: 128 SGTDASPAATTPGGSGN--------NNVEVRSGRPTPY-------MQPPSWMGQRTPV-- 187
           S   + P  + P  + N         NV+       P+       +Q P+     +P+  
Sbjct: 129 SNYYSPPTPSLPQSATNISFDSSAIPNVQSNPNNTAPFPSYSSNSLQLPTNQTADSPIIN 188

Query: 188 DVNIAYV--EGREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQAN-------GF 247
           D + A V   G+E A D  +  +   L     + N    K+ +      +N         
Sbjct: 189 DHSTANVTSTGQEHAPDSSSTNSFGGL----LLPNQNSPKKSELGETESSNTTPANSRND 248

Query: 248 IPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDP 307
           +PQ DGA      + +++ +G  S+        + K+    +      +I Q+DG + D 
Sbjct: 249 VPQTDGA------IHDLDDAGSPSNFESNRFAIAQKADAEIYEVLKKNRILQIDGTIED- 308

Query: 308 YDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDD 367
                            NED           PP  TP              S+ ++N D 
Sbjct: 309 -----------------NED--------EKKPPVDTP--------------SDEAINSDL 368

Query: 368 DDDDLDDVDQGEELST--QHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 403
           DD D D+  + EE S   Q +VL  +DKV   K++WKC  +DG++ +N KD LF KA GE
Sbjct: 369 DDPDSDEAPETEEGSDIGQAIVLCLYDKVNHHKNKWKCVFRDGVVGVNGKDYLFFKANGE 368

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BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot
Match: Q54G80 (Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2a1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.2e-10
Identity = 59/181 (32.60%), Postives = 88/181 (48.62%), Query Frame = 0


Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKI----PQLDGPMPDPYDDVLSTPNIY---N 300
           +G N+++    +  S+ S+ ++++  SL  I    PQ DG + +  +D  +  N     N
Sbjct: 133 NGSNNNNNNNNSNNSSNSSNNNNLPSSLRSIMNPMPQNDGTLDESDNDDDNNNNNNDNDN 192

Query: 301 YQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEE---------------EEDSEPSLN 360
                N D  I +    N    G   +   D +N++               EEDS  S  
Sbjct: 193 ENNKDNIDKLIIDGFKKNFNFNGDEVIPQNDGLNDDDDLDDEEIGGGGGKVEEDSLGSDL 252

Query: 361 EDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 400
           +DDDDDD D +        +H VL Q++KV+R K++ KC  KDGIMH+N KD LFNKA G
Sbjct: 253 DDDDDDDPDPI-------IEHFVLCQYEKVSRIKNKRKCNFKDGIMHLNGKDTLFNKANG 306

[Close]

BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot
Match: P52654 (Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIA-L PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 9.4e-10
Identity = 90/413 (21.79%), Postives = 166/413 (40.19%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSK 62
           TS   +Y  VIEDVI  +RD F+D G  E VL+E++ +W  K++ + AV    +    S 
Sbjct: 6   TSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVELSPDSGDGSH 65

Query: 63  PTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGP 122
           P P           +     + ++   A             +     TA  +  ++    
Sbjct: 66  PPP-----------IVANNPKSHKAANA-----------KAKKAAAATAVTSHQHIGGNS 125

Query: 123 SDHSASGTDASPAATTPGGSGNNNV----EVRSGRPTPYMQPPSWMGQRTPVDVNIAYVE 182
           S  S  G  +S       G  N  V    EV S  P P + P S            + ++
Sbjct: 126 SMSSLVGLKSSAGMAAGSGIRNGLVPIKQEVNSQNPPP-LHPTS----------AASMMQ 185

Query: 183 GREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEI 242
            +++AA  G        T D   +                N  +P   G+  + + V  I
Sbjct: 186 KQQQAASSGQGSIPIVATLDPNRI-------------MPVNITLPSPAGSASSESRVLTI 245

Query: 243 EISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQ--LDGPMPDPYDDVLSTPNIYNYQG 302
           ++      + +   I +A      H+  S++ +P       +    +  LS+ N      
Sbjct: 246 QVPASALQENQLTQILTA------HLISSIMSLPTTLASSVLQQHVNAALSSANHQKTLA 305

Query: 303 VFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNED-------DDDDDLDDV 362
              +     ++   ++       +   DD + +++D E + +ED       + +DD+ D 
Sbjct: 306 AAKQLDGALDSSDEDESEESDDNIDNDDDDDLDKDDDEDAEHEDAAEEEPLNSEDDVTDE 365

Query: 363 DQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
           D  E   T ++++ Q+DK+TR++++WK  LKDGIM++  KD +F K+ G+ ++
Sbjct: 366 DSAEMFDTDNVIVCQYDKITRSRNKWKFYLKDGIMNMRGKDYVFQKSNGDAEW 366

[Close]

BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot
Match: O08949 (Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.7e-09
Identity = 100/416 (24.04%), Postives = 160/416 (38.46%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNAS 132

Query: 128 TGPSDHSASGTDASPAATTP-----GGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNI 187
           +  S  + + T A PA  TP       SG     VR+     Y+  P             
Sbjct: 133 SITSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQQ----------- 192

Query: 188 AYVEGREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANS 247
           + V  ++        G    + Q       G              G  PQ          
Sbjct: 193 SVVLQQQVIPQMQPGGVQAPVIQQVLAPLPG--------------GISPQTGVIIQPQQI 252

Query: 248 VFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNY 307
           +F       N +   P  + +   A +        +IP      P         P +   
Sbjct: 253 LFT-----GNKTQVIPTTVAAPTPAQA--------QIPAAGQQQPQAQPAQQQAPLVLQV 312

Query: 308 QGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNED--------DDDDDL 367
            G         +T +  D          +D  ++EEED E    ED        + +DD+
Sbjct: 313 DGT-------GDTSSEEDEDE------EEDYDDDEEEDKEKDGAEDGQVEEEPLNSEDDV 372

Query: 368 DDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
            D +  E   T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+KA G+ ++
Sbjct: 373 SDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 377

[Close]

BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot
Match: P52655 (Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.1e-09
Identity = 110/426 (25.82%), Postives = 170/426 (39.91%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNA- 132

Query: 128 TGPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
              S+ SA+ T A+ A   P G             TP  Q  +  GQ   V         
Sbjct: 133 ---SNMSAAATAATLA--LPAG------------VTPVQQILTNSGQLLQV--------- 192

Query: 188 REEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE 247
                 R A GA     Q  F      + +     Q Q    IPQ    G  A  + ++ 
Sbjct: 193 -----VRAANGA-----QYIF------QPQQSVVLQQQV---IPQMQPGGVQAPVIQQVL 252

Query: 248 ISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQ---LDGPMPDPYDDVLSTPNIYNYQG 307
                     PG I+          +  ++  PQ     G         ++ P     Q 
Sbjct: 253 AP-------LPGGISP---------QTGVIIQPQQILFTGNKTQVIPTTVAAPTPAQAQI 312

Query: 308 VFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDD------------ 367
                      PA    P       T D  +EE+ED E   ++D+++D            
Sbjct: 313 TATGQQQPQAQPAQTQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVE 372

Query: 368 -----DLDDV--DQGEEL-STQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 403
                  DDV  ++G+EL  T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+KA
Sbjct: 373 EEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKA 376

[Close]

BLAST of CsGy6G014060 vs. NCBI nr
Match: XP_004143132.2 (LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis sativus])

HSP 1 Score: 797 bits (2058), Expect = 8.20e-291
Identity = 400/402 (99.50%), Postives = 400/402 (99.50%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPI  PLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIXNPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402

[Close]

BLAST of CsGy6G014060 vs. NCBI nr
Match: XP_031745118.1 (LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis sativus])

HSP 1 Score: 797 bits (2058), Expect = 8.20e-291
Identity = 400/402 (99.50%), Postives = 400/402 (99.50%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQ PLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQXPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEAADRGAAGAHPSLTQDFFMMN GKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNXGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402

[Close]

BLAST of CsGy6G014060 vs. NCBI nr
Match: XP_008464085.1 (PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo])

HSP 1 Score: 789 bits (2037), Expect = 1.25e-287
Identity = 398/402 (99.00%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEA DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEA-DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of CsGy6G014060 vs. NCBI nr
Match: XP_038901376.1 (transcription initiation factor IIA subunit 1-like [Benincasa hispida])

HSP 1 Score: 771 bits (1990), Expect = 1.83e-280
Identity = 387/402 (96.27%), Postives = 391/402 (97.26%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLR+EFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLREEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS NNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSTNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           +E  DRGA GAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA NSVFEIEI
Sbjct: 181 DEP-DRGATGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAVNSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCN+SDGRPG ITSAKS TSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNASDGRPGFITSAKSPTSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of CsGy6G014060 vs. NCBI nr
Match: KAA0061868.1 (transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK15388.1 transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 771 bits (1992), Expect = 2.37e-279
Identity = 390/396 (98.48%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEA DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEA-DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 396
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKV 395

[Close]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL
Match: A0A0A0KE66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1)

HSP 1 Score: 801 bits (2069), Expect = 1.28e-290
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 135 MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 194

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 195 SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 254

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 255 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 314

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 315 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 374

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 375 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 434

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 435 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 494

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 495 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 536

[Close]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL
Match: A0A1S3CM61 (transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502057 PE=3 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 6.07e-288
Identity = 398/402 (99.00%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEA DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEA-DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL
Match: A0A5D3CVW1 (Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00280 PE=3 SV=1)

HSP 1 Score: 771 bits (1992), Expect = 1.15e-279
Identity = 390/396 (98.48%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EEA DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEA-DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 396
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKV 395

[Close]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL
Match: A0A6J1FXQ4 (transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448672 PE=3 SV=1)

HSP 1 Score: 734 bits (1895), Expect = 2.37e-266
Identity = 371/402 (92.29%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQAGAV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGS +N V+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSASN-VDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           +EA DRG    HP+LTQDFFMMNSGKRKRD FASQYQ NGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 DEA-DRGVP--HPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCN+SDGRPG ITSAKSAT +HIERSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNASDGRPGVITSAKSATLTHIERSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEE+STQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 398

[Close]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL
Match: A0A6J1JHB9 (transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484486 PE=3 SV=1)

HSP 1 Score: 733 bits (1891), Expect = 9.66e-266
Identity = 370/402 (92.04%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQAGAV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGS +N V+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSASN-VDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           +EA DRG    HP+LTQDFFMMNSGKRKRD FASQYQ NGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 DEA-DRGVP--HPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCN+SDGRPG ITSAKSAT +HI+RSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNASDGRPGVITSAKSATLTHIKRSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEE+STQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 398

[Close]

BLAST of CsGy6G014060 vs. TAIR 10
Match: AT1G07470.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 438.3 bits (1126), Expect = 6.5e-123
Identity = 245/408 (60.05%), Postives = 298/408 (73.04%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA-ANSVFEI 242
           R+E  +RG   ++   TQD F+ +SGKRKRDD ++ YQ  G IPQQDGA DA   + FE 
Sbjct: 185 RDE-PERG--NSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDAIPEANFEC 244

Query: 243 EISGCNSSDGRPGAITSAKSATSSHIERSLL----KIPQLDGPMPDPYDDVLSTPNIYNY 302
                        A           I R L+    KIPQ+DGPMPDPYD++LSTPNIY+Y
Sbjct: 245 -------------AALRITYVGDRKIPRDLIGSSSKIPQVDGPMPDPYDEMLSTPNIYSY 304

Query: 303 QGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEE 362
           QG  NE++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+
Sbjct: 305 QGP-NEEFNEARTPAPNEIQTSTPVAVPNDII----EDDEELLNEDDDDDELDDLESGED 364

Query: 363 LSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
           ++TQHLVLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKATGEFDF
Sbjct: 365 MNTQHLVLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKATGEFDF 375

[Close]

BLAST of CsGy6G014060 vs. TAIR 10
Match: AT1G07480.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 438.0 bits (1125), Expect = 8.5e-123
Identity = 245/406 (60.34%), Postives = 299/406 (73.65%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA-ANSVFEI 242
           R+E  +RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA   + FE 
Sbjct: 185 RDE-PERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFEC 244

Query: 243 EISGCNSSDGR--PGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQG 302
           +     S   R  P    S+ S           KIPQ+DGPMPDPYD++LSTPNIY+YQG
Sbjct: 245 DAFRITSIGDRKVPRDFFSSSS-----------KIPQVDGPMPDPYDEMLSTPNIYSYQG 304

Query: 303 VFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELS 362
             +E++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++
Sbjct: 305 P-SEEFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMN 364

Query: 363 TQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
           TQHLVLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKA GEFDF
Sbjct: 365 TQHLVLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAGEFDF 375

[Close]

BLAST of CsGy6G014060 vs. TAIR 10
Match: AT1G07480.2 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 438.0 bits (1125), Expect = 8.5e-123
Identity = 245/406 (60.34%), Postives = 299/406 (73.65%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA-ANSVFEI 242
           R+E  +RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA   + FE 
Sbjct: 185 RDE-PERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFEC 244

Query: 243 EISGCNSSDGR--PGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQG 302
           +     S   R  P    S+ S           KIPQ+DGPMPDPYD++LSTPNIY+YQG
Sbjct: 245 DAFRITSIGDRKVPRDFFSSSS-----------KIPQVDGPMPDPYDEMLSTPNIYSYQG 304

Query: 303 VFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELS 362
             +E++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++
Sbjct: 305 P-SEEFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMN 364

Query: 363 TQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
           TQHLVLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKA GEFDF
Sbjct: 365 TQHLVLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAGEFDF 375

[Close]

BLAST of CsGy6G014060 vs. TAIR 10
Match: AT5G59230.1 (transcription factor-related )

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-13
Identity = 37/80 (46.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 323 QDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDG 382
           +D+   + +++E  LNEDDDD++ DD+D  ++++ QHLV+ QFDKV R+K++W+C    G
Sbjct: 109 RDEAIVDVDENEEPLNEDDDDEE-DDIDD-DDMNIQHLVMCQFDKVKRSKNKWECKFNAG 168

Query: 383 IMHINNKDILFNKATGEFDF 403
           +M IN K++LF++ATG+F+F
Sbjct: 169 VMQINGKNVLFSQATGDFNF 186

HSP 2 Score: 61.6 bits (148), Expect = 1.6e-09
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 3  TSTSSIYINVIEDVINKLRDEFVDNGP-GEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
          + TSS Y  VI+DVINK R + V NG   E VL ++Q MW+ KM+QAGA++G IE S+ S
Sbjct: 6  SDTSSSYNYVIDDVINKSRCDLVYNGELDESVLSQIQSMWKTKMIQAGAMSGTIETSSAS 65

Query: 63 KPT 65
           PT
Sbjct: 66 IPT 68

The following BLAST results are available for this feature:

BLAST of CsGy6G014060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9USU9	3.1e-13	25.06	Transcription initiation factor IIA large subunit OS=Schizosaccharomyces pombe (...	[more]
Q54G80	7.2e-10	32.60	Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=446...	[more]
P52654	9.4e-10	21.79	Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227...	[more]
O08949	4.7e-09	24.04	Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=G...	[more]
P52655	6.1e-09	25.82	Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 ...	[more]

BLAST of CsGy6G014060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143132.2	8.20e-291	99.50	LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis ...	[more]
XP_031745118.1	8.20e-291	99.50	LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis...	[more]
XP_008464085.1	1.25e-287	99.00	PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo]	[more]
XP_038901376.1	1.83e-280	96.27	transcription initiation factor IIA subunit 1-like [Benincasa hispida]	[more]
KAA0061868.1	2.37e-279	98.48	transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK153...	[more]

BLAST of CsGy6G014060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE66	1.28e-290	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1	[more]
A0A1S3CM61	6.07e-288	99.00	transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A5D3CVW1	1.15e-279	98.48	Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1FXQ4	2.37e-266	92.29	transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1JHB9	9.66e-266	92.04	transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita m...	[more]

BLAST of CsGy6G014060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07470.1	6.5e-123	60.05	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07480.1	8.5e-123	60.34	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07480.2	8.5e-123	60.34	Transcription factor IIA, alpha/beta subunit	[more]
AT5G59230.1	1.9e-13	46.25	transcription factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004855	Transcription factor IIA, alpha/beta subunit	SMART	SM01371	TFIIA_2	coord: 7..402 e-value: 1.2E-99 score: 347.1
IPR004855	Transcription factor IIA, alpha/beta subunit	PFAM	PF03153	TFIIA	coord: 8..211 e-value: 5.7E-16 score: 59.5 coord: 262..401 e-value: 4.5E-32 score: 112.5
IPR004855	Transcription factor IIA, alpha/beta subunit	PANTHER	PTHR12694	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1	coord: 2..402
IPR009088	Transcription factor IIA, beta-barrel	GENE3D	2.30.18.10		coord: 336..402 e-value: 8.0E-26 score: 91.3
IPR009088	Transcription factor IIA, beta-barrel	SUPERFAMILY	50784	Transcription factor IIA (TFIIA), beta-barrel domain	coord: 345..402
None	No IPR available	GENE3D	1.10.287.100		coord: 1..53 e-value: 1.6E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	PANTHER	PTHR12694:SF16	BNAC08G45360D PROTEIN	coord: 2..402
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 357..402 e-value: 2.21582E-27 score: 102.603
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 5..62 e-value: 6.13474E-17 score: 73.7127
None	No IPR available	SUPERFAMILY	47396	Transcription factor IIA (TFIIA), alpha-helical domain	coord: 4..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G014060.2	CsGy6G014060.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005672	transcription factor TFIIA complex
molecular_function	GO:0003743	translation initiation factor activity