CsGy6G012545 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTTGGTTGACGTGTACAATAAACCCCCACACAACCCTTCTATTTAACTATTATCTCTCACTCCCAAACATCAAATCTACAAATCGCCATGATCGCTATGGTTCCCCCAAATTCCTCTGATGCCGATGACTCTCCTTCCGTCGGAGCAAGCGCTACGGCTCCTGCTCCATCCCCCGCTGGTGGGTCGACCGGAGATTCTAGCGGCGGTGTTGGGGCTGAGAAATTGAAGGGCTGTTTTGGTGTTCGGGAGCGGCTGAAGAGGCACCGTGAAGAGGTGGCCGGGAAAGTTATGGTGCCGGAGAAATGGGGCAAAGAGGAACTGCTTAAGGATTGGATCGACTATTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATAGCGTCGGCGAGGGCGTCGCTAGCGGCGGAGGGACAGCGGAACAGTCGCCGTTCATGGCGTAGGGTGGAAAGCAGGTGTTGAGATTGGGGAAAATCTGTTTTTAATTAACAACTTTGAATTTATATTTTAATGTTATTTATAGAGAGATTAAAACATAAACACACTTCTTATTTGCTTTTTTTTTCTTCCTTTTTAAATATTTTATTTAGTTTAATATTTGTAATAAAACGTTTGAATTATTTGAGTTTCTAATGTCTTGTTCTATAAATTGGC CCCTTGGTTGACGTGTACAATAAACCCCCACACAACCCTTCTATTTAACTATTATCTCTCACTCCCAAACATCAAATCTACAAATCGCCATGATCGCTATGGTTCCCCCAAATTCCTCTGATGCCGATGACTCTCCTTCCGTCGGAGCAAGCGCTACGGCTCCTGCTCCATCCCCCGCTGGTGGGTCGACCGGAGATTCTAGCGGCGGTGTTGGGGCTGAGAAATTGAAGGGCTGTTTTGGTGTTCGGGAGCGGCTGAAGAGGCACCGTGAAGAGGTGGCCGGGAAAGTTATGGTGCCGGAGAAATGGGGCAAAGAGGAACTGCTTAAGGATTGGATCGACTATTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATAGCGTCGGCGAGGGCGTCGCTAGCGGCGGAGGGACAGCGGAACAGTCGCCGTTCATGGCGTAGGGTGGAAAGCAGGTGTTGAGATTGGGGAAAATCTGTTTTTAATTAACAACTTTGAATTTATATTTTAATGTTATTTATAGAGAGATTAAAACATAAACACACTTCTTATTTGCTTTTTTTTTCTTCCTTTTTAAATATTTTATTTAGTTTAATATTTGTAATAAAACGTTTGAATTATTTGAGTTTCTAATGTCTTGTTCTATAAATTGGC ATGATCGCTATGGTTCCCCCAAATTCCTCTGATGCCGATGACTCTCCTTCCGTCGGAGCAAGCGCTACGGCTCCTGCTCCATCCCCCGCTGGTGGGTCGACCGGAGATTCTAGCGGCGGTGTTGGGGCTGAGAAATTGAAGGGCTGTTTTGGTGTTCGGGAGCGGCTGAAGAGGCACCGTGAAGAGGTGGCCGGGAAAGTTATGGTGCCGGAGAAATGGGGCAAAGAGGAACTGCTTAAGGATTGGATCGACTATTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATAGCGTCGGCGAGGGCGTCGCTAGCGGCGGAGGGACAGCGGAACAGTCGCCGTTCATGGCGTAGGGTGGAAAGCAGGTGTTGA MIAMVPPNSSDADDSPSVGASATAPAPSPAGGSTGDSSGGVGAEKLKGCFGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRNSRRSWRRVESRC* Homology
BLAST of CsGy6G012545 vs. ExPASy Swiss-Prot
Match: Q9M280 (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.9e-14 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy Swiss-Prot
Match: Q9LXJ1 (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.2e-13 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of CsGy6G012545 vs. NCBI nr
Match: KGN46948.1 (hypothetical protein Csa_020684 [Cucumis sativus]) HSP 1 Score: 235 bits (599), Expect = 1.07e-77 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G012545 vs. NCBI nr
Match: TYK18920.1 (uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 185 bits (470), Expect = 4.24e-58 Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CsGy6G012545 vs. NCBI nr
Match: XP_008458586.1 (PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo] >KAA0033406.1 uncharacterized protein E6C27_scaffold111G00580 [Cucumis melo var. makuwa]) HSP 1 Score: 184 bits (467), Expect = 1.22e-57 Identity = 103/120 (85.83%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CsGy6G012545 vs. NCBI nr
Match: KAG7010351.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150 bits (378), Expect = 2.35e-41 Identity = 89/119 (74.79%), Postives = 93/119 (78.15%), Query Frame = 0
BLAST of CsGy6G012545 vs. NCBI nr
Match: KAG6570486.1 (Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (380), Expect = 2.47e-39 Identity = 85/107 (79.44%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy TrEMBL
Match: A0A0A0KBS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152340 PE=4 SV=1) HSP 1 Score: 235 bits (599), Expect = 5.17e-78 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy TrEMBL
Match: A0A5D3D5X1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold28061G00010 PE=4 SV=1) HSP 1 Score: 185 bits (470), Expect = 2.05e-58 Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy TrEMBL
Match: A0A5A7STT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00580 PE=4 SV=1) HSP 1 Score: 184 bits (467), Expect = 5.89e-58 Identity = 103/120 (85.83%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy TrEMBL
Match: A0A1S3C9F3 (uncharacterized protein LOC103497945 OS=Cucumis melo OX=3656 GN=LOC103497945 PE=4 SV=1) HSP 1 Score: 184 bits (467), Expect = 5.89e-58 Identity = 103/120 (85.83%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CsGy6G012545 vs. ExPASy TrEMBL
Match: A0A6J1DHR5 (protein BIC2 OS=Momordica charantia OX=3673 GN=LOC111020610 PE=4 SV=1) HSP 1 Score: 124 bits (311), Expect = 2.30e-34 Identity = 74/101 (73.27%), Postives = 79/101 (78.22%), Query Frame = 0
BLAST of CsGy6G012545 vs. TAIR 10
Match: AT3G44450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of CsGy6G012545 vs. TAIR 10
Match: AT3G52740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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