CsGy6G011940 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G011940
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRep_fac-A_C domain-containing protein
LocationGy14Chr6: 10397485 .. 10400572 (+)
RNA-Seq ExpressionCsGy6G011940
SyntenyCsGy6G011940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACCATTTCCCCAAACAGTGTGAAGAACAGTGTTGTATTTTTAGTTTTCAGGAACAAAGCAGTTTCCTTTAGAGGAGTAATGGAAAATGGGAAGCCAATAACAACCATGTGCGCAGTGATGGCTATGGATTACACCAATTTCTGTTACAGAGTTTGTTCTATCTGTGAGAGAACACTTCCTGTTAACCCATCTTCTCTTTGCAAATTCTGCAACTTCAACGCCTTTAATCCCGGTTCTTCCTCCTCTAAACGCGTCTTCCGTCTTCTTGTGAGTATTTCCGTTTTTTTCTTACTTGGGAATTTGATTTCAGTATGTGTGAAAATCTCTTATGATGTTCTGTAGTTGGAATTCCGCTTGAATTTGCATGGGGAAAATTTCGGGTTTTGTTTGTTTTTGAGTGTTAATTCATTGTGGGGACTCGATTATATGTTTTTTTTTTTTTGGAGGAAATGTTTTTGTTCTGTAAAATGGGTTTGGGCTTGTGCATTGCATCGTGTTCTTTACATTGAGGTTCTGATTTTGGGTCCTATATTTCCATTGTTTTTTGGGCAGATGTCAATTGCAACGGATAAGAAAGTACAAACTGTAATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTTGACTTTGCTAAGCTACATCCTTTTGCTGGTAAATCCTCTTTGTATTTGTGAGTTACTTCTAATTGGTTTGCATGAGATTCTCCTTCAATGGACGTGAAGGATTTAGAAGGAGACGCATTTTAAAAAACTTTCATTAAACAACATATAGAAAACAACCTAAACTAAAAGGCAGAGTCCTTTTGCCTAAGAGAAGATGCTCGGAGAATATGTTACTAATAGAATTTGTGGGGAAATTTTTTAGTGCCTTTTATGAAATGTAGCTCAATCTTCCTTCACATAAGCTGTTTCGTTTCCTTTTGATTGCTAGTTGAAATTTTGTTGCGTACTGCAGCTGAAACTGTAAGTGAAATTCTGGAGGGAGAGATGCTTAGAATCACAATATCTAAACCAAAGAATGGCAATGCACAACACTCAAGAGTTGTCCAAATTGTTCCTCTGAGTTCATGTTTTCAACCAGCAATTATTAGACTGAGGGAATTGTATGGGTAAAAAGCTGCTGTTAATTTTCGTTTGTGATTAGTAATTACTTCTTATTATGCATTTTCCCACATGCCTTTTCTCTTTGTTGACAAACTATCATTTGTGGATTGGGTTATTAGATGGGTTCCAACTATCATCTAGATTTGGGTTTTTAGATAATATGATTTTCTATCTTAAAACCAATTCACAATGAGAAGAATAACTTATCTTAAAACCAATTCACAATAAGAAGAGTAACTCGCCCTGATTTTTTCAATATTGGATCCTCAACATACTATCTCATGAAAATGACTCTTTAGATTCACCATTCTTGGTCCCTTTTTGGACCAAATGCTCATTTGAGTTCCATGAGTTCTGATATCATATATGACAACGTGGGTTCACATCTCAAAATTAATTGATAATAAGAGAAGTAACATTTCTATCTTATAAACAATGTGAGGTCCTTTGATTTTTCTAACGTGGGATCCTCTACATGGGGAAATGTTTAGTCAACATATAAGATCCAAAATCTAAACAATTCTCATGGATAAATGTAATATCTATTTGTTGATGTAAATATTATTTTTACTACAAAAAAGGTGTATAATGCGCTGAACATCACTATTTCAGATATTAGGGAATTGAGATGCATCAATACTTATCAATATAGGGAGGGAGGAAAGTAAAACGAGCTAGTTCCTTGTAGGTGTTCTAGGAGAGATATGGGAGCACTTAACTTCTCCTTAGCTGTATTGTTGTAGTTTTGATTATTTCATAGGGTGTATCTATAGCGGCGGACATGCATAAAAATAAGATCTATTGAAGTGGTTTTGGGATTTCATGTTCTAATGTGGAACTATAATAACTTGATATTAACTATGATGAGAGAAAAGACTCAAGTTAAGCTCCGACTTATGAAATAATCTGGTGTCTTTTACATCTTTAATTGTGAACGACCAATCCTTTTGCTTTTCCACTGAACAAGAGCTAGTATGACAGTCTTCAGCCGGTGAGCATCGGTGGAGCTGCACTATGGGATTGTCATTTTATCTATCCAAACAAAAAGAAGCATCAAATTCAAGTCTGCCCCTTCAACTCTCATTCTTCTTTGTCAAATGTTACAAAATTGAGCAGATGTGTGAAATTGTCCCTTCAGCTTCTATATCTTTTCAATTTAGTTATGTATAGTGCTCAAACATCTCCTCTCAACCTCTTGACATTGTAGCAGCCACTAGTCAAATCTGTTCCTTTTGTGGCTCTCTTGTCTGTATCCCTTGTTCTGAAACAGTTAAACTTCATAGATATTCCTTGAGTGCAATACTGCTCAAACTGCTATTTTTTCTGAGTTCCTTAAGAACAAAAATTAGGGTCTAAATTACAACAGTTCGTCTAAAAGAGTGTTGAAATTGAAATGACTGGTGTAGAATATGATAGACCAGTTGGTTTTCTTGACTTGTTTTTGGTTGGCTAGGTATCTCATGACATATATTTTTATAGTTGAAATATATATCTCTAATGAAAACAATAGTTGAAATATACATACAAAATGTGTACTTGATTTTGTTTGCAGAGTAAATTCCAATTGATACCTATGGTTTCATTTGCTGTTGGTAATGGACAAAACAAGCAGTGGTTCCATAAAGTGAAGAGATGTGATGTGGGCACCTCAAAATAACCTAATCCCATCCCATCCCAAGAATGGACAATATTTTGTTATTTGATGTGATTTTGTGTGCAGTGGAGAAGACTATTGTAACTTGAAAGGAAGAAAGAAGGTAGGCAACAGTTACCTATATGTGGTGTACTGTAATGAAATTTTATCGATGGATTTACGATAATGAGTCTAAGTCACAAAAGTAGTTGAAGTTGTGATCAGGTTAACCTAAATATTTTGCAAACTGAATAG

mRNA sequence

CGACCATTTCCCCAAACAGTGTGAAGAACAGTGTTGTATTTTTAGTTTTCAGGAACAAAGCAGTTTCCTTTAGAGGAGTAATGGAAAATGGGAAGCCAATAACAACCATGTGCGCAGTGATGGCTATGGATTACACCAATTTCTGTTACAGAGTTTGTTCTATCTGTGAGAGAACACTTCCTGTTAACCCATCTTCTCTTTGCAAATTCTGCAACTTCAACGCCTTTAATCCCGGTTCTTCCTCCTCTAAACGCGTCTTCCGTCTTCTTATGTCAATTGCAACGGATAAGAAAGTACAAACTGTAATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTTGACTTTGCTAAGCTACATCCTTTTGCTGCTGAAACTGTAAGTGAAATTCTGGAGGGAGAGATGCTTAGAATCACAATATCTAAACCAAAGAATGGCAATGCACAACACTCAAGAGTTGTCCAAATTGTTCCTCTGAGTTCATGTTTTCAACCAGCAATTATTAGACTGAGGGAATTGTATGGAGTAAATTCCAATTGATACCTATGGTTTCATTTGCTGTTGGTAATGGACAAAACAAGCAGTGGTTCCATAAAGTGAAGAGATGTGATGTGGGCACCTCAAAATAACCTAATCCCATCCCATCCCAAGAATGGACAATATTTTGTTATTTGATGTGATTTTGTGTGCAGTGGAGAAGACTATTGTAACTTGAAAGGAAGAAAGAAGGTAGGCAACAGTTACCTATATGTGGTGTACTGTAATGAAATTTTATCGATGGATTTACGATAATGAGTCTAAGTCACAAAAGTAGTTGAAGTTGTGATCAGGTTAACCTAAATATTTTGCAAACTGAATAG

Coding sequence (CDS)

ATGGAAAATGGGAAGCCAATAACAACCATGTGCGCAGTGATGGCTATGGATTACACCAATTTCTGTTACAGAGTTTGTTCTATCTGTGAGAGAACACTTCCTGTTAACCCATCTTCTCTTTGCAAATTCTGCAACTTCAACGCCTTTAATCCCGGTTCTTCCTCCTCTAAACGCGTCTTCCGTCTTCTTATGTCAATTGCAACGGATAAGAAAGTACAAACTGTAATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTTGACTTTGCTAAGCTACATCCTTTTGCTGCTGAAACTGTAAGTGAAATTCTGGAGGGAGAGATGCTTAGAATCACAATATCTAAACCAAAGAATGGCAATGCACAACACTCAAGAGTTGTCCAAATTGTTCCTCTGAGTTCATGTTTTCAACCAGCAATTATTAGACTGAGGGAATTGTATGGAGTAAATTCCAATTGA

Protein sequence

MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVFRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN*
Homology
[Close]
BLAST of CsGy6G011940 vs. NCBI nr
Match: KGN46888.2 (hypothetical protein Csa_020864 [Cucumis sativus])

HSP 1 Score: 326 bits (835), Expect = 1.60e-112
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60
           MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF
Sbjct: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60

Query: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI 120
           RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI
Sbjct: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI 120

Query: 121 SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 159
           SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN
Sbjct: 121 SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 159

[Close]
BLAST of CsGy6G011940 vs. NCBI nr
Match: XP_031742644.1 (uncharacterized protein LOC101220454 [Cucumis sativus])

HSP 1 Score: 318 bits (816), Expect = 1.67e-109
Identity = 159/167 (95.21%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60
           MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF
Sbjct: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60

Query: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFA--------AETVSEILE 120
           RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFA        AETVSEILE
Sbjct: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAVEILLRTAAETVSEILE 120

Query: 121 GEMLRITISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 159
           GEMLRITISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN
Sbjct: 121 GEMLRITISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 167

[Close]
BLAST of CsGy6G011940 vs. NCBI nr
Match: XP_008465398.1 (PREDICTED: uncharacterized protein LOC103503028 [Cucumis melo])

HSP 1 Score: 313 bits (801), Expect = 2.55e-107
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSS-LCKFCNFNAFNPGSSSSKRV 60
           MENGKPITTMCAV+AMDYTNFCYRVCSICERTLPVNPSS LCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENGKPITTMCAVIAMDYTNFCYRVCSICERTLPVNPSSSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FRLLMSIATDK+VQTVICFDRVA+VLFGCSADEFFDFAKLHPFAAETVSEIL GEM RIT
Sbjct: 61  FRLLMSIATDKEVQTVICFDRVAKVLFGCSADEFFDFAKLHPFAAETVSEILVGEMFRIT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 159
           ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN
Sbjct: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 160

[Close]
BLAST of CsGy6G011940 vs. NCBI nr
Match: XP_022943430.1 (uncharacterized protein LOC111448196 isoform X2 [Cucurbita moschata])

HSP 1 Score: 290 bits (742), Expect = 5.77e-98
Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 157

[Close]
BLAST of CsGy6G011940 vs. NCBI nr
Match: XP_022943427.1 (uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata] >XP_022943428.1 uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata] >KAG7010655.1 hypothetical protein SDJN02_27450, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290 bits (742), Expect = 6.40e-98
Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 157

[Close]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match: A0A0A0KEN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147650 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 7.59e-110
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60
           MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF
Sbjct: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60

Query: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI 120
           RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI
Sbjct: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI 120

Query: 121 SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYG 155
           SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYG
Sbjct: 121 SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYG 155

[Close]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match: A0A1S3CNQ4 (uncharacterized protein LOC103503028 OS=Cucumis melo OX=3656 GN=LOC103503028 PE=4 SV=1)

HSP 1 Score: 313 bits (801), Expect = 1.23e-107
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSS-LCKFCNFNAFNPGSSSSKRV 60
           MENGKPITTMCAV+AMDYTNFCYRVCSICERTLPVNPSS LCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENGKPITTMCAVIAMDYTNFCYRVCSICERTLPVNPSSSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FRLLMSIATDK+VQTVICFDRVA+VLFGCSADEFFDFAKLHPFAAETVSEIL GEM RIT
Sbjct: 61  FRLLMSIATDKEVQTVICFDRVAKVLFGCSADEFFDFAKLHPFAAETVSEILVGEMFRIT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 159
           ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN
Sbjct: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 160

[Close]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match: A0A6J1FXT2 (uncharacterized protein LOC111448196 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448196 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 2.80e-98
Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 157

[Close]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match: A0A6J1FWW9 (uncharacterized protein LOC111448196 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448196 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 3.10e-98
Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 157

[Close]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match: A0A6J1J8M2 (uncharacterized protein LOC111483608 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111483608 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 7.29e-97
Identity = 141/157 (89.81%), Postives = 149/157 (94.90%), Query Frame = 0 

Query: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60
           MEN K ITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKRITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 157

[Close]
BLAST of CsGy6G011940 vs. TAIR 10
Match: AT2G28105.1 (CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 83/157 (52.87%), Postives = 111/157 (70.70%), Query Frame = 0 

Query: 8   TTMCAVMAMDYTNFCYRVCSICERTLPVN-----PSSLCKFCNFNAFNPGSSSSKRVFRL 67
           T +C ++A+D T++CYRVCS C+R LP +      SS CKFC        S   K ++R+
Sbjct: 6   TVLCTLLAVDLTDYCYRVCSRCQRVLPSDNNGFASSSFCKFCK-------SKEPKLLYRI 65

Query: 68  LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITISK 127
           LMSIATD  V+TVICFDR A VLFGCSADEFF F KL+P AA  V+++ +GEMLR+T+++
Sbjct: 66  LMSIATDASVKTVICFDRAATVLFGCSADEFFHFTKLNPLAASMVNQVFDGEMLRMTLTR 125

Query: 128 PKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGVNSN 160
           P+N NAQH RV  +VPL S  QPAI+ LR++   N++
Sbjct: 126 PQNRNAQHMRVASVVPLRSGVQPAIVTLRQICTKNAS 155

The following BLAST results are available for this feature:
BLAST of CsGy6G011940 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G011940 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46888.21.60e-112100.00hypothetical protein Csa_020864 [Cucumis sativus][more]
XP_031742644.11.67e-10995.21uncharacterized protein LOC101220454 [Cucumis sativus][more]
XP_008465398.12.55e-10796.25PREDICTED: uncharacterized protein LOC103503028 [Cucumis melo][more]
XP_022943430.15.77e-9890.45uncharacterized protein LOC111448196 isoform X2 [Cucurbita moschata][more]
XP_022943427.16.40e-9890.45uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata] >XP_0229434... [more]
BLAST of CsGy6G011940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEN77.59e-110100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147650 PE=4 SV=1[more]
A0A1S3CNQ41.23e-10796.25uncharacterized protein LOC103503028 OS=Cucumis melo OX=3656 GN=LOC103503028 PE=... [more]
A0A6J1FXT22.80e-9890.45uncharacterized protein LOC111448196 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FWW93.10e-9890.45uncharacterized protein LOC111448196 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J8M27.29e-9789.81uncharacterized protein LOC111483608 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CsGy6G011940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28105.11.0e-4252.87CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR0160... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..141
e-value: 2.9E-13
score: 51.5
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G011940.2CsGy6G011940.2mRNA