CsGy6G012060 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012060
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Cyclin-dependent kinases regulatory subunit
Location	Gy14Chr6: 10493139 .. 10493944 (-)
RNA-Seq Expression	CsGy6G012060
Synteny	CsGy6G012060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAGTAAGCAATTTTGTTTTCTTAGTTTCAAATTTATGTGTCTTGATTTTGTTACGAAAGGAAGAATTATCTTATTGATTGAGAAGAAACTTAGTTCAATAGTTGAATTCTTATTTCCTGTTTAGGTATCACTCTTGAGAGACCCTATGAAATAGATATTATTATGTGGACAATTTTTCCCCTTATTTCTAATCTTTTATATTTTCATATGATCTTGATATTCTCTCTTTGATTTGACTGATGGTTGCATGAAGTTGAAACGATGTTTTTGAGTATTTCGGATAGAAGTTATATGAAAAAGGATTGAGAATTGAGGGCTTATGACTTATTCATTAGACTAAATCCCTTCTGATTTGCCAATTGTGCAATTCCCTCTATGCAATTAGTGAGCAATGGACGCTTCTGTTGGGCATAAGCATAGGAACATTATCATCTTTGATTTTCTTGGCTTTCTTATTGAACTCAAGTTAGTTGTTCTAAACAAAAGGGTGCTTTCCAAATCTGTTTTACTACTCGTTTCATGGAAGCATTTTGTTATACTCTTAGACCTTTAATCTTATGTGCAGAATGAATGGCGTGCAATTGGAGTCCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATTGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAACAGGAGAATCGCACTCAACAAAATGCACTTGCTGCTAAATGA

mRNA sequence

ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTCCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATTGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAACAGGAGAATCGCACTCAACAAAATGCACTTGCTGCTAAATGA

Coding sequence (CDS)

ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTCCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATTGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAACAGGAGAATCGCACTCAACAAAATGCACTTGCTGCTAAATGA

Protein sequence

MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK*

Homology

[Close]

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot
Match: O23249 (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-30
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQ 74
          EN+ Q
Sbjct: 78 ENQAQ 82

[Close]

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot
Match: A2XCH8 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=39946 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-28
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLN+QQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQQQ 77

Query: 69 E 70
          E
Sbjct: 78 E 78

[Close]

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot
Match: Q6PS57 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-28
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLN+QQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQQQ 77

Query: 69 E 70
          E
Sbjct: 78 E 78

[Close]

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot
Match: Q9SJJ5 (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CKS2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.5e-27
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQ+ 
Sbjct: 18 RHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQEH 77

Query: 69 E 70
          +
Sbjct: 78 Q 78

[Close]

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot
Match: P55933 (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX=5791 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.4e-20
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR 61
          RHV+LPP+VAK  PKNRLLSE EWR +GVQQS+GWVHYA H PEPHI+LFRR
Sbjct: 20 RHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPHILLFRR 71

[Close]

BLAST of CsGy6G012060 vs. NCBI nr
Match: KGN46891.1 (hypothetical protein Csa_021096 [Cucumis sativus])

HSP 1 Score: 177 bits (450), Expect = 2.49e-56
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR 60
          MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR
Sbjct: 1  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR 60

Query: 61 PLNYQQQQENRTQQNALAAK 80
          PLNYQQQQENRTQQNALAAK
Sbjct: 61 PLNYQQQQENRTQQNALAAK 80

[Close]

BLAST of CsGy6G012060 vs. NCBI nr
Match: XP_011657043.1 (LOW QUALITY PROTEIN: cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus])

HSP 1 Score: 155 bits (391), Expect = 3.30e-47
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          ENRTQQNALAAK
Sbjct: 78 ENRTQQNALAAK 89

[Close]

BLAST of CsGy6G012060 vs. NCBI nr
Match: XP_008465423.1 (PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo] >KAA0037300.1 cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo var. makuwa] >TYK24184.1 cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (367), Expect = 1.52e-43
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          ENRTQQNALAAK
Sbjct: 78 ENRTQQNALAAK 89

[Close]

BLAST of CsGy6G012060 vs. NCBI nr
Match: XP_038902899.1 (cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida])

HSP 1 Score: 139 bits (351), Expect = 4.18e-41
Identity = 66/72 (91.67%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          EN  QQN LAAK
Sbjct: 78 ENLAQQNVLAAK 89

[Close]

BLAST of CsGy6G012060 vs. NCBI nr
Match: XP_018854502.1 (cyclin-dependent kinases regulatory subunit 1-like [Juglans regia] >XP_040991781.1 cyclin-dependent kinases regulatory subunit 1-like [Juglans microcarpa x Juglans regia] >XP_042955613.1 cyclin-dependent kinases regulatory subunit 1 [Carya illinoinensis] >XP_042955614.1 cyclin-dependent kinases regulatory subunit 1 [Carya illinoinensis] >KAG2674589.1 hypothetical protein I3760_13G143300 [Carya illinoinensis] >KAG6632237.1 hypothetical protein CIPAW_13G144800 [Carya illinoinensis] >KAG6682493.1 hypothetical protein I3842_13G144400 [Carya illinoinensis] >KAG7950678.1 hypothetical protein I3843_13G127600 [Carya illinoinensis])

HSP 1 Score: 139 bits (350), Expect = 5.77e-41
Identity = 65/70 (92.86%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALA 78
          EN+TQQN LA
Sbjct: 78 ENQTQQNVLA 87

[Close]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL
Match: A0A0A0KGK5 (Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus OX=3659 GN=Csa_6G148330 PE=3 SV=1)

HSP 1 Score: 177 bits (450), Expect = 1.21e-56
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR 60
          MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR
Sbjct: 1  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR 60

Query: 61 PLNYQQQQENRTQQNALAAK 80
          PLNYQQQQENRTQQNALAAK
Sbjct: 61 PLNYQQQQENRTQQNALAAK 80

[Close]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL
Match: A0A5D3DKQ6 (Cyclin-dependent kinases regulatory subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00180 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 7.34e-44
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          ENRTQQNALAAK
Sbjct: 78 ENRTQQNALAAK 89

[Close]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL
Match: A0A1S3CNU7 (Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103503041 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 7.34e-44
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          ENRTQQNALAAK
Sbjct: 78 ENRTQQNALAAK 89

[Close]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL
Match: A0A2I4GKZ4 (Cyclin-dependent kinases regulatory subunit OS=Juglans regia OX=51240 GN=LOC109016561 PE=3 SV=1)

HSP 1 Score: 139 bits (350), Expect = 2.79e-41
Identity = 65/70 (92.86%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALA 78
          EN+TQQN LA
Sbjct: 78 ENQTQQNVLA 87

[Close]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL
Match: A0A6J1K8L9 (Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC111491633 PE=3 SV=1)

HSP 1 Score: 138 bits (348), Expect = 5.81e-41
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPP+VAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQQNALAAK 80
          EN  QQN LAAK
Sbjct: 78 ENLAQQNVLAAK 89

[Close]

BLAST of CsGy6G012060 vs. TAIR 10
Match: AT2G27960.1 (cyclin-dependent kinase-subunit 1 )

HSP 1 Score: 131.7 bits (330), Expect = 2.6e-31
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQ
Sbjct: 18 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRPEPHIMLFRRPLNYQQQQ 77

Query: 69 ENRTQ 74
          EN+ Q
Sbjct: 78 ENQAQ 82

[Close]

BLAST of CsGy6G012060 vs. TAIR 10
Match: AT2G27970.1 (CDK-subunit 2 )

HSP 1 Score: 120.9 bits (302), Expect = 4.6e-28
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 9  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQ 68
          RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQ+ 
Sbjct: 18 RHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQEH 77

Query: 69 E 70
          +
Sbjct: 78 Q 78

The following BLAST results are available for this feature:

BLAST of CsGy6G012060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23249	3.7e-30	92.31	Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2XCH8	1.5e-28	93.44	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=3...	[more]
Q6PS57	1.5e-28	93.44	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SJJ5	6.5e-27	86.89	Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P55933	3.4e-20	78.85	Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX...	[more]

BLAST of CsGy6G012060 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46891.1	2.49e-56	100.00	hypothetical protein Csa_021096 [Cucumis sativus]	[more]
XP_011657043.1	3.30e-47	100.00	LOW QUALITY PROTEIN: cyclin-dependent kinases regulatory subunit 1 [Cucumis sati...	[more]
XP_008465423.1	1.52e-43	95.83	PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo] >KA...	[more]
XP_038902899.1	4.18e-41	91.67	cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]	[more]
XP_018854502.1	5.77e-41	92.86	cyclin-dependent kinases regulatory subunit 1-like [Juglans regia] >XP_040991781...	[more]

BLAST of CsGy6G012060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGK5	1.21e-56	100.00	Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A5D3DKQ6	7.34e-44	95.83	Cyclin-dependent kinases regulatory subunit OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CNU7	7.34e-44	95.83	Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A2I4GKZ4	2.79e-41	92.86	Cyclin-dependent kinases regulatory subunit OS=Juglans regia OX=51240 GN=LOC1090...	[more]
A0A6J1K8L9	5.81e-41	90.28	Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CsGy6G012060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27960.1	2.6e-31	92.31	cyclin-dependent kinase-subunit 1	[more]
AT2G27970.1	4.6e-28	86.89	CDK-subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 9..23 score: 61.54 coord: 31..45 score: 75.9 coord: 46..60 score: 71.28
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 9..63 e-value: 4.6E-28 score: 109.2
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 9..61 e-value: 5.0E-24 score: 84.3
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 6..75 e-value: 5.2E-28 score: 99.0
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 9..74
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 1..79
None	No IPR available	PANTHER	PTHR23415:SF37	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012060.2	CsGy6G012060.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0007346	regulation of mitotic cell cycle
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity