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CsGy6G010600 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGAGTAGAAAAAAAGGAAAGGGAGGAAAAGGAAAGGCGATTGAAGAGAAACCAGAGCTTTAAAAGAGAGCAATGTTTTTGTCCTTTACTTCTTTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCGTCTCTTCTATATCCATTCTTTTTCCCATTTCTATTGAATTTCAGATTCCTTCGCTCTTCTCGCTTTTTATATAAACTCCCTCTCAACCCTCCACCCTCCACATCGCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCCTCTCTCAACCAACCTTTTTAACTCTCACGCAGATACTAATCCGCCGATTAAATTTTGGTACGTTTCTGTTCCCCCCTTCTGTATGACTCTTAGATGGGACTGTGTTTCTCAGTGGATTAAGCTTTAGATCTGTTTGCCAATGTATATGGGTATTTTTTTTCGTTTAGGTTTCTTCCTTTCGAGACCTCTGATGGAGATGGGGTTCTTTGTTTTTGGTTTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTGATATCGCTTCGAACTCCATCCCCTTTTTTTGTGGATGACTTTTGGGTTTCTTTGTTTTCTGAAACGGTTTTATGTGTTGTGCAGGCGGAAAACTTTCATGCTCTGTTTTTGCTCTGTTTTTTAGAGATGTTTTATGTGGTGTGAGGGTGGGGGTGGATTCTTTCGATTGTTTTATTTTTTCCAAAGATTAATACGCCAATAGAACTTTAGTCAAGTGGTGAGTTACGAAAATCTTGTGTTCTTGTTGGGTCTTTTGAATAGAAAGTTCACTTGGATTTTCCACCTCTTTGGAAAATGGAAGAGTAGTTATGTGGAGTTCTGATTTCGATTGCAACTTGGGTTTTGATTCACCTGTATATTGTTTTTGGTTATTAATTGTTGGGTTTGTGATTTTTCTTCATTTAGGAAAATTCTTAGTTATGTATTTATGCCGTTCTGGTTTCTTCTATGCATGATTATGCCTCTCGGATCTGTTTTTCAAGTAACTGATCGAATTTATGTGTGTGCCTAAAGATTGATAGTTCTTTTCACTTTTCACCTGCACTGAGTTCATCTGCTTCAAAAGATGGCTTATGAATGCAGAAGATTCTGAATCTTTACCACGTTATGCAAGAAATTGGAACTTCTAACAATTTTATTAGGATAACGTAATCTAGGGAAGTTCTTGGATGGATTGTGTCTGTGAGAGTCATAACGAATCTCCATCATTTGAATTTCTTATTGATTAAATAAATTGAATCTGGGTCTGTCAAGATCAGCATGTTTTGATATTTATGGGAACTTCAGAAATCCTTGACACCATTCTCCACTTGGGGGTTTCGTGATAGAATTTTCAAGAGGCGACCATTCAGAATAGAATAATCTATAAGCTTACCCATGTTCGTGTCAGTTCTGGGACCCAATTAATATTATATTCGAAGCAGTGGATTAGGATGATTTGTTTTGCCGTTTCATCAGTTATCTTATCACTGCAATGAATGGGATGCTTTTGGTTTATTAATGAATTCCTAGTAAATCGTGCCTTTATAGCTTCTTGTCCGAATTGTTGATTCTTTTGTCTGCTTTTTTGCATCCTTGTATTTACAAACAGCAGCCTTTTACTGTGAATTTCTATTAGACTTTAGTTCTGAGTTCTGACCTTGTTTCTTGGATATGTTTATCAGCTTGAGGCATTATAGAAAGTAGACTGTGCTGAAACATAAACCTGGCCATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTCGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCACCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGAATACATCGCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCCTTTAGACCATTTCTAGGCATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGCTACAAAATTTCCTTCAATCTGTTTCAAGGAATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGAGCAATAACGTAGGAATCTCCTAATAAGTGATCCACGAAAAGGAATGAAGATAGGGAAAGTTTGCATAATCTTTTTCTTTTCTTTATTTGTCTGGTTGATTAAAAAAATTACTAAAATCCAATTTTGTGGTTATCCAAACTTGATTCATTTCAATATAAAATTAGGTGAATGGAAGAGGGCATCTTCATGCACCCAAACAAGTCTTTCTCCAAAGGAACAAATTTCTTCCGTGAATGGCACGACTTCAATAAATAAGCAACCCGTAATGTTTGCATTAGTACTTGAATAGATCGAACTGACTCGAATCCAAGTGAGCCTATTTGTTT ACGAGTAGAAAAAAAGGAAAGGGAGGAAAAGGAAAGGCGATTGAAGAGAAACCAGAGCTTTAAAAGAGAGCAATGTTTTTGTCCTTTACTTCTTTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCGTCTCTTCTATATCCATTCTTTTTCCCATTTCTATTGAATTTCAGATTCCTTCGCTCTTCTCGCTTTTTATATAAACTCCCTCTCAACCCTCCACCCTCCACATCGCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCCTCTCTCAACCAACCTTTTTAACTCTCACGCAGATACTAATCCGCCGATTAAATTTTGGCGGAAAACTTTCATGCTCTGTTTTTGCTCTGTTTTTTAGAGATGTTTTATGTGGTGTGAGGGTGGGGGTGGATTCTTTCGATTGTTTTATTTTTTCCAAAGATTAATACGCCAATAGAACTTTAGTCAAGTGCTTGAGGCATTATAGAAAGTAGACTGTGCTGAAACATAAACCTGGCCATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTCGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCACCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGAATACATCGCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCCTTTAGACCATTTCTAGGCATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGCTACAAAATTTCCTTCAATCTGTTTCAAGGAATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGAGCAATAACGTAGGAATCTCCTAATAAGTGATCCACGAAAAGGAATGAAGATAGGGAAAGTTTGCATAATCTTTTTCTTTTCTTTATTTGTCTGGTTGATTAAAAAAATTACTAAAATCCAATTTTGTGGTTATCCAAACTTGATTCATTTCAATATAAAATTAGGTGAATGGAAGAGGGCATCTTCATGCACCCAAACAAGTCTTTCTCCAAAGGAACAAATTTCTTCCGTGAATGGCACGACTTCAATAAATAAGCAACCCGTAATGTTTGCATTAGTACTTGAATAGATCGAACTGACTCGAATCCAAGTGAGCCTATTTGTTT ATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTCGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCACCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGAATACATCGCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAA MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPTTQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF* Homology
BLAST of CsGy6G010600 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.0e-55 Identity = 119/257 (46.30%), Postives = 159/257 (61.87%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.6e-42 Identity = 96/221 (43.44%), Postives = 136/221 (61.54%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.3e-35 Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30 Identity = 84/218 (38.53%), Postives = 111/218 (50.92%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.7e-15 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of CsGy6G010600 vs. NCBI nr
Match: XP_004139942.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KGN46743.1 hypothetical protein Csa_020992 [Cucumis sativus]) HSP 1 Score: 513 bits (1320), Expect = 2.21e-183 Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of CsGy6G010600 vs. NCBI nr
Match: XP_008448288.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_016900554.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo]) HSP 1 Score: 478 bits (1231), Expect = 8.19e-170 Identity = 234/252 (92.86%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of CsGy6G010600 vs. NCBI nr
Match: XP_038901529.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]) HSP 1 Score: 419 bits (1078), Expect = 1.70e-146 Identity = 210/253 (83.00%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of CsGy6G010600 vs. NCBI nr
Match: KAA0062066.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa]) HSP 1 Score: 417 bits (1073), Expect = 9.45e-146 Identity = 202/220 (91.82%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of CsGy6G010600 vs. NCBI nr
Match: XP_022140292.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]) HSP 1 Score: 363 bits (933), Expect = 2.04e-124 Identity = 185/254 (72.83%), Postives = 210/254 (82.68%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy TrEMBL
Match: A0A0A0KB39 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 PE=4 SV=1) HSP 1 Score: 513 bits (1320), Expect = 1.07e-183 Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy TrEMBL
Match: A0A1S3BJB6 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 SV=1) HSP 1 Score: 478 bits (1231), Expect = 3.97e-170 Identity = 234/252 (92.86%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy TrEMBL
Match: A0A5A7V6F7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001700 PE=4 SV=1) HSP 1 Score: 417 bits (1073), Expect = 4.58e-146 Identity = 202/220 (91.82%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy TrEMBL
Match: A0A6J1CHP4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111010997 PE=4 SV=1) HSP 1 Score: 363 bits (933), Expect = 9.87e-125 Identity = 185/254 (72.83%), Postives = 210/254 (82.68%), Query Frame = 0
BLAST of CsGy6G010600 vs. ExPASy TrEMBL
Match: A0A6J1FXR1 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111448157 PE=4 SV=1) HSP 1 Score: 348 bits (893), Expect = 4.07e-119 Identity = 174/228 (76.32%), Postives = 194/228 (85.09%), Query Frame = 0
BLAST of CsGy6G010600 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 ) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-43 Identity = 96/221 (43.44%), Postives = 136/221 (61.54%), Query Frame = 0
BLAST of CsGy6G010600 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 ) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-43 Identity = 96/221 (43.44%), Postives = 136/221 (61.54%), Query Frame = 0
BLAST of CsGy6G010600 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 ) HSP 1 Score: 149.4 bits (376), Expect = 3.8e-36 Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 0
BLAST of CsGy6G010600 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 ) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31 Identity = 84/218 (38.53%), Postives = 111/218 (50.92%), Query Frame = 0
BLAST of CsGy6G010600 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 4.8e-23 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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