CsGy6G012450 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	60S acidic ribosomal protein family
Location	Gy14Chr6: 10810029 .. 10810758 (-)
RNA-Seq Expression	CsGy6G012450
Synteny	CsGy6G012450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACACCAGCCCCGGAGCCGATGATGTGAAGTCTATTCTTAATTCAGGTTCTTATATTGCAAACTATTTTTCTTTTAATCATAAATTGATTTGCTTCTCCACGGGTTGTTTTATTGCTTTCGTAGATAGATTTGATGCTATAGGATTTGAAATGATTGGGCTTGGTTCGATTCGAAAGTCTAGGTTAGACTGCATTTTGTTCGTGGTTTAGTTAGGGAGGAGCTGTAAATTAAGTGAAAATCTTAAATGTCTGACATTAAATGATGGGCAGTGTTACTGAATTTGCATTAAGGTAGGGTTTTTAATTTTTATGTACAGTTGGGGCTGAGATAGATGAAGAGAGGATCACCTTGCTCTTAGCGGAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCGCTGCTGGCGGTGCCACTGGTGGTGGTGCAGCAGCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCAGACGATGTAAGTGTTTAAGCTTTTACCCATTTTGATTTGCTTTGATTTGTTCCAATCTGTGAATGATTTGCTCTATGATTTCTATGTTACCTAAATTTTATTTTCCATTTTCTGCAGGATATGGGTTTCAGCCTCTTTGACTAA

mRNA sequence

ATGAAGGTGGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACACCAGCCCCGGAGCCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGAAGAGAGGATCACCTTGCTCTTAGCGGAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCGCTGCTGGCGGTGCCACTGGTGGTGGTGCAGCAGCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCAGACGATGATATGGGTTTCAGCCTCTTTGACTAA

Coding sequence (CDS)

ATGAAGGTGGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACACCAGCCCCGGAGCCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGAAGAGAGGATCACCTTGCTCTTAGCGGAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCGCTGCTGGCGGTGCCACTGGTGGTGGTGCAGCAGCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCAGACGATGATATGGGTTTCAGCCTCTTTGACTAA

Protein sequence

MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGREKLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD*

Homology

[Close]

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-35
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKV+AAYLLAVLGGNTSP ADDVKSIL SVGAE DEE++  LL E+K KDITE+IA+GRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           +L+SVPSGGGAI + A A  A  GG AA   E KKEEKVEEKEESD+DMGFSLFD
Sbjct: 61  RLSSVPSGGGAIDMGAPA--AVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113

[Close]

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-33
Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MK VAAYLLAVL GN SP ADD+ +IL SVG E+D E++ LLL+++ GKDITELIA+GRE
Sbjct: 1   MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           K ASVP GGG +AV+AAA  A   G AA  AE KKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KFASVPCGGGGVAVAAAAPAA---GGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112

[Close]

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot
Match: Q9LXM8 (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-32
Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKV AA+LLAVLGGN +P AD++K I+ +VGA++D E I LLL EV GKDI ELIASGRE
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG +AVSAA   ++GGG AAAPAE KKE K EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGG-VAVSAAP--SSGGGGAAAPAE-KKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.6e-32
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP + D+K+IL SVGAE ++ +I LLL EVKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPS GGG +AV++A  G  GGG A+A AE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASA-AESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-31
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKV+AA+LLA+LGGNTSP  +D+KSIL SVGA+ D+++I LLL++VKGKDITELIASGRE
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           +LASVPSGGG +AV+AAAGG  G   AAA  E KKEEK E  EESD+++GFSLFD
Sbjct: 61  RLASVPSGGG-VAVAAAAGGGGGDAPAAAAEEPKKEEKSE--EESDEELGFSLFD 112

[Close]

BLAST of CsGy6G012450 vs. NCBI nr
Match: XP_004145795.1 (60S acidic ribosomal protein P2B [Cucumis sativus] >KGN46936.1 hypothetical protein Csa_020720 [Cucumis sativus])

HSP 1 Score: 208 bits (529), Expect = 2.81e-67
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. NCBI nr
Match: XP_008458601.1 (PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo] >KAA0033390.1 60S acidic ribosomal protein P2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 5.24e-63
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK+ILNSVG EIDEERITLLL+EVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. NCBI nr
Match: XP_038901119.1 (60S acidic ribosomal protein P2B-like [Benincasa hispida])

HSP 1 Score: 187 bits (475), Expect = 4.83e-59
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPG DDVKSILNSVGAE+D++RI LLL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSA AGGA GGGAA A AEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. NCBI nr
Match: XP_023512871.1 (60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185 bits (470), Expect = 2.79e-58
Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK ILNSVGAE+DE+RI  LL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGA+ ++A AGGA GGGAAAA AEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAAAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. NCBI nr
Match: KAG7010354.1 (60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183 bits (465), Expect = 1.62e-57
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK ILNSVGAE+DE+RI  LL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGA+ ++A AGGA GGGAA A AEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL
Match: A0A0A0KGP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1)

HSP 1 Score: 208 bits (529), Expect = 1.36e-67
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL
Match: A0A5A7SR49 (60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00400 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 2.54e-63
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK+ILNSVG EIDEERITLLL+EVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL
Match: A0A1S3C8T5 (60S acidic ribosomal protein P2B-like OS=Cucumis melo OX=3656 GN=LOC103497955 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 2.54e-63
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK+ILNSVG EIDEERITLLL+EVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL
Match: A0A6J1DJB9 (60S acidic ribosomal protein P2B-like OS=Momordica charantia OX=3673 GN=LOC111020580 PE=3 SV=1)

HSP 1 Score: 183 bits (464), Expect = 1.11e-57
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPGADDVK+ILNSVG E+DE+RI  LL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKNILNSVGVEVDEDRIESLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGA+AV+A AGGA GGGAA A AE+KKEEKVEEKE+SDDD+GFSLFD
Sbjct: 61  KLASVPSGGGAVAVAAPAGGAAGGGAAPAAAEEKKEEKVEEKEDSDDDLGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL
Match: A0A6J1J9Z4 (60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC111483902 PE=3 SV=1)

HSP 1 Score: 182 bits (461), Expect = 3.18e-57
Identity = 98/115 (85.22%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNTSPG DDVK ILNSVGAE+DE+RI  LL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115
           KLASVPSGGGA+ ++A AGGA GGGAA A  EQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAVEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CsGy6G012450 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-33
Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKV AA+LLAVLGGN +P AD++K I+ +VGA++D E I LLL EV GKDI ELIASGRE
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG +AVSAA   ++GGG AAAPAE KKE K EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGG-VAVSAAP--SSGGGGAAAPAE-KKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of CsGy6G012450 vs. TAIR 10
Match: AT3G44590.1 (60S acidic ribosomal protein family )

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-33
Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKV AA+LLAVLGGN +P AD++K I+ +VGA++D E I LLL EV GKDI ELIASGRE
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG +AVSAA   ++GGG AAAPAE KKE K EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGG-VAVSAAP--SSGGGGAAAPAE-KKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of CsGy6G012450 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP + D+K+IL SVGAE ++ +I LLL EVKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPS GGG +AV++A  G  GGG A+A AE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASA-AESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CsGy6G012450 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP + D+K+IL SVGAE ++ +I LLL EVKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPS GGG +AV++A  G  GGG A+A AE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASA-AESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CsGy6G012450 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP + D+K+IL SVGAE ++ +I LLL EVKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPS GGG +AV++A  G  GGG A+A AE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASA-AESKKEEKKEEKEESDDDMGFSLFE 115

The following BLAST results are available for this feature:

BLAST of CsGy6G012450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24415	4.2e-35	74.78	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
P46252	3.9e-33	71.30	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
Q9LXM8	1.9e-32	73.04	60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 ...	[more]
Q9SLF7	9.6e-32	70.69	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]
P41099	1.3e-31	70.43	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]

BLAST of CsGy6G012450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145795.1	2.81e-67	100.00	60S acidic ribosomal protein P2B [Cucumis sativus] >KGN46936.1 hypothetical prot...	[more]
XP_008458601.1	5.24e-63	93.04	PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo] >KAA0033390.1 60...	[more]
XP_038901119.1	4.83e-59	89.57	60S acidic ribosomal protein P2B-like [Benincasa hispida]	[more]
XP_023512871.1	2.79e-58	86.96	60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo]	[more]
KAG7010354.1	1.62e-57	86.09	60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy6G012450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGP6	1.36e-67	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1	[more]
A0A5A7SR49	2.54e-63	93.04	60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C8T5	2.54e-63	93.04	60S acidic ribosomal protein P2B-like OS=Cucumis melo OX=3656 GN=LOC103497955 PE...	[more]
A0A6J1DJB9	1.11e-57	85.22	60S acidic ribosomal protein P2B-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A6J1J9Z4	3.18e-57	85.22	60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC11148390...	[more]

BLAST of CsGy6G012450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44590.2	1.4e-33	73.04	60S acidic ribosomal protein family	[more]
AT3G44590.1	1.4e-33	73.04	60S acidic ribosomal protein family	[more]
AT2G27710.1	6.8e-33	70.69	60S acidic ribosomal protein family	[more]
AT2G27710.2	6.8e-33	70.69	60S acidic ribosomal protein family	[more]
AT2G27710.3	6.8e-33	70.69	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 18..114 e-value: 1.4E-24 score: 86.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..115
None	No IPR available	PANTHER	PTHR21141:SF83	60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE	coord: 2..115
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..59 e-value: 6.8E-27 score: 95.4
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 2..115
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..115 e-value: 3.14489E-33 score: 110.046
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..115 score: 16.974915

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012450.2	CsGy6G012450.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome