CsGy6G010140 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGACATTTTCGATTCTTCCCTCAATCTTGAAGAGGCCCACTTGAAGGAAGGTTATGCCGACGGCTATAAAGATGGTCTCGTCGCTGGCAAAGAAGAGGCTGAGCAAGTAGGCCTTAAAGTTGGTTTCGAGGTCGGCGAGGAACTAGGGTTCTACAGAGGGTGTGTGGACGTGTGGAATTCTGTAATTCGGATCGAACCGGAACGGTTTTCTATTCGGGTTCGAAAGAGTGTGAAGCTGATGGAGGAGTTGCTAGAGAAATATCCACTTCAAGATCCTGAGAATGAGCAAGTTCAGGAGCTGATGGAAGGGTTGAGGCTCAAATTCAGAGCGGTTTCTGCCACTTTGGGCGTCAAATTGGAGTATCATGGCTATCCTAAATCGATTTCAGATGGAAAGGATATCGAGTTTTGA ATGGACGACATTTTCGATTCTTCCCTCAATCTTGAAGAGGCCCACTTGAAGGAAGGTTATGCCGACGGCTATAAAGATGGTCTCGTCGCTGGCAAAGAAGAGGCTGAGCAAGTAGGCCTTAAAGTTGGTTTCGAGGTCGGCGAGGAACTAGGGTTCTACAGAGGGTGTGTGGACGTGTGGAATTCTGTAATTCGGATCGAACCGGAACGGTTTTCTATTCGGGTTCGAAAGAGTGTGAAGCTGATGGAGGAGTTGCTAGAGAAATATCCACTTCAAGATCCTGAGAATGAGCAAGTTCAGGAGCTGATGGAAGGGTTGAGGCTCAAATTCAGAGCGGTTTCTGCCACTTTGGGCGTCAAATTGGAGTATCATGGCTATCCTAAATCGATTTCAGATGGAAAGGATATCGAGTTTTGA ATGGACGACATTTTCGATTCTTCCCTCAATCTTGAAGAGGCCCACTTGAAGGAAGGTTATGCCGACGGCTATAAAGATGGTCTCGTCGCTGGCAAAGAAGAGGCTGAGCAAGTAGGCCTTAAAGTTGGTTTCGAGGTCGGCGAGGAACTAGGGTTCTACAGAGGGTGTGTGGACGTGTGGAATTCTGTAATTCGGATCGAACCGGAACGGTTTTCTATTCGGGTTCGAAAGAGTGTGAAGCTGATGGAGGAGTTGCTAGAGAAATATCCACTTCAAGATCCTGAGAATGAGCAAGTTCAGGAGCTGATGGAAGGGTTGAGGCTCAAATTCAGAGCGGTTTCTGCCACTTTGGGCGTCAAATTGGAGTATCATGGCTATCCTAAATCGATTTCAGATGGAAAGGATATCGAGTTTTGA MDDIFDSSLNLEEAHLKEGYADGYKDGLVAGKEEAEQVGLKVGFEVGEELGFYRGCVDVWNSVIRIEPERFSIRVRKSVKLMEELLEKYPLQDPENEQVQELMEGLRLKFRAVSATLGVKLEYHGYPKSISDGKDIEF* Homology
BLAST of CsGy6G010140 vs. ExPASy Swiss-Prot
Match: Q8CH62 (Protein LTO1 homolog OS=Mus musculus OX=10090 GN=Lto1 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy Swiss-Prot
Match: Q75JW3 (Protein LTO1 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272178 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10 Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy Swiss-Prot
Match: Q8WV07 (Protein LTO1 homolog OS=Homo sapiens OX=9606 GN=LTO1 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10 Identity = 37/136 (27.21%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of CsGy6G010140 vs. NCBI nr
Match: KAA0047887.1 (formimidoyltransferase-cyclodeaminase isoform X2 [Cucumis melo var. makuwa] >TYK02166.1 formimidoyltransferase-cyclodeaminase isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 264 bits (674), Expect = 1.19e-88 Identity = 128/138 (92.75%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of CsGy6G010140 vs. NCBI nr
Match: XP_038902357.1 (formimidoyltransferase-cyclodeaminase-like [Benincasa hispida]) HSP 1 Score: 261 bits (668), Expect = 1.61e-83 Identity = 130/138 (94.20%), Postives = 134/138 (97.10%), Query Frame = 0
BLAST of CsGy6G010140 vs. NCBI nr
Match: XP_022970845.1 (oral cancer-overexpressed protein 1 homolog [Cucurbita maxima]) HSP 1 Score: 238 bits (607), Expect = 1.89e-78 Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of CsGy6G010140 vs. NCBI nr
Match: XP_022947461.1 (oral cancer-overexpressed protein 1 homolog [Cucurbita moschata]) HSP 1 Score: 237 bits (604), Expect = 5.42e-78 Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0
BLAST of CsGy6G010140 vs. NCBI nr
Match: XP_004139960.1 (formimidoyltransferase-cyclodeaminase isoform X2 [Cucumis sativus]) HSP 1 Score: 246 bits (628), Expect = 1.07e-77 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy TrEMBL
Match: A0A0A0KE52 (Yae1_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G124070 PE=4 SV=1) HSP 1 Score: 276 bits (705), Expect = 1.07e-93 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy TrEMBL
Match: A0A5D3BVB4 (Formimidoyltransferase-cyclodeaminase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00590 PE=4 SV=1) HSP 1 Score: 264 bits (674), Expect = 5.74e-89 Identity = 128/138 (92.75%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy TrEMBL
Match: A0A6J1I414 (oral cancer-overexpressed protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469699 PE=4 SV=1) HSP 1 Score: 238 bits (607), Expect = 9.15e-79 Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy TrEMBL
Match: A0A6J1G6H8 (oral cancer-overexpressed protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451317 PE=4 SV=1) HSP 1 Score: 237 bits (604), Expect = 2.62e-78 Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0
BLAST of CsGy6G010140 vs. ExPASy TrEMBL
Match: A0A1S3BJ53 (formimidoyltransferase-cyclodeaminase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490466 PE=4 SV=1) HSP 1 Score: 238 bits (606), Expect = 1.06e-74 Identity = 117/124 (94.35%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of CsGy6G010140 vs. TAIR 10
Match: AT2G20830.2 (transferases;folic acid binding ) HSP 1 Score: 121.7 bits (304), Expect = 4.6e-28 Identity = 55/117 (47.01%), Postives = 83/117 (70.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|