CsGy6G012260 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AT-hook motif nuclear-localized protein
Location	Gy14Chr6: 10655858 .. 10657292 (+)
RNA-Seq Expression	CsGy6G012260
Synteny	CsGy6G012260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTACGTACGCTAGCGATTATTCTTGTTTCTTTCCATCGCTCGCCCCCTCCTCCGCCGTAACCGTTAGTTTCTTTTCTTTCTTTCTTTTACGTCATTTTCTTTTTACTTTTCATTTCTTTCCCTTCTTTCTTTAATTTATTATTATTATTTTTCTTCTAAAACTTAAACTACAAATTTAGAAATATATAATAAAACCTAAAGATTTCGAATATTGATCAAATTGCATGAACTAAATTTTAACTACAAGATTGAAGTACAATAAAAAATAAAAATTGGTTGATTTGGTTAAATAGTAATCACTGCTCCTTTCCTTGTAATAAATAATGATTAAATTAAGAAGTTCTTATAGCAAATAGAAAAAAATTAAAATTATTTATCCAATATTCTTTTTAATAAAAATAAACTAATTTGTTATATTTATAATAACTAAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGGTAAGTATATTTTAAGTGTATGTTTCTATTAATGTTATAGATAGATATTCACTAAAAGTTCACGTGAAATTTTGTTATATTTTATAAATATTTTAATTTATTTTACTATGTTTGTAAATGTTCCATAAGTAATCTTACTATGATTTAAATTTTTAAAAAAAAATTATTAATAATGTGGTATATATTTAATTTTGAGTGTGTGACAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGTGTTCATCTTCTTTACTCACTTATCTATATATCAATTCTTTTTCATTATTTGAAACATTATTTCTCTTTTATTCTGGTAATTCCTAGTTTTAATTTTAATTTTAATTTTATGTTTTATTGAATATATAACTAATCATATATAATATAATTTATGTGTGTAATTATAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGGTAGAGTAA

mRNA sequence

ATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGGTAGAGTAA

Coding sequence (CDS)

ATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGGTAGAGTAA

Protein sequence

MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQVE*

Homology

[Close]

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 40  QISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYA---- 99
           + S KKR+GRPRK+          S P      +R RG   G  + ++  T+G ++    
Sbjct: 52  EASGKKRRGRPRKYEANGAPLPSSSVP---LVKKRVRGKLNGFDMKKMHKTIGFHSSGER 111

Query: 100 -------WETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKP 159
                     +G +F P V+ V   E+I  RI +F   G R+ICI+SA G +S+V + +P
Sbjct: 112 FGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQP 171

Query: 160 NTVASILRFEGIFEILQLSGWFDGRDNKKQ------MAISFSTSNGQVFGGIIVRSRLIA 209
           ++    L +EG FEIL LSG F   +N+        M++S +  +G+V GG  V   LIA
Sbjct: 172 DSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGG-GVAGLLIA 231

[Close]

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot
Match: O80834 (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-17
Identity = 62/179 (34.64%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 43  MKKRKGRPRKFND------AVDRRDPQS-TPDSQTKPERRRGPRPGLSISQVLATLGCYA 102
           MK+++GRPRK+        A+      + TP++  K  R RG  PG    Q +A++G   
Sbjct: 97  MKRKRGRPRKYGQDGSVSLALSSSSVSTITPNNSNK--RGRGRPPGSGKKQRMASVGELM 156

Query: 103 WETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASIL 162
             + G  F P V+ V+  E+I  ++  F   G R+IC++SA G+VS+  + +P+     +
Sbjct: 157 PSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 216

Query: 163 RFEGIFEILQLSGWF----DG--RDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           ++EG FEIL LS  +    DG  R+    +++S ++ +G+V GG I    LIAA+PVQV
Sbjct: 217 KYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAI-GGPLIAASPVQV 272

[Close]

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot
Match: Q8GXB3 (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 65/189 (34.39%), Postives = 94/189 (49.74%), Query Frame = 0


Query: 39  KQISMKKRKGRPRKF------------NDAVDRRDPQSTPDSQ-TKPERRRGPRPGLSIS 98
           +Q  +KK++GRPRK+               V ++   S+  S    P+R RG  PG    
Sbjct: 100 EQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRK 159

Query: 99  QVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVII 158
           Q LA LG +   + G  F P V+ V   E+IV ++ +F     R++CI+S  G+VSSV +
Sbjct: 160 QRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTL 219

Query: 159 HKPNTVASILRFEGIFEILQLSGWF------DGRDNKKQMAISFSTSNGQVFGGIIVRSR 209
            +P +    L FEG FEIL L G +        +     +++S S   G V GG I    
Sbjct: 220 REPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGI--GM 279

[Close]

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot
Match: Q8LPN5 (AT-hook motif nuclear-localized protein 12 OS=Arabidopsis thaliana OX=3702 GN=AHL12 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-16
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 43  MKKRKGRPRKFND-AVDRRDPQSTPDSQ-TKPERRRGPRPGLSISQVLATLGCYAWETIG 102
           +K+++GRPRK+ +  V  +   S+P S   +P+R RG  PG    Q LA LG +   + G
Sbjct: 98  VKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAG 157

Query: 103 RDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGI 162
             F P V+ +   E+I  ++ +F     R++CI+S  G++SSV + KP +    L +EG 
Sbjct: 158 LAFAPHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGP 217

Query: 163 FEILQLSGWF------DGRDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           FEI+   G +        R     +++S S  +G +  G +    LIAA  VQV
Sbjct: 218 FEIISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGV--DMLIAANLVQV 269

[Close]

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot
Match: Q8L7L5 (AT-hook motif nuclear-localized protein 11 OS=Arabidopsis thaliana OX=3702 GN=AHL11 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-15
Identity = 57/177 (32.20%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 42  SMKKRKGRPRKF----NDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWE 101
           S+K+++GRPRK+            P  +  S    +R RG  PG    Q L+++G     
Sbjct: 99  SVKRKRGRPRKYGQDGGSVSLALSPSISNVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPS 158

Query: 102 TIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRF 161
           + G  F P V++V+  E+I  ++ +F   G R+IC++SA G+VS+  + +P      + +
Sbjct: 159 STGMSFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIY 218

Query: 162 EGIFEILQLS-GWFDGRDN-----KKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           EG+FE++ LS  + +  DN        +A+S ++ +G+V GG I    LIAA+ VQV
Sbjct: 219 EGLFELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGI-GGPLIAASQVQV 274

[Close]

BLAST of CsGy6G012260 vs. NCBI nr
Match: XP_031743816.1 (AT-hook motif nuclear-localized protein 7 [Cucumis sativus] >XP_031743817.1 AT-hook motif nuclear-localized protein 7 [Cucumis sativus] >KAE8646901.1 hypothetical protein Csa_020759 [Cucumis sativus])

HSP 1 Score: 411 bits (1057), Expect = 1.35e-144
Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR
Sbjct: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120
           DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI
Sbjct: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180
           SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA
Sbjct: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQV 208
           ISFSTSNGQVFGGIIVRSRLIAATPVQ+
Sbjct: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQI 208

[Close]

BLAST of CsGy6G012260 vs. NCBI nr
Match: KAA0033366.1 (AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 2.22e-76
Identity = 133/209 (63.64%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELR   N     ESSDSD+IGD EIDEE RH E     +I +KKR+GRPRK NDAV+R 
Sbjct: 1   MELRDNRNIRAIRESSDSDSIGDDEIDEEHRHCEPRGGMKIPIKKRRGRPRKDNDAVNRP 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120
            P ST DSQTKPERR G  PG   SQVLATLG YAW TI   F P V++V P ENIVDRI
Sbjct: 61  HPPSTADSQTKPERRGGRPPGSGTSQVLATLGGYAWNTIAAQFTPHVIIVQPGENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180
           S F+VP R SICIISA  S+SSV+I K NT+A   +FEG+FEIL+L GWFD R  +K + 
Sbjct: 121 SCFRVPCR-SICIISACSSISSVVILKRNTIARTFKFEGMFEILRLFGWFDDRGREKIIT 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQVE 209
           I+FS  NGQVFGG++V S LIAATPVQVE
Sbjct: 181 ITFSKPNGQVFGGVVV-SLLIAATPVQVE 207

[Close]

BLAST of CsGy6G012260 vs. NCBI nr
Match: XP_008458633.1 (PREDICTED: AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo] >XP_008458634.1 PREDICTED: AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 236 bits (601), Expect = 4.35e-75
Identity = 131/208 (62.98%), Postives = 151/208 (72.60%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELR   N     ESSDSD+IGD EIDEE RH E     +I +KKR+GRPRK NDAV+R 
Sbjct: 1   MELRDNRNIRAIRESSDSDSIGDDEIDEEHRHCEPRGGMKIPIKKRRGRPRKDNDAVNRP 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120
            P ST DSQTKPERR G  PG   SQVLATLG YAW TI   F P V++V P ENIVDRI
Sbjct: 61  HPPSTADSQTKPERRGGRPPGSGTSQVLATLGGYAWNTIAAQFTPHVIIVQPGENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180
           S F+VP R SICIISA  S+SSV+I K NT+A   +FEG+FEIL+L GWFD R  +K + 
Sbjct: 121 SCFRVPCR-SICIISACSSISSVVILKRNTIARTFKFEGMFEILRLFGWFDDRGREKIIT 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQV 208
           I+FS  NGQVFGG++V S LIAATPVQ+
Sbjct: 181 ITFSKPNGQVFGGVVV-SLLIAATPVQI 206

[Close]

BLAST of CsGy6G012260 vs. NCBI nr
Match: KAA0033371.1 (AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa] >TYJ96655.1 AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 225 bits (573), Expect = 5.97e-71
Identity = 129/217 (59.45%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES DSDN+ DGE        IDEE R GE +  K ++MKK KGRPRK
Sbjct: 1   MEPQNRRNFTVKHESPDSDNVADGEQRSIGDEAIDEEDRLGESAGGKTVTMKKIKGRPRK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAP 120
            NDAV+ ++P S+ DSQT P+   G  PG    QVLA+LG YAWET G DF P ++LVAP
Sbjct: 61  -NDAVNGQNPSSSADSQTIPKPPLGHPPGFGKLQVLASLGGYAWETFGGDFTPHLILVAP 120

Query: 121 RENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDG 180
           +ENIV+RIS F +P  R++CIISA GSVSSVII+ PN+VAS L+FEG+FEILQLSGW   
Sbjct: 121 KENIVNRISKFSIPQSRTVCIISAIGSVSSVIIYDPNSVASTLKFEGMFEILQLSGWSYE 180

Query: 181 RDNKKQMAISFSTSNG-QVFGGIIVRSRLIAATPVQV 208
            D  K M ISFS S+G QVFGG++  S +IAATPVQV
Sbjct: 181 GDGIKSMTISFSKSDGNQVFGGVVA-SSIIAATPVQV 215

[Close]

BLAST of CsGy6G012260 vs. NCBI nr
Match: XP_008458631.1 (PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo])

HSP 1 Score: 224 bits (572), Expect = 1.42e-70
Identity = 128/217 (58.99%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES DSDN+ DGE        IDEE R GE +  K ++MKK KGRPRK
Sbjct: 1   MEPQNRRNFTVKHESPDSDNVADGEQRSIGDEAIDEEDRLGESAGGKTVTMKKIKGRPRK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAP 120
            NDAV+ ++P S+ DSQT P+   G  PG    QVLA+LG YAWET G DF P ++LVAP
Sbjct: 61  -NDAVNGQNPSSSADSQTIPKPPLGHPPGFGKLQVLASLGGYAWETFGGDFTPHLILVAP 120

Query: 121 RENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDG 180
           +ENIV+RIS F +P  R++CIISA GSVSSVII+ PN+VAS L+FEG+FEILQLSGW   
Sbjct: 121 KENIVNRISKFSIPQSRTVCIISAIGSVSSVIIYDPNSVASTLKFEGMFEILQLSGWSYE 180

Query: 181 RDNKKQMAISFSTSNG-QVFGGIIVRSRLIAATPVQV 208
            D  K M ISFS S+G QVFGG++  S +IAATPVQ+
Sbjct: 181 GDGIKSMTISFSKSDGNQVFGGVVA-SSIIAATPVQI 215

[Close]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL
Match: A0A5A7STP4 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00150 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 1.08e-76
Identity = 133/209 (63.64%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELR   N     ESSDSD+IGD EIDEE RH E     +I +KKR+GRPRK NDAV+R 
Sbjct: 1   MELRDNRNIRAIRESSDSDSIGDDEIDEEHRHCEPRGGMKIPIKKRRGRPRKDNDAVNRP 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120
            P ST DSQTKPERR G  PG   SQVLATLG YAW TI   F P V++V P ENIVDRI
Sbjct: 61  HPPSTADSQTKPERRGGRPPGSGTSQVLATLGGYAWNTIAAQFTPHVIIVQPGENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180
           S F+VP R SICIISA  S+SSV+I K NT+A   +FEG+FEIL+L GWFD R  +K + 
Sbjct: 121 SCFRVPCR-SICIISACSSISSVVILKRNTIARTFKFEGMFEILRLFGWFDDRGREKIIT 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQVE 209
           I+FS  NGQVFGG++V S LIAATPVQVE
Sbjct: 181 ITFSKPNGQVFGGVVV-SLLIAATPVQVE 207

[Close]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL
Match: A0A1S3C8W2 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497979 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 2.11e-75
Identity = 131/208 (62.98%), Postives = 151/208 (72.60%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELR   N     ESSDSD+IGD EIDEE RH E     +I +KKR+GRPRK NDAV+R 
Sbjct: 1   MELRDNRNIRAIRESSDSDSIGDDEIDEEHRHCEPRGGMKIPIKKRRGRPRKDNDAVNRP 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRI 120
            P ST DSQTKPERR G  PG   SQVLATLG YAW TI   F P V++V P ENIVDRI
Sbjct: 61  HPPSTADSQTKPERRGGRPPGSGTSQVLATLGGYAWNTIAAQFTPHVIIVQPGENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMA 180
           S F+VP R SICIISA  S+SSV+I K NT+A   +FEG+FEIL+L GWFD R  +K + 
Sbjct: 121 SCFRVPCR-SICIISACSSISSVVILKRNTIARTFKFEGMFEILRLFGWFDDRGREKIIT 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQV 208
           I+FS  NGQVFGG++V S LIAATPVQ+
Sbjct: 181 ITFSKPNGQVFGGVVV-SLLIAATPVQI 206

[Close]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL
Match: A0A5D3BDW3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00210 PE=4 SV=1)

HSP 1 Score: 225 bits (573), Expect = 2.89e-71
Identity = 129/217 (59.45%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES DSDN+ DGE        IDEE R GE +  K ++MKK KGRPRK
Sbjct: 1   MEPQNRRNFTVKHESPDSDNVADGEQRSIGDEAIDEEDRLGESAGGKTVTMKKIKGRPRK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAP 120
            NDAV+ ++P S+ DSQT P+   G  PG    QVLA+LG YAWET G DF P ++LVAP
Sbjct: 61  -NDAVNGQNPSSSADSQTIPKPPLGHPPGFGKLQVLASLGGYAWETFGGDFTPHLILVAP 120

Query: 121 RENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDG 180
           +ENIV+RIS F +P  R++CIISA GSVSSVII+ PN+VAS L+FEG+FEILQLSGW   
Sbjct: 121 KENIVNRISKFSIPQSRTVCIISAIGSVSSVIIYDPNSVASTLKFEGMFEILQLSGWSYE 180

Query: 181 RDNKKQMAISFSTSNG-QVFGGIIVRSRLIAATPVQV 208
            D  K M ISFS S+G QVFGG++  S +IAATPVQV
Sbjct: 181 GDGIKSMTISFSKSDGNQVFGGVVA-SSIIAATPVQV 215

[Close]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL
Match: A0A1S3C8E7 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497978 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 6.87e-71
Identity = 128/217 (58.99%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES DSDN+ DGE        IDEE R GE +  K ++MKK KGRPRK
Sbjct: 1   MEPQNRRNFTVKHESPDSDNVADGEQRSIGDEAIDEEDRLGESAGGKTVTMKKIKGRPRK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAP 120
            NDAV+ ++P S+ DSQT P+   G  PG    QVLA+LG YAWET G DF P ++LVAP
Sbjct: 61  -NDAVNGQNPSSSADSQTIPKPPLGHPPGFGKLQVLASLGGYAWETFGGDFTPHLILVAP 120

Query: 121 RENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDG 180
           +ENIV+RIS F +P  R++CIISA GSVSSVII+ PN+VAS L+FEG+FEILQLSGW   
Sbjct: 121 KENIVNRISKFSIPQSRTVCIISAIGSVSSVIIYDPNSVASTLKFEGMFEILQLSGWSYE 180

Query: 181 RDNKKQMAISFSTSNG-QVFGGIIVRSRLIAATPVQV 208
            D  K M ISFS S+G QVFGG++  S +IAATPVQ+
Sbjct: 181 GDGIKSMTISFSKSDGNQVFGGVVA-SSIIAATPVQI 215

[Close]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL
Match: A0A0A0KBM8 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150520 PE=4 SV=1)

HSP 1 Score: 204 bits (520), Expect = 3.36e-63
Identity = 123/219 (56.16%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES+DS N+ DGE        ID+E R GE +  +  +MKKRK R  K
Sbjct: 1   MEPQDRINFTVKHESTDSYNMEDGEQSSIGDRVIDKEDRLGESTGGRTTTMKKRKERSTK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRR-GPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVA 120
            ND +D ++P S+ DSQT P R   G  PG    QVLA+LG YAW+T  RDF P ++LVA
Sbjct: 61  -NDTIDGKNPSSSADSQTIPNRPPLGHPPGFGKLQVLASLGGYAWDTFSRDFTPHIILVA 120

Query: 121 PRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFD 180
           P ENIV+RISNF VP  R++CIISA G VSS+IIH PN+VAS L+FEG FEILQLSGW  
Sbjct: 121 PGENIVNRISNFSVPRSRTVCIISAVGLVSSIIIHDPNSVASTLKFEGTFEILQLSGWSH 180

Query: 181 GRDNKKQMAISFSTSNG--QVFGGIIVRSRLIAATPVQV 208
             D+ + M ISFS  +G  QVFGG +  S LIAATPVQV
Sbjct: 181 EGDDIRLMTISFSKLDGRNQVFGGAVA-SSLIAATPVQV 217

[Close]

BLAST of CsGy6G012260 vs. TAIR 10
Match: AT4G00200.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-18
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 40  QISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYA---- 99
           + S KKR+GRPRK+          S P      +R RG   G  + ++  T+G ++    
Sbjct: 52  EASGKKRRGRPRKYEANGAPLPSSSVP---LVKKRVRGKLNGFDMKKMHKTIGFHSSGER 111

Query: 100 -------WETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKP 159
                     +G +F P V+ V   E+I  RI +F   G R+ICI+SA G +S+V + +P
Sbjct: 112 FGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQP 171

Query: 160 NTVASILRFEGIFEILQLSGWFDGRDNKKQ------MAISFSTSNGQVFGGIIVRSRLIA 209
           ++    L +EG FEIL LSG F   +N+        M++S +  +G+V GG  V   LIA
Sbjct: 172 DSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGG-GVAGLLIA 231

[Close]

BLAST of CsGy6G012260 vs. TAIR 10
Match: AT2G45850.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 62/179 (34.64%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 43  MKKRKGRPRKFND------AVDRRDPQS-TPDSQTKPERRRGPRPGLSISQVLATLGCYA 102
           MK+++GRPRK+        A+      + TP++  K  R RG  PG    Q +A++G   
Sbjct: 97  MKRKRGRPRKYGQDGSVSLALSSSSVSTITPNNSNK--RGRGRPPGSGKKQRMASVGELM 156

Query: 103 WETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASIL 162
             + G  F P V+ V+  E+I  ++  F   G R+IC++SA G+VS+  + +P+     +
Sbjct: 157 PSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 216

Query: 163 RFEGIFEILQLSGWF----DG--RDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           ++EG FEIL LS  +    DG  R+    +++S ++ +G+V GG I    LIAA+PVQV
Sbjct: 217 KYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAI-GGPLIAASPVQV 272

[Close]

BLAST of CsGy6G012260 vs. TAIR 10
Match: AT2G45850.2 (AT hook motif DNA-binding family protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 62/179 (34.64%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 43  MKKRKGRPRKFND------AVDRRDPQS-TPDSQTKPERRRGPRPGLSISQVLATLGCYA 102
           MK+++GRPRK+        A+      + TP++  K  R RG  PG    Q +A++G   
Sbjct: 97  MKRKRGRPRKYGQDGSVSLALSSSSVSTITPNNSNK--RGRGRPPGSGKKQRMASVGELM 156

Query: 103 WETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASIL 162
             + G  F P V+ V+  E+I  ++  F   G R+IC++SA G+VS+  + +P+     +
Sbjct: 157 PSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 216

Query: 163 RFEGIFEILQLSGWF----DG--RDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           ++EG FEIL LS  +    DG  R+    +++S ++ +G+V GG I    LIAA+PVQV
Sbjct: 217 KYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAI-GGPLIAASPVQV 272

[Close]

BLAST of CsGy6G012260 vs. TAIR 10
Match: AT1G63470.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17
Identity = 65/189 (34.39%), Postives = 94/189 (49.74%), Query Frame = 0


Query: 39  KQISMKKRKGRPRKF------------NDAVDRRDPQSTPDSQ-TKPERRRGPRPGLSIS 98
           +Q  +KK++GRPRK+               V ++   S+  S    P+R RG  PG    
Sbjct: 100 EQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRK 159

Query: 99  QVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVII 158
           Q LA LG +   + G  F P V+ V   E+IV ++ +F     R++CI+S  G+VSSV +
Sbjct: 160 QRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTL 219

Query: 159 HKPNTVASILRFEGIFEILQLSGWF------DGRDNKKQMAISFSTSNGQVFGGIIVRSR 209
            +P +    L FEG FEIL L G +        +     +++S S   G V GG I    
Sbjct: 220 REPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGI--GM 279

[Close]

BLAST of CsGy6G012260 vs. TAIR 10
Match: AT1G63480.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.3e-17
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 43  MKKRKGRPRKFND-AVDRRDPQSTPDSQ-TKPERRRGPRPGLSISQVLATLGCYAWETIG 102
           +K+++GRPRK+ +  V  +   S+P S   +P+R RG  PG    Q LA LG +   + G
Sbjct: 98  VKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAG 157

Query: 103 RDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGI 162
             F P V+ +   E+I  ++ +F     R++CI+S  G++SSV + KP +    L +EG 
Sbjct: 158 LAFAPHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGP 217

Query: 163 FEILQLSGWF------DGRDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQV 209
           FEI+   G +        R     +++S S  +G +  G +    LIAA  VQV
Sbjct: 218 FEIISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGV--DMLIAANLVQV 269

The following BLAST results are available for this feature:

BLAST of CsGy6G012260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V3E0	3.2e-17	34.95	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O80834	5.4e-17	34.64	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q8GXB3	1.6e-16	34.39	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q8LPN5	4.6e-16	32.76	AT-hook motif nuclear-localized protein 12 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8L7L5	3.0e-15	32.20	AT-hook motif nuclear-localized protein 11 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of CsGy6G012260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743816.1	1.35e-144	99.52	AT-hook motif nuclear-localized protein 7 [Cucumis sativus] >XP_031743817.1 AT-h...	[more]
KAA0033366.1	2.22e-76	63.64	AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo var. mak...	[more]
XP_008458633.1	4.35e-75	62.98	PREDICTED: AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis me...	[more]
KAA0033371.1	5.97e-71	59.45	AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. mak...	[more]
XP_008458631.1	1.42e-70	58.99	PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis me...	[more]

BLAST of CsGy6G012260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STP4	1.08e-76	63.64	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3C8W2	2.11e-75	62.98	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497979 ...	[more]
A0A5D3BDW3	2.89e-71	59.45	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3C8E7	6.87e-71	58.99	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497978 ...	[more]
A0A0A0KBM8	3.36e-63	56.16	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_6G1505...	[more]

BLAST of CsGy6G012260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00200.1	2.3e-18	34.95	AT hook motif DNA-binding family protein	[more]
AT2G45850.1	3.8e-18	34.64	AT hook motif DNA-binding family protein	[more]
AT2G45850.2	3.8e-18	34.64	AT hook motif DNA-binding family protein	[more]
AT1G63470.1	1.1e-17	34.39	AT hook motif DNA-binding family protein	[more]
AT1G63480.1	3.3e-17	32.76	AT hook motif DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1330.80		coord: 106..209 e-value: 1.9E-13 score: 52.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..43
None	No IPR available	PANTHER	PTHR31500:SF45	DUF296 DOMAIN PROTEIN	coord: 25..208
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 105..208
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 107..208 e-value: 3.6E-15 score: 56.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 100..209 score: 23.286203
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 107..208 e-value: 1.82762E-11 score: 56.825
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 25..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012260.2	CsGy6G012260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding