CsGy6G010660 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G010660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Clathrin light chain
Location	Gy14Chr6: 9141472 .. 9144295 (-)
RNA-Seq Expression	CsGy6G010660
Synteny	CsGy6G010660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACACTGCGTTCATCGTCACCGCAACAACTCCCTAAACCTCAACAAACTCAGCAATTTTCCAATTCACGGAGGGAGACAACCACATTTCTCAACAATGGCTTCCTTCGACACCTTCACCAACGAAGAACACGAACACGAACACCACCACCACCACCATTCCCCTACAGACCAACCCTTTGATGATGATGCCTACATGGCTTTTGACTCTACTCTCCCCTCTCAACCATACGACTCTTCAACCCCTTTCTCTCCCTCCCACGATATTTCCTCCCCCGACCACCAACCTCAACCTCCCCCTTCCTTTTTCGAAGATAACGTCATTTCCGACATCCACTCTCCTGGAAATACCACTAATCCCAATTTGTCTGACGCTTACGACTTTGGAGTTTCTAATCCTAATCCTGACTATGTATCTCCCTTTCATTCTGCTGACGCTGATGCAGACCATGACAATGCCGCCGCTCCCGCCGTTGGTGGTGGTGCTTTTGACGATGGTGGTCTTTTTGCCTCTGATGGACCGGTTCTCCCCGACCCCAGTGAAATGCGGGAGGAAGGCAATGCTCGACGCGAATGGCGACGGTACGTTTTTTTTTTTTTTTTTTATTACCGTTAATTTTTTCTTCTTCTTGAGAGATTGGAGTGCTTTTAGATCTGTGATTTTATCATTTTGGGAAGGAATGAAATGTTTCCTTGGTGGGTTCATTTTTGAGCTGGAGATTGAAATGGAATGTCTTGAGATTTTCCATTCTCTTCATAGTGACAGGAAGAAGTTTACCCAATAGCCTAAATTGTGAGTGCAGACGGAGGTTCAAATCTTCTTTGTTTCTAACTTTCAACCCGCTAATCTCATGCGTGCGTAGTCTCATGATCTATATAGATCGTGTTTATTGTGACTTTCACTGATTGGATTCATTACTGGAGAAATTTTTGTAAGGAACTATGAATAGTTAGTCATTTGTTGCGACATATATGATATTAAATATGTTGGTGTATTTGTTTATTGTCATTTACTTTCTGTCTGATACTGGAATGTTCAAATATTGTAGTCCTGTGCCTGGTACAAGACAAATATTGGTTGCAGATTTGTCCTAACATCACGTGTTTGCATAAACGTCCAACATATTAGTAAGACCAATTATATACAAGTTTTTTTATAGTATTTTATGTAATATATCTATGGGAACAGAAAAAAGGGCTACGCTTAATTCTGTCTGCTTGAAGAAGTTTTTATCTGATTCATTGGGAAGTTTGATACTGTGCAAAATTCTTATCTCTATTACGCATCATTTTTGTTAGCTGGCTTCATGGGCCACAGTAGTTTCAATTTTCAAGTTGCAGGGTCGTAATGGTTACCCAGGTTACATTGGTCTTGGAATTTCTTTTAATCCTTGGCTAATTGTAAAGGTTGGGCTGTGATCATTTTGAATTTTCTGTCTTGTTGCACAATCTAAGTCAGATGAGGTGGAATGGGAATTGTTTTGGAACCATATTTCTCTTTTATCTCTTAATTTCAAGAGAAATTGGTTTCTCATCTTTTTTAATCTGTTCTTAGCTATTTGCTATTAATCTGAAAACTTTATAGTGCAGTCAAAATGCCATAGATCTTGAGGACAAAGAGAAGAAAGAAAAGGAGATGAGGAATCAAATAATTAATGAAGCTGAAGAGTATAAAGCATCCTTTTATGAGAAAAGGAGGGTCAATTGTGAAACAAATAAGGCTCACAATAGAGAAAGAGAGAAGGTGAAACCTCTGAAAGCATTGTGTATACACTGATCTTCTTTACCCTGCATCCTATCAATGCCTTCTTGCTATGTATTGTTACTTATTTTTCAAATCTTTTCCAGCTTTACCATGCTAACCAGGAAAGATTCCACAAAGAAGCTGACAAACATTACTGGAAAGCAATTGCAGAGATCATCCCGCGTGAGGTACCTAATATTGAGAAGAGAAGAGGAAAGAAAGATCCTGACAAGAAGCCTTCAATATTGGTCGTTCAGGGTCCAAAACCTGGAAAGCCAACCGATCTAGCACGATTGAGGCAGATCTTGTTGAAGTTGAAACAGACTCCTCCACCTCATATGATGCCTCCTCCACCCAAACCGGCCAAAGATGAAAAGGATGGCAAAGATGGCAAAGATGGAGAAGGTGGCAAGGATGGAAAGGATAGCAAGGATGGAAAAGATACAAAGGAAGGGACGGAGAACAAAGGTGGAAAGGAAGCAAGTGAAGGGACAGAAACCAAAGATTCTAAGGAAGAAGGGAAGGAAGTTGATGAGAAGAAAGCTTCTTCACCAGCTACAGTTCTCACACCTACTTCTCCAGCAATAAATATGGATGCCAATGGCACTCCTGATCAACCCATAATAGAGGTTGAGGCTCCTCCTCCTCCTGTTGCTGATGCCGAACAAGCAGTTCTGTTGGTGTCACCTTCTGCAGAGTAAGAAATTATTAATACTTCATCTTATGTTTTATTGTAACTGAATGATTATTTTTCTCTGTTCACAATTTATCACAGGGAATAAGGAGGAAGCTTTCGTTATGGCCATGCTGCTTTGCATTCCCTGCAGCGTGGGATTTGACAGCTCTCTTGTTGAGACTTAGAATTTAGGCCGATTTGTCATTGAATTTTATTATCATCTCTTCGAGACTGAGCTTCTCTTATATACTCCTTTTGTTACAGATGATAGAAAAGGTAATAATACAGACTTGCAAAGTTGTAGTAGAGCAGCTCATGTTATTTGTCACACATAATTAATTATCCTAGGGAATATTCACGAGTAGTAATGGTTATTGAACCAATCACTAGGAATAGAATAGCTGC

mRNA sequence

GAACACTGCGTTCATCGTCACCGCAACAACTCCCTAAACCTCAACAAACTCAGCAATTTTCCAATTCACGGAGGGAGACAACCACATTTCTCAACAATGGCTTCCTTCGACACCTTCACCAACGAAGAACACGAACACGAACACCACCACCACCACCATTCCCCTACAGACCAACCCTTTGATGATGATGCCTACATGGCTTTTGACTCTACTCTCCCCTCTCAACCATACGACTCTTCAACCCCTTTCTCTCCCTCCCACGATATTTCCTCCCCCGACCACCAACCTCAACCTCCCCCTTCCTTTTTCGAAGATAACGTCATTTCCGACATCCACTCTCCTGGAAATACCACTAATCCCAATTTGTCTGACGCTTACGACTTTGGAGTTTCTAATCCTAATCCTGACTATGTATCTCCCTTTCATTCTGCTGACGCTGATGCAGACCATGACAATGCCGCCGCTCCCGCCGTTGGTGGTGGTGCTTTTGACGATGGTGGTCTTTTTGCCTCTGATGGACCGGTTCTCCCCGACCCCAGTGAAATGCGGGAGGAAGGCAATGCTCGACGCGAATGGCGACGTCAAAATGCCATAGATCTTGAGGACAAAGAGAAGAAAGAAAAGGAGATGAGGAATCAAATAATTAATGAAGCTGAAGAGTATAAAGCATCCTTTTATGAGAAAAGGAGGGTCAATTGTGAAACAAATAAGGCTCACAATAGAGAAAGAGAGAAGCTTTACCATGCTAACCAGGAAAGATTCCACAAAGAAGCTGACAAACATTACTGGAAAGCAATTGCAGAGATCATCCCGCGTGAGGTACCTAATATTGAGAAGAGAAGAGGAAAGAAAGATCCTGACAAGAAGCCTTCAATATTGGTCGTTCAGGGTCCAAAACCTGGAAAGCCAACCGATCTAGCACGATTGAGGCAGATCTTGTTGAAGTTGAAACAGACTCCTCCACCTCATATGATGCCTCCTCCACCCAAACCGGCCAAAGATGAAAAGGATGGCAAAGATGGCAAAGATGGAGAAGGTGGCAAGGATGGAAAGGATAGCAAGGATGGAAAAGATACAAAGGAAGGGACGGAGAACAAAGGTGGAAAGGAAGCAAGTGAAGGGACAGAAACCAAAGATTCTAAGGAAGAAGGGAAGGAAGTTGATGAGAAGAAAGCTTCTTCACCAGCTACAGTTCTCACACCTACTTCTCCAGCAATAAATATGGATGCCAATGGCACTCCTGATCAACCCATAATAGAGGTTGAGGCTCCTCCTCCTCCTGTTGCTGATGCCGAACAAGCAGTTCTGTTGGTGTCACCTTCTGCAGAGGAATAAGGAGGAAGCTTTCGTTATGGCCATGCTGCTTTGCATTCCCTGCAGCGTGGGATTTGACAGCTCTCTTGTTGAGACTTAGAATTTAGGCCGATTTGTCATTGAATTTTATTATCATCTCTTCGAGACTGAGCTTCTCTTATATACTCCTTTTGTTACAGATGATAGAAAAGGTAATAATACAGACTTGCAAAGTTGTAGTAGAGCAGCTCATGTTATTTGTCACACATAATTAATTATCCTAGGGAATATTCACGAGTAGTAATGGTTATTGAACCAATCACTAGGAATAGAATAGCTGC

Coding sequence (CDS)

ATGGCTTCCTTCGACACCTTCACCAACGAAGAACACGAACACGAACACCACCACCACCACCATTCCCCTACAGACCAACCCTTTGATGATGATGCCTACATGGCTTTTGACTCTACTCTCCCCTCTCAACCATACGACTCTTCAACCCCTTTCTCTCCCTCCCACGATATTTCCTCCCCCGACCACCAACCTCAACCTCCCCCTTCCTTTTTCGAAGATAACGTCATTTCCGACATCCACTCTCCTGGAAATACCACTAATCCCAATTTGTCTGACGCTTACGACTTTGGAGTTTCTAATCCTAATCCTGACTATGTATCTCCCTTTCATTCTGCTGACGCTGATGCAGACCATGACAATGCCGCCGCTCCCGCCGTTGGTGGTGGTGCTTTTGACGATGGTGGTCTTTTTGCCTCTGATGGACCGGTTCTCCCCGACCCCAGTGAAATGCGGGAGGAAGGCAATGCTCGACGCGAATGGCGACGTCAAAATGCCATAGATCTTGAGGACAAAGAGAAGAAAGAAAAGGAGATGAGGAATCAAATAATTAATGAAGCTGAAGAGTATAAAGCATCCTTTTATGAGAAAAGGAGGGTCAATTGTGAAACAAATAAGGCTCACAATAGAGAAAGAGAGAAGCTTTACCATGCTAACCAGGAAAGATTCCACAAAGAAGCTGACAAACATTACTGGAAAGCAATTGCAGAGATCATCCCGCGTGAGGTACCTAATATTGAGAAGAGAAGAGGAAAGAAAGATCCTGACAAGAAGCCTTCAATATTGGTCGTTCAGGGTCCAAAACCTGGAAAGCCAACCGATCTAGCACGATTGAGGCAGATCTTGTTGAAGTTGAAACAGACTCCTCCACCTCATATGATGCCTCCTCCACCCAAACCGGCCAAAGATGAAAAGGATGGCAAAGATGGCAAAGATGGAGAAGGTGGCAAGGATGGAAAGGATAGCAAGGATGGAAAAGATACAAAGGAAGGGACGGAGAACAAAGGTGGAAAGGAAGCAAGTGAAGGGACAGAAACCAAAGATTCTAAGGAAGAAGGGAAGGAAGTTGATGAGAAGAAAGCTTCTTCACCAGCTACAGTTCTCACACCTACTTCTCCAGCAATAAATATGGATGCCAATGGCACTCCTGATCAACCCATAATAGAGGTTGAGGCTCCTCCTCCTCCTGTTGCTGATGCCGAACAAGCAGTTCTGTTGGTGTCACCTTCTGCAGAGGAATAA

Protein sequence

MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSPDHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDNAAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE*

Homology

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BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.8e-81
Identity = 197/357 (55.18%), Postives = 237/357 (66.39%), Query Frame = 0


Query: 37  DSTLPSQPYDSSTPFSPSHDISSPDH--QPQPPPSFFEDNVISDIHSPGNTTNPNLSDAY 96
           D   P+Q +      S   D    D+  + Q PP+  +    S  +  G+  +PN    Y
Sbjct: 6   DGDFPAQTHSP----SEHEDFGGYDNFSEAQQPPTQHQSGGFSSFN--GDPASPN---GY 65

Query: 97  DFGVSNPNPDYVSPFHSADADADHDNAAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEG 156
            FG S+PN D+ SPF S+  DA+ +       GGG+  D  +FASDGP+LPDP+EMREEG
Sbjct: 66  GFGASSPNHDFSSPFESSVNDANGN-------GGGSGGD-AIFASDGPILPDPNEMREEG 125

Query: 157 NARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKL 216
             RREWRR N I LE+KEKKEKEMRNQII EAE++K +FYEKR    ETNK  NRE+EKL
Sbjct: 126 FQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKL 185

Query: 217 YHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDL 276
           Y ANQE+FHKE DKHYWKAIAE+IPREVPNIEK+RGKKDPDKKPS+ V+QGPKPGKPTDL
Sbjct: 186 YWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDL 245

Query: 277 ARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENK 336
            R+RQI LKLK  PPPHMMPPPP PAKD KDGKD KD   GKD K  KDGKD       K
Sbjct: 246 GRMRQIFLKLKTNPPPHMMPPPP-PAKDAKDGKDAKD---GKDAKTGKDGKDA------K 305

Query: 337 GGKEASEGTETKDSKEEGKEVDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEA 392
           GGK+A    + KD K    +V E+K  SPA   +  +   +  A+G  ++P+   EA
Sbjct: 306 GGKDAK---DLKDGKPADPKVTEEKRPSPAKDASVETAKPDAAASGEGEKPVAVTEA 332

[Close]

BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.2e-57
Identity = 148/296 (50.00%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 22  SPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSPDHQPQPPPSFFEDNVISDIHS 81
           SP   PFDDD+++ FD+  P+                     P P  +F           
Sbjct: 11  SPAASPFDDDSFLRFDAAAPA---------------------PAPADAF----------- 70

Query: 82  PGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADAD-HDNA-AAPAVGGGAFDDGGLFAS 141
                 P   + Y F      PD  SPF   +A+   HD+  AAP               
Sbjct: 71  ------PPSPEPYAF-----RPDAPSPFGMPEANGSLHDDPFAAPD------------ND 130

Query: 142 DGPVLPDPSEM-REEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRR 201
           +GPVLP P++M  +EG   REWRRQNAI LE+KEKKEKEMRNQII +A+E+K +F EKR+
Sbjct: 131 NGPVLPPPNQMGADEGFLLREWRRQNAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRK 190

Query: 202 VNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPD--K 261
           +N ET+K  NREREKLY ANQE+FH  ADK YWKAI+E+IP E+ NIEKR  KKD D  K
Sbjct: 191 LNVETSKDQNREREKLYLANQEKFHAGADKQYWKAISELIPHEIANIEKRGAKKDKDKEK 250

Query: 262 KPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKDG 313
           KP I+V+QGPKPGKPTD++R+RQILLKLK TPPPHM PPPP  A   KDG  GKDG
Sbjct: 251 KPGIVVIQGPKPGKPTDMSRMRQILLKLKHTPPPHMKPPPPPAAATGKDGAAGKDG 251

[Close]

BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.4e-53
Identity = 130/220 (59.09%), Postives = 160/220 (72.73%), Query Frame = 0


Query: 133 DGGLFASDGPVLPDPSEM-REEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKA 192
           D  L   DGP+LP P++M  EEG   REWRRQNAI LE+KE+KEKE+R QI+ EAEE+K 
Sbjct: 87  DPELDGGDGPILPPPAQMGAEEGILLREWRRQNAIVLEEKERKEKELRAQILAEAEEFKK 146

Query: 193 SFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGK 252
           +FYEKR  NCETNK HNREREK++ A QE+FH EADK YWK+I+E+IP E+  IEK RGK
Sbjct: 147 AFYEKRIQNCETNKVHNREREKIFVAGQEKFHAEADKQYWKSISELIPHEIATIEK-RGK 206

Query: 253 KDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKD 312
           KD DKKPSI V+QGPKPGKPTDL+R+RQIL+KLK  PPPHMM PPP  A      KDG  
Sbjct: 207 KDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKHAPPPHMMQPPPASA-----AKDGAK 266

Query: 313 GEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEE 352
            +G KDG  +     TK+  E+K  ++ + G+  +  KE+
Sbjct: 267 -DGAKDGTPA-PANGTKKPAESK--EKPANGSPAEAEKEQ 296

[Close]

BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot
Match: Q6Z3A8 (Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.6e-51
Identity = 129/251 (51.39%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 111 SADADADHDNAAAPAVGGGAF--DDGG----LFA-----SDGPVLPDPSEMREEGNARRE 170
           S D    H +     +GGG    D GG    LFA      DGPVLP P  M+EEG  RRE
Sbjct: 95  SGDVMNGHVDQIGDVMGGGVVVGDGGGIDDDLFAGAGDGDDGPVLPPPEAMKEEGILRRE 154

Query: 171 WRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQ 230
           WRRQNA+ LE+KE+KE+E R +II EA+E+K SF EKR++N +TN+A NR+REKL+ A Q
Sbjct: 155 WRRQNALMLEEKERKERERRGEIIAEADEFKRSFAEKRKLNGDTNRAQNRDREKLFLAKQ 214

Query: 231 ERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPD--------KKPSILVVQGPKPGKP 290
           E+FH EA+K YWKAIAE++P E+P +EKR  +++          K+P ++VVQG KPGKP
Sbjct: 215 EKFHGEAEKQYWKAIAEMVPHEIPGLEKRGKRREKQSAEANAKAKQPGVVVVQGTKPGKP 274

Query: 291 TDLARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKDGEGGKDGKDSKDGKDTKEGT 343
           TDL+R+RQ+L+KLKQTPPPHM PPPP+PAKD      G D +  KDG+  K   + ++  
Sbjct: 275 TDLSRMRQVLMKLKQTPPPHMAPPPPQPAKD-----TGGDTDANKDGEAEKAAGEIEKKA 334

[Close]

BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-49
Identity = 119/211 (56.40%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 115 DADHDNAAAPAVGGGAFDDG-GLFAS----DGPVLPDPSEMR-EEGNARREWRRQNAIDL 174
           D+  D  AAP+   GA+ +G G+F S    DGP+LP PSEM  +EG A REWRRQNAI L
Sbjct: 43  DSVDDVFAAPSSDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQL 102

Query: 175 EDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADK 234
           E+KEK+EKE+  QII EA++YK  F++K  V CE NKA NRE+EKLY  NQE+F+ E+ K
Sbjct: 103 EEKEKREKELLKQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSK 162

Query: 235 HYWKAIAEIIPREVPNIEKRRGKKDPD--KKPSILVVQGPKPGKPTDLARLRQILLKLKQ 294
           +YWKAIAE++P+EVP IEKRRGKK+    KKP++ V+QGPKPGKPTDL R+RQIL+KLK 
Sbjct: 163 NYWKAIAELVPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKH 222

Query: 295 TPPPHM----MPPPPKPAKDEKDGKDGKDGE 314
            PP H+     PP  + A   K+  + K  E
Sbjct: 223 NPPSHLKLTSQPPSEEAAAPPKNVPETKPTE 253

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BLAST of CsGy6G010660 vs. NCBI nr
Match: XP_011656953.1 (clathrin light chain 1 [Cucumis sativus] >KAE8646860.1 hypothetical protein Csa_020622 [Cucumis sativus])

HSP 1 Score: 791 bits (2042), Expect = 4.92e-288
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP
Sbjct: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN
Sbjct: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120

Query: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180
           AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN
Sbjct: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180

Query: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240
           QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR
Sbjct: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240

Query: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300
           EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA
Sbjct: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300

Query: 301 KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA 360
           KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA
Sbjct: 301 KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA 360

Query: 361 SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE 412
           SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE
Sbjct: 361 SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE 412

[Close]

BLAST of CsGy6G010660 vs. NCBI nr
Match: KAA0062081.1 (clathrin light chain 1 [Cucumis melo var. makuwa])

HSP 1 Score: 686 bits (1770), Expect = 1.52e-246
Identity = 368/417 (88.25%), Postives = 383/417 (91.85%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKEMR
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEMR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLY+ANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYYANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPPPVAD+EQAV LVSPSAE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADSEQAVPLVSPSAE 415

[Close]

BLAST of CsGy6G010660 vs. NCBI nr
Match: XP_008448281.1 (PREDICTED: clathrin light chain 1 [Cucumis melo])

HSP 1 Score: 682 bits (1759), Expect = 7.18e-245
Identity = 368/418 (88.04%), Postives = 383/418 (91.63%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKE+R
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEVR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE 412
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPP VAD+EQAV LVSPSAEE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPP-VADSEQAVPLVSPSAEE 415

[Close]

BLAST of CsGy6G010660 vs. NCBI nr
Match: TYK04938.1 (clathrin light chain 1 [Cucumis melo var. makuwa])

HSP 1 Score: 680 bits (1754), Expect = 3.99e-244
Identity = 367/417 (88.01%), Postives = 382/417 (91.61%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKE+R
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEVR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPP VAD+EQAV LVSPSAE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPP-VADSEQAVPLVSPSAE 414

[Close]

BLAST of CsGy6G010660 vs. NCBI nr
Match: XP_038900435.1 (LOW QUALITY PROTEIN: clathrin light chain 1 [Benincasa hispida])

HSP 1 Score: 582 bits (1499), Expect = 2.39e-204
Identity = 333/423 (78.72%), Postives = 362/423 (85.58%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFDTFTNEE E + HHH  SPT QPFDDD Y+ +DS+LPS P+DSSTPFSPS DI+S 
Sbjct: 66  MASFDTFTNEELEQQQHHH--SPTAQPFDDDGYVGYDSSLPSHPHDSSTPFSPSDDITSA 125

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           D  P PPPSFFED+VIS     G+TTNPN SDAYDFGVSNPNPDY SPF S  AD +HDN
Sbjct: 126 DQHPHPPPSFFEDDVIS----AGDTTNPNFSDAYDFGVSNPNPDYASPFDSVHADGNHDN 185

Query: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180
           AAA A GGG FDDGG+F SDGPVLPDPSEMREEG+ARREWRRQNAIDLE+KE+KEKEMRN
Sbjct: 186 AAA-AGGGGGFDDGGIFVSDGPVLPDPSEMREEGHARREWRRQNAIDLEEKEQKEKEMRN 245

Query: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240
           QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQE+FHKEAD+HYWKAIAEIIPR
Sbjct: 246 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQEKFHKEADQHYWKAIAEIIPR 305

Query: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300
           EVPNIEKRRGKKD DKKPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPP KPA
Sbjct: 306 EVPNIEKRRGKKDADKKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPP-KPA 365

Query: 301 KDEKDGKDGKDGEGGKDG--KDSKDGKDTKEGTENKGGKEASE-------GTETKDSKEE 360
           KD KDGK+ KD + GKD   KDSKDGKDTKEG E+KGGKEA E       GTETKD+++E
Sbjct: 366 KDGKDGKE-KDSKDGKDNEEKDSKDGKDTKEGKEDKGGKEAKEAKEAKEEGTETKDTEDE 425

Query: 361 GKEVDEKKASSPATVLTPTSPAINMDANGT--PDQPIIEVEAPPPPVADAEQAVLLVSPS 412
           GKEV++KKAS PA   TPTSPA  MD +GT  PDQP IEVEAPP  + DA+QAVLLV PS
Sbjct: 426 GKEVEDKKASPPAAGHTPTSPAKTMDTDGTLTPDQPKIEVEAPP--LVDADQAVLLV-PS 476

[Close]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL
Match: A0A0A0KD26 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G128590 PE=3 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 1.33e-287
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP
Sbjct: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN
Sbjct: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120

Query: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180
           AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN
Sbjct: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180

Query: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240
           QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR
Sbjct: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240

Query: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300
           EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA
Sbjct: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300

Query: 301 KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA 360
           KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA
Sbjct: 301 KDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDEKKA 360

Query: 361 SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411
           SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE
Sbjct: 361 SSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411

[Close]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL
Match: A0A5A7V8R6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004290 PE=3 SV=1)

HSP 1 Score: 686 bits (1770), Expect = 7.34e-247
Identity = 368/417 (88.25%), Postives = 383/417 (91.85%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKEMR
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEMR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLY+ANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYYANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPPPVAD+EQAV LVSPSAE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADSEQAVPLVSPSAE 415

[Close]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL
Match: A0A1S3BJB2 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103490517 PE=3 SV=1)

HSP 1 Score: 682 bits (1759), Expect = 3.48e-245
Identity = 368/418 (88.04%), Postives = 383/418 (91.63%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKE+R
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEVR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAEE 412
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPP VAD+EQAV LVSPSAEE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPP-VADSEQAVPLVSPSAEE 415

[Close]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL
Match: A0A5D3C0Z6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001510 PE=3 SV=1)

HSP 1 Score: 680 bits (1754), Expect = 1.93e-244
Identity = 367/417 (88.01%), Postives = 382/417 (91.61%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD FTNEEHE +HHHH  SPT QPFDDD YM +DS LPSQPYDSSTPFSPSHD+S  
Sbjct: 1   MASFDAFTNEEHEQQHHHH--SPTAQPFDDDGYMGYDSRLPSQPYDSSTPFSPSHDVSPA 60

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           + QPQ PPSFFED+VISDIH+PGNTT PNLSDAYDFGVSNPNPDYVSPF S DADADHDN
Sbjct: 61  EQQPQAPPSFFEDDVISDIHTPGNTTTPNLSDAYDFGVSNPNPDYVSPFDSVDADADHDN 120

Query: 121 AAAPAVGGGA-FDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMR 180
           AAA AVGGG  FDDGGLF SDGPVLPDPSEMREEGNARREWRRQNAIDLE+KEKKEKE+R
Sbjct: 121 AAAAAVGGGGGFDDGGLFVSDGPVLPDPSEMREEGNARREWRRQNAIDLEEKEKKEKEVR 180

Query: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240
           NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP
Sbjct: 181 NQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIP 240

Query: 241 REVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKP 300
           REVPNIEKRRGKKDPD KPSI+VVQGPKPGKPTDL+R+RQILLKLKQTPPPHMMPPPPK 
Sbjct: 241 REVPNIEKRRGKKDPDNKPSIVVVQGPKPGKPTDLSRMRQILLKLKQTPPPHMMPPPPKL 300

Query: 301 AKDEKDGKDGKDGEGGKDGKDSK-----DGKDTKEGTENKGGKEASEGTETKDSKEEGKE 360
           AKD KDGKDGKDGE GKDGKDSK     DGKDTKEG E+KGG EA+ GT TKD+KEEGKE
Sbjct: 301 AKDNKDGKDGKDGEDGKDGKDSKEKDSKDGKDTKEGKEDKGGNEATVGTGTKDAKEEGKE 360

Query: 361 VDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEAPPPPVADAEQAVLLVSPSAE 411
           VDEKKASSPA VLTPTSPAINMDANGTPDQPIIEVEAPPP VAD+EQAV LVSPSAE
Sbjct: 361 VDEKKASSPAAVLTPTSPAINMDANGTPDQPIIEVEAPPP-VADSEQAVPLVSPSAE 414

[Close]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL
Match: A0A6J1CGW6 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111011316 PE=3 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 1.04e-194
Identity = 305/395 (77.22%), Postives = 338/395 (85.57%), Query Frame = 0


Query: 1   MASFDTFTNEEHEHEHHHHHHSPTDQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSP 60
           MASFD F+N+EH+ + HH   SPT +PFDDD ++ +DS LPSQ YDSST FSP+ DISS 
Sbjct: 68  MASFDAFSNDEHDDQQHH---SPTTRPFDDDDFIGYDSHLPSQRYDSSTTFSPADDISSA 127

Query: 61  DHQPQPPPSFFEDNVISDIHSPGNTTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDN 120
           D  P+ PPSFFE++V+SD+H+  NT  PNLSD YDFG S+PNPDYVSPF   DAD DHDN
Sbjct: 128 DQLPRAPPSFFEEDVVSDVHTAANTNIPNLSDVYDFGGSDPNPDYVSPFDPLDADGDHDN 187

Query: 121 AAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRN 180
           AAA  VGG   DDGG+FASDGPVLPDPSEMREEG ARREWRRQNAIDLE+KEKKEKEMRN
Sbjct: 188 AAAAGVGG--IDDGGIFASDGPVLPDPSEMREEGYARREWRRQNAIDLEEKEKKEKEMRN 247

Query: 181 QIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPR 240
           QIINEAEEYKASFYEKRR+NCETNKAHNREREKLY ANQE+FHKEADKH+WKAIAEIIPR
Sbjct: 248 QIINEAEEYKASFYEKRRLNCETNKAHNREREKLYLANQEKFHKEADKHFWKAIAEIIPR 307

Query: 241 EVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 300
           EVPNIEKRRGKKD + KPSI+V+QGPKPGKPTDLAR+RQILLKLKQTPPPHMMPPPPKPA
Sbjct: 308 EVPNIEKRRGKKDAENKPSIVVIQGPKPGKPTDLARMRQILLKLKQTPPPHMMPPPPKPA 367

Query: 301 KDEKDGKDGKDGEGGKDGKDSK---DGKDTKEGTENKGGKEASEGTETKDSKEEGKEVDE 360
           KD KDGKD KD + GKD KD+K   DGKD KEG E+KGGKEA EGTETKD+KEEG EV +
Sbjct: 368 KDGKDGKDAKDAKNGKDDKDAKNGKDGKDVKEGKEDKGGKEAKEGTETKDAKEEGNEVKD 427

Query: 361 KKASSP-ATVLTPTSPAINMDANGTPDQPIIEVEA 391
           KKASSP A   TP+SPA N+DANGTP QP  E+EA
Sbjct: 428 KKASSPTAPDNTPSSPAKNVDANGTPGQPKPEIEA 457

[Close]

BLAST of CsGy6G010660 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 303.9 bits (777), Expect = 2.0e-82
Identity = 197/357 (55.18%), Postives = 237/357 (66.39%), Query Frame = 0


Query: 37  DSTLPSQPYDSSTPFSPSHDISSPDH--QPQPPPSFFEDNVISDIHSPGNTTNPNLSDAY 96
           D   P+Q +      S   D    D+  + Q PP+  +    S  +  G+  +PN    Y
Sbjct: 6   DGDFPAQTHSP----SEHEDFGGYDNFSEAQQPPTQHQSGGFSSFN--GDPASPN---GY 65

Query: 97  DFGVSNPNPDYVSPFHSADADADHDNAAAPAVGGGAFDDGGLFASDGPVLPDPSEMREEG 156
            FG S+PN D+ SPF S+  DA+ +       GGG+  D  +FASDGP+LPDP+EMREEG
Sbjct: 66  GFGASSPNHDFSSPFESSVNDANGN-------GGGSGGD-AIFASDGPILPDPNEMREEG 125

Query: 157 NARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKL 216
             RREWRR N I LE+KEKKEKEMRNQII EAE++K +FYEKR    ETNK  NRE+EKL
Sbjct: 126 FQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKL 185

Query: 217 YHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPDKKPSILVVQGPKPGKPTDL 276
           Y ANQE+FHKE DKHYWKAIAE+IPREVPNIEK+RGKKDPDKKPS+ V+QGPKPGKPTDL
Sbjct: 186 YWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDL 245

Query: 277 ARLRQILLKLKQTPPPHMMPPPPKPAKDEKDGKDGKDGEGGKDGKDSKDGKDTKEGTENK 336
            R+RQI LKLK  PPPHMMPPPP PAKD KDGKD KD   GKD K  KDGKD       K
Sbjct: 246 GRMRQIFLKLKTNPPPHMMPPPP-PAKDAKDGKDAKD---GKDAKTGKDGKDA------K 305

Query: 337 GGKEASEGTETKDSKEEGKEVDEKKASSPATVLTPTSPAINMDANGTPDQPIIEVEA 392
           GGK+A    + KD K    +V E+K  SPA   +  +   +  A+G  ++P+   EA
Sbjct: 306 GGKDAK---DLKDGKPADPKVTEEKRPSPAKDASVETAKPDAAASGEGEKPVAVTEA 332

[Close]

BLAST of CsGy6G010660 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 197.6 bits (501), Expect = 2.0e-50
Identity = 119/211 (56.40%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 115 DADHDNAAAPAVGGGAFDDG-GLFAS----DGPVLPDPSEMR-EEGNARREWRRQNAIDL 174
           D+  D  AAP+   GA+ +G G+F S    DGP+LP PSEM  +EG A REWRRQNAI L
Sbjct: 43  DSVDDVFAAPSSDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQL 102

Query: 175 EDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADK 234
           E+KEK+EKE+  QII EA++YK  F++K  V CE NKA NRE+EKLY  NQE+F+ E+ K
Sbjct: 103 EEKEKREKELLKQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSK 162

Query: 235 HYWKAIAEIIPREVPNIEKRRGKKDPD--KKPSILVVQGPKPGKPTDLARLRQILLKLKQ 294
           +YWKAIAE++P+EVP IEKRRGKK+    KKP++ V+QGPKPGKPTDL R+RQIL+KLK 
Sbjct: 163 NYWKAIAELVPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKH 222

Query: 295 TPPPHM----MPPPPKPAKDEKDGKDGKDGE 314
            PP H+     PP  + A   K+  + K  E
Sbjct: 223 NPPSHLKLTSQPPSEEAAAPPKNVPETKPTE 253

[Close]

BLAST of CsGy6G010660 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-43
Identity = 109/213 (51.17%), Postives = 138/213 (64.79%), Query Frame = 0


Query: 91  SDAYDFGVSN--PNPDYVSPFHSADADADHDNAAAPAVGGGAFDDGGLFASDGPVLPDPS 150
           S  +D   SN    P+  S     D+    +  + P++   +FDD     ++  +LP PS
Sbjct: 38  SQRFDSSFSNFDSQPEKESDLPCGDSSPRPETQSPPSI--NSFDD-----TNDSILPPPS 97

Query: 151 EM-REEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETNKAH 210
            M +EEG A REWRR NA+ LE+KEK+EKEM  QI+  AE+YKA FY KR V  E NK  
Sbjct: 98  AMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTIENNKKL 157

Query: 211 NREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPDKKPSILVVQGPK 270
           NRE+EK +  NQE+F+ EADK+ WKAIAE+IPREVP IE R  KK   K  +I V+QGPK
Sbjct: 158 NREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNKK---KTATITVIQGPK 217

Query: 271 PGKPTDLARLRQILLKLKQTPPPHMMPPPPKPA 301
           PGKPTDL+R+RQ+L KLK  PP HM P  P P+
Sbjct: 218 PGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSPS 240

The following BLAST results are available for this feature:

BLAST of CsGy6G010660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU1	2.8e-81	55.18	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q5Z402	6.2e-57	50.00	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q7XKE9	5.4e-53	59.09	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]
Q6Z3A8	8.6e-51	51.39	Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 ...	[more]
O04209	2.8e-49	56.40	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]

BLAST of CsGy6G010660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656953.1	4.92e-288	100.00	clathrin light chain 1 [Cucumis sativus] >KAE8646860.1 hypothetical protein Csa_...	[more]
KAA0062081.1	1.52e-246	88.25	clathrin light chain 1 [Cucumis melo var. makuwa]	[more]
XP_008448281.1	7.18e-245	88.04	PREDICTED: clathrin light chain 1 [Cucumis melo]	[more]
TYK04938.1	3.99e-244	88.01	clathrin light chain 1 [Cucumis melo var. makuwa]	[more]
XP_038900435.1	2.39e-204	78.72	LOW QUALITY PROTEIN: clathrin light chain 1 [Benincasa hispida]	[more]

BLAST of CsGy6G010660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD26	1.33e-287	100.00	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G128590 PE=3 SV=1	[more]
A0A5A7V8R6	7.34e-247	88.25	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G...	[more]
A0A1S3BJB2	3.48e-245	88.04	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103490517 PE=3 SV=1	[more]
A0A5D3C0Z6	1.93e-244	88.01	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143...	[more]
A0A6J1CGW6	1.04e-194	77.22	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111011316 PE=3 SV=1	[more]

BLAST of CsGy6G010660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20760.1	2.0e-82	55.18	Clathrin light chain protein	[more]
AT2G40060.1	2.0e-50	56.40	Clathrin light chain protein	[more]
AT3G51890.1	3.1e-43	51.17	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 168..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..27
None	No IPR available	PANTHER	PTHR10639:SF33	CLATHRIN LIGHT CHAIN	coord: 1..358
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 144..287 e-value: 2.1E-5 score: 24.6
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 1..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G010660.2	CsGy6G010660.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0005198	structural molecule activity