CsGy6G012560 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012560
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CEN-like protein 2
Location	Gy14Chr6: 10918886 .. 10920481 (-)
RNA-Seq Expression	CsGy6G012560
Synteny	CsGy6G012560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCAAGTTAACTCACTCTCTCTCACCAGCCCTAAACTACCCTTTTGAAATACTATCTTGAACCTTTTTTTTATTTCTTTTAGTTTCTATGGCGATGGGGAAGATGCCGTCCGATCCTCTCGTGGTTGGAGGAGTAGTCGGAGATGTTGTCGATGCAATTTCTCCTACGGTTAAGATGACCGTCACTTACCATTCAAACAAGAAGGTGTGCAATGGGCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCATTCTTCACACTGGTCTGATCATATACTTTCAATCAAACCCATCTTTTCTTTTCTTTTCTTTTTCTAATGTATATATAATTAGTATTGATCACCGTACTTAATTTATATAGTTTCAACTAATTATTTTTTTCCAGGTCATGACTGATCCAGATGTTCCTGGTCCAAGTGATCCTTACTTGAGAGAACACCTCCACTGGTATCATATTCTAATTCAAGAACCCCATCTGTAAGGGTGTAAAAATGAATCTTAATTTTCAAATAAATAAATAAGTTTCTATAACAATTGAACTATGTTAAAGATTGTCGAAACAAGAATATGTCAAGTATTGTTTGGGAATTGGTTGAATAGTTTTTGTTAGAATATTTTGAACATGTTACTTAGTGTTCTAAAAATCAAAATACAAGGGTTTTAGGTTTCAAAAGTACTTTATATACGAACACTAAAATTTTAAAGGGCATCTTTTGCAACTTGTGTAATATATATCTATCTAATTTTTTTCTCCAATAAAGAATGATTTCTCTTTATCCTTCGACTTAACTAACACATGTTATTAGTAATTAAATCATGTAAACTTACGTTTTCTCTCGCTTTTTGTAAGTCCTCGATTTCAATTGTATAACTACTGAAATAATTTGGATAATATATAACTTTGATATTTCAGGATAGTTACAGACATTCCAGGGACGACGGATGCCACTTTTGGTAAAACTTCATTTTTTTATAATTTTCTTCTGATAAATTTTGTTTATAATATATACATACTAGATACTGATGGGAAAATTAATAAAATATAGGAAAAGAGATAGTAAAATATGAAGAACCAAGTCCAAACATAGGGATACACAGATATGTGTTCCTATTGTACAAGCAAAAAAGAAGACAAACAGTGAAGCCGCCACCACACCCTTCAAGAGACGGTTTTAATTCAAGAAAATTTGCTCTTGATAATCATCTTTCTCTTCCTGTTGCTGCTGTCTATTTCATTGCTCAAAGGCCTACTGCTGCCAGAAGAAGATAACACACACACACACATGTATATATTCAACCCAGAATTATATATTCTAAATAAATTATTATATTATATTTCATCACATAAATTAAATAAAATTTTGGGTTATATATATATATGAATTTTCATGTGTAGCAGAGAGAGGCAGTGACCTTTTCTTGTGCTGTCCTTTATTGTGTTCTCTTTGGTTTATTTGATGTACTAAAACTTTGTATTTCTACTTCTCTATGTATCTGTTTGTTTAAGTTAATTGTCTTGTTTTTAGTTTTCTATTGTTTATAAAAAAAAATCATTTTCTT

mRNA sequence

CACCCAAGTTAACTCACTCTCTCTCACCAGCCCTAAACTACCCTTTTGAAATACTATCTTGAACCTTTTTTTTATTTCTTTTAGTTTCTATGGCGATGGGGAAGATGCCGTCCGATCCTCTCGTGGTTGGAGGAGTAGTCGGAGATGTTGTCGATGCAATTTCTCCTACGGTTAAGATGACCGTCACTTACCATTCAAACAAGAAGGTGTGCAATGGGCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCATTCTTCACACTGGTCATGACTGATCCAGATGTTCCTGGTCCAAGTGATCCTTACTTGAGAGAACACCTCCACTGGATAGTTACAGACATTCCAGGGACGACGGATGCCACTTTTGGAAAAGAGATAGTAAAATATGAAGAACCAAGTCCAAACATAGGGATACACAGATATGTGTTCCTATTGTACAAGCAAAAAAGAAGACAAACAGTGAAGCCGCCACCACACCCTTCAAGAGACGGTTTTAATTCAAGAAAATTTGCTCTTGATAATCATCTTTCTCTTCCTGTTGCTGCTGTCTATTTCATTGCTCAAAGGCCTACTGCTGCCAGAAGAAGATAACACACACACACACATGTATATATTCAACCCAGAATTATATATTCTAAATAAATTATTATATTATATTTCATCACATAAATTAAATAAAATTTTGGGTTATATATATATATGAATTTTCATGTGTAGCAGAGAGAGGCAGTGACCTTTTCTTGTGCTGTCCTTTATTGTGTTCTCTTTGGTTTATTTGATGTACTAAAACTTTGTATTTCTACTTCTCTATGTATCTGTTTGTTTAAGTTAATTGTCTTGTTTTTAGTTTTCTATTGTTTATAAAAAAAAATCATTTTCTT

Coding sequence (CDS)

ATGGCGATGGGGAAGATGCCGTCCGATCCTCTCGTGGTTGGAGGAGTAGTCGGAGATGTTGTCGATGCAATTTCTCCTACGGTTAAGATGACCGTCACTTACCATTCAAACAAGAAGGTGTGCAATGGGCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCATTCTTCACACTGGTCATGACTGATCCAGATGTTCCTGGTCCAAGTGATCCTTACTTGAGAGAACACCTCCACTGGATAGTTACAGACATTCCAGGGACGACGGATGCCACTTTTGGAAAAGAGATAGTAAAATATGAAGAACCAAGTCCAAACATAGGGATACACAGATATGTGTTCCTATTGTACAAGCAAAAAAGAAGACAAACAGTGAAGCCGCCACCACACCCTTCAAGAGACGGTTTTAATTCAAGAAAATTTGCTCTTGATAATCATCTTTCTCTTCCTGTTGCTGCTGTCTATTTCATTGCTCAAAGGCCTACTGCTGCCAGAAGAAGATAA

Protein sequence

MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR*

Homology

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BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 8.9e-69
Identity = 127/176 (72.16%), Postives = 146/176 (82.95%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           MG   SDPLV+G V+G+VVD  +P+VKM+VTY+S+K V NGHEL P+ VT KP+VEV GG
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFT++M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKEIV YE P PNIGIHR
Sbjct: 61  DLRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +VFLL+KQK+RQTV   P  SRD FN+RKFA +N L  PVAAV+F  QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTVLTAP-LSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-67
Identity = 124/176 (70.45%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           MG   SDPLV+G V+G+VVD  +P+VKM+VTY+S+K V NGHEL P+ VT KP+VEV GG
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+EIV YE P PNIGIHR
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +VFLL+KQK+RQT+   P  SRD FN+RKF+ +N L  PVAA +F  QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTLLSAP-LSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

[Close]

BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot
Match: Q41261 (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.2e-67
Identity = 125/178 (70.22%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 5   KMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSN---KKVCNGHELLPNFVTLKPKVEVLG 64
           K+ SDPLV+G V+GDVVD  + TVKM+V Y+SN   K V NGHEL P+ VT  P+VEV G
Sbjct: 4   KVSSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHG 63

Query: 65  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIH 124
           GD+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FGKE+V YE P PNIGIH
Sbjct: 64  GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIH 123

Query: 125 RYVFLLYKQKRR-QTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           R+VFLL+KQK+R Q +  PP   RDGFN+RKF  +N L LPVAAV+F  QR TAARRR
Sbjct: 124 RFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

[Close]

BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-67
Identity = 125/176 (71.02%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M ++ SDPL+VG V+GDVVD     VKMTVTY+S+K+V NGHEL P+ VT KPKVEV GG
Sbjct: 1   MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           D+RSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKEI+ YE P PNIGIHR
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +V+LL+KQ RR +V   P   RD FN+R+FA +N L LPVAAV+F  QR TAARRR
Sbjct: 121 FVYLLFKQTRRGSVVSVP-SYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-65
Identity = 119/176 (67.61%), Postives = 141/176 (80.11%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M     +PLV+G V+G+VVD   P+VKM+V Y++NK V NGHE  P+ VT KP+VEV GG
Sbjct: 1   MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+E+V YE P PNIGIHR
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +VFLL+KQK+RQT+   P  SRD F+SRKF+ +N L  PVAAV+F  QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTISSAP-VSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CsGy6G012560 vs. NCBI nr
Match: KAE8646911.1 (hypothetical protein Csa_021030 [Cucumis sativus])

HSP 1 Score: 369 bits (946), Expect = 8.01e-129
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120

Query: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of CsGy6G012560 vs. NCBI nr
Match: NP_001295832.1 (CEN-like protein 2 [Cucumis sativus] >BAH28258.1 TFL1-like protein [Cucumis sativus])

HSP 1 Score: 363 bits (933), Expect = 7.69e-127
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHS KKVCNGHELLPNFVTLKPKVEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSYKKVCNGHELLPNFVTLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIG 
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGT 120

Query: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of CsGy6G012560 vs. NCBI nr
Match: XP_008458582.1 (PREDICTED: CEN-like protein 2 [Cucumis melo])

HSP 1 Score: 361 bits (927), Expect = 6.33e-126
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKP+VEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPRVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW+VTDIPGTTDATFGKEIVKYEEP PNIGI
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKEIVKYEEPCPNIGI 120

Query: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HRYVFLLYKQKRRQTVKPPP PSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 HRYVFLLYKQKRRQTVKPPPQPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of CsGy6G012560 vs. NCBI nr
Match: XP_038902549.1 (CEN-like protein 2 [Benincasa hispida])

HSP 1 Score: 330 bits (847), Expect = 3.41e-113
Identity = 163/179 (91.06%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+ KM SDPLVVGGV+GDVVDA SPTVKM VTYHSNKKVCNGHELLPNFVTLKPKVEVL
Sbjct: 35  MAVAKMSSDPLVVGGVIGDVVDAFSPTVKMMVTYHSNKKVCNGHELLPNFVTLKPKVEVL 94

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW+VTDIPGTTDATFGKEIVKYE PSPNIGI
Sbjct: 95  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKEIVKYEVPSPNIGI 154

Query: 121 HRYVFLLYKQKRRQTVKPP-PHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFALDN LSLPVAAVYF AQR TAARRR
Sbjct: 155 HRFVFLLYKQKRRQTVKPPHPSTSRDGFNTRKFALDNDLSLPVAAVYFNAQRATAARRR 213

[Close]

BLAST of CsGy6G012560 vs. NCBI nr
Match: XP_022153047.1 (CEN-like protein 2 [Momordica charantia])

HSP 1 Score: 310 bits (794), Expect = 1.12e-105
Identity = 152/176 (86.36%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M    SDPLVVG V+GDVVDA SPTVKMTVTYHSNKKVCNGHELLP FVTLKPKVEVLGG
Sbjct: 1   MAASMSDPLVVGRVIGDVVDAFSPTVKMTVTYHSNKKVCNGHELLPTFVTLKPKVEVLGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FGKE+VKYE PSPNIGIHR
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           +VFLL+KQKRRQTVK  P  SRDGFN+RKFA DN L LPVAAVYF AQR TAARRR
Sbjct: 121 FVFLLFKQKRRQTVKDLPANSRDGFNARKFAQDNDLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL
Match: A0A0A0KB52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 8.52e-128
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG
Sbjct: 1   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 176

[Close]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL
Match: B9ZYL5 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1d PE=2 SV=1)

HSP 1 Score: 363 bits (933), Expect = 3.73e-127
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHS KKVCNGHELLPNFVTLKPKVEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSYKKVCNGHELLPNFVTLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIG 
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGT 120

Query: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL
Match: A0A1S3C8A7 (CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1)

HSP 1 Score: 361 bits (927), Expect = 3.06e-126
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKP+VEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPRVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGI 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW+VTDIPGTTDATFGKEIVKYEEP PNIGI
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKEIVKYEEPCPNIGI 120

Query: 121 HRYVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           HRYVFLLYKQKRRQTVKPPP PSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR
Sbjct: 121 HRYVFLLYKQKRRQTVKPPPQPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL
Match: A0A6J1DHW3 (CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1)

HSP 1 Score: 310 bits (794), Expect = 5.43e-106
Identity = 152/176 (86.36%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M    SDPLVVG V+GDVVDA SPTVKMTVTYHSNKKVCNGHELLP FVTLKPKVEVLGG
Sbjct: 1   MAASMSDPLVVGRVIGDVVDAFSPTVKMTVTYHSNKKVCNGHELLPTFVTLKPKVEVLGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FGKE+VKYE PSPNIGIHR
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           +VFLL+KQKRRQTVK  P  SRDGFN+RKFA DN L LPVAAVYF AQR TAARRR
Sbjct: 121 FVFLLFKQKRRQTVKDLPANSRDGFNARKFAQDNDLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL
Match: A0A6J1FY68 (CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1)

HSP 1 Score: 304 bits (779), Expect = 1.05e-103
Identity = 151/177 (85.31%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M KM SDPLVVG VVGDV+DA SPTVKMTVTYHSNKKV NGHELLPNF+TLKPKVEV GG
Sbjct: 1   MAKM-SDPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVFGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD+TFGKE+VKYE PSPN+GIHR
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPP-HPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178
           +VFLLYKQ RRQTVKPP    SRDGFN+R+FA +N L LPVAAVYF AQR TAARRR
Sbjct: 121 FVFLLYKQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of CsGy6G012560 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 255.0 bits (650), Expect = 4.5e-68
Identity = 125/176 (71.02%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           M ++ SDPL+VG V+GDVVD     VKMTVTY+S+K+V NGHEL P+ VT KPKVEV GG
Sbjct: 1   MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           D+RSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKEI+ YE P PNIGIHR
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHR 120

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +V+LL+KQ RR +V   P   RD FN+R+FA +N L LPVAAV+F  QR TAARRR
Sbjct: 121 FVYLLFKQTRRGSVVSVP-SYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CsGy6G012560 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 241.5 bits (615), Expect = 5.2e-64
Identity = 116/176 (65.91%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 3   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           MG    +PL++G VVGDV+D  +PT KM V+Y + K+V NGHEL P+ V+ KP+VE+ GG
Sbjct: 4   MGTRVIEPLIMGRVVGDVLDFFTPTTKMNVSY-NKKQVSNGHELFPSSVSSKPRVEIHGG 63

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHR 122
           DLRSFFTLVM DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFGKE+V YE P P+IGIHR
Sbjct: 64  DLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHR 123

Query: 123 YVFLLYKQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +VF+L++QK+R+ +  P  PSRD FN+RKFA++  L LPVAAV+F AQR TAAR+R
Sbjct: 124 FVFVLFRQKQRRVIF-PNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of CsGy6G012560 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-56
Identity = 104/170 (61.18%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 9   DPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           +PL+VG V+GDV++  +P+V M VT++SN  V NGHEL P+ +  KP+VE+ G DLRSFF
Sbjct: 6   EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFF 65

Query: 69  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHRYVFLLY 128
           TL+M DPD P PS+PY+RE+LHW+VTDIPGTTDA+FG+EIV+YE P P  GIHRYVF L+
Sbjct: 66  TLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALF 125

Query: 129 KQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           KQ+ RQ VK  P  +R+ FN+  F+    LS PVAAVYF AQR TA RRR
Sbjct: 126 KQRGRQAVKAAPE-TRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

[Close]

BLAST of CsGy6G012560 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-46
Identity = 93/170 (54.71%), Postives = 120/170 (70.59%), Query Frame = 0


Query: 9   DPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           DPL+V  VVGDV+D  + ++ + VTY   ++V NG +L P+ V  KP+VE+ G DLR+F+
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTY-GQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 66

Query: 69  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHRYVFLLY 128
           TLVM DPDVP PS+P+LRE+LHW+VTDIP TT  TFG EIV YE PSP  GIHR VF+L+
Sbjct: 67  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 126

Query: 129 KQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 179
           +Q  RQTV  P    R  FN+R+FA   +L LPVAAV++  QR +    R
Sbjct: 127 RQLGRQTVYAPGW--RQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

[Close]

BLAST of CsGy6G012560 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.9e-43
Identity = 90/163 (55.21%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 9   DPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           DPLVVG VVGDV+D  +  V + VTY  +++V NG +L P+ V  KP VE+ G D R+F+
Sbjct: 7   DPLVVGSVVGDVLDPFTRLVSLKVTY-GHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 66

Query: 69  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHRYVFLLY 128
           TLVM DPDVP PS+P+ RE+LHW+VTDIP TT   FG E+V YE P P  GIHR V +L+
Sbjct: 67  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 126

Query: 129 KQKRRQTVKPPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQR 172
           +Q  RQTV  P    R  FN+R+FA   +L LPVAA YF  QR
Sbjct: 127 RQLGRQTVYAPGW--RQQFNTREFAEIYNLGLPVAASYFNCQR 166

The following BLAST results are available for this feature:

BLAST of CsGy6G012560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH43	8.9e-69	72.16	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]
Q9XH42	1.7e-67	70.45	CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1	[more]
Q41261	2.2e-67	70.22	Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1	[more]
Q9ZNV5	6.4e-67	71.02	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1	[more]
O82088	2.0e-65	67.61	Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1	[more]

BLAST of CsGy6G012560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646911.1	8.01e-129	100.00	hypothetical protein Csa_021030 [Cucumis sativus]	[more]
NP_001295832.1	7.69e-127	98.88	CEN-like protein 2 [Cucumis sativus] >BAH28258.1 TFL1-like protein [Cucumis sati...	[more]
XP_008458582.1	6.33e-126	97.75	PREDICTED: CEN-like protein 2 [Cucumis melo]	[more]
XP_038902549.1	3.41e-113	91.06	CEN-like protein 2 [Benincasa hispida]	[more]
XP_022153047.1	1.12e-105	86.36	CEN-like protein 2 [Momordica charantia]	[more]

BLAST of CsGy6G012560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB52	8.52e-128	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1	[more]
B9ZYL5	3.73e-127	98.88	TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1d PE=2 SV=1	[more]
A0A1S3C8A7	3.06e-126	97.75	CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1	[more]
A0A6J1DHW3	5.43e-106	86.36	CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1	[more]
A0A6J1FY68	1.05e-103	85.31	CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1	[more]

BLAST of CsGy6G012560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27550.1	4.5e-68	71.02	centroradialis	[more]
AT5G03840.1	5.2e-64	65.91	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.0e-56	61.18	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	1.3e-46	54.71	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	2.9e-43	55.21	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 4..178 e-value: 2.0E-55 score: 189.2
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 15..171
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 65..166 e-value: 3.8E-15 score: 56.4
None	No IPR available	PANTHER	PTHR11362:SF48	PROTEIN CENTRORADIALIS-LIKE	coord: 6..177
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 6..177
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 28..169 e-value: 1.49372E-44 score: 142.898
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 68..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012560.2	CsGy6G012560.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus