CsGy6G009330 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G009330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Nuclear transcription factor Y subunit B-3
Location	Gy14Chr6: 7797477 .. 7798172 (+)
RNA-Seq Expression	CsGy6G009330
Synteny	CsGy6G009330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACACTTCCTTTGAGAAAACCATCATCATGGTGTATTGTTCTAACTTTTTTTCTCCTCTGTTTGGGTTTTTGGGGGTTTAGGTTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCCATGCTTTATTTCTCAATCTCCAAAAGGAACTCACTACCTATTCGGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGAAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCATCGGTTCAATAAAACCAGAAACCCGCACCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACTGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGACATATCGTTTCGTTACCAGAAACTGACGGATTTTCAAAGGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAAAATTTGATCGAAATCGACATATCAATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

mRNA sequence

ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACACTTCCTTTGAGAAAACCATCATCATGGTGTATTGTTCTAACTTTTTTTCTCCTCTGTTTGGGTTTTTGGGGGTTTAGGTTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCCATGCTTTATTTCTCAATCTCCAAAAGGAACTCACTACCTATTCGGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGAAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCATCGGTTCAATAAAACCAGAAACCCGCACCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACTGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGACATATCGTTTCGTTACCAGAAACTGACGGATTTTCAAAGGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAAAATTTGATCGAAATCGACATATCAATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

Coding sequence (CDS)

ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACACTTCCTTTGAGAAAACCATCATCATGGTGTATTGTTCTAACTTTTTTTCTCCTCTGTTTGGGTTTTTGGGGGTTTAGGTTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCCATGCTTTATTTCTCAATCTCCAAAAGGAACTCACTACCTATTCGGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGAAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCATCGGTTCAATAAAACCAGAAACCCGCACCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACTGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGACATATCGTTTCGTTACCAGAAACTGACGGATTTTCAAAGGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAAAATTTGATCGAAATCGACATATCAATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

Protein sequence

MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA*

Homology

[Close]

BLAST of CsGy6G009330 vs. NCBI nr
Match: XP_011656887.2 (uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetical protein Csa_005290 [Cucumis sativus])

HSP 1 Score: 442 bits (1137), Expect = 3.49e-156
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60
           MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFT 120
           ISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFT
Sbjct: 61  ISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFT 120

Query: 121 TTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDD 180
           TTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDD
Sbjct: 121 TTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDD 180

Query: 181 ISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
           ISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 181 ISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231

[Close]

BLAST of CsGy6G009330 vs. NCBI nr
Match: XP_008464163.1 (PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo])

HSP 1 Score: 392 bits (1006), Expect = 3.34e-136
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60
           MKLKIKVENQMANT PLRKP SW +VLTFFL CLGF GFRFFSSFLFTSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFT 120
           ISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFT
Sbjct: 61  ISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFT 120

Query: 121 TTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED- 180
           TTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED 
Sbjct: 121 TTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDE 180

Query: 181 -DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
            D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 181 DDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 232

[Close]

BLAST of CsGy6G009330 vs. NCBI nr
Match: XP_038902685.1 (uncharacterized protein LOC120089322 [Benincasa hispida])

HSP 1 Score: 360 bits (923), Expect = 1.03e-123
Identity = 195/222 (87.84%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 11  MANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIR 70
           MA TLPLR P SW I LTFFLLCLGF GFR FSSFL TSIALIMSMLYFSISKRNSLPI+
Sbjct: 1   MATTLPLRTPLSWFIALTFFLLCLGFLGFRSFSSFLLTSIALIMSMLYFSISKRNSLPIQ 60

Query: 71  KFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWP 130
           KFVQ+ +EEEEEEDQK+LTFFSDHLKSSS SAPT  DLLSESECADDNFTTTEESEVEWP
Sbjct: 61  KFVQQVQEEEEEEDQKKLTFFSDHLKSSSVSAPTTGDLLSESECADDNFTTTEESEVEWP 120

Query: 131 YFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVD-EDEDDISFRYQKLT 190
           YFDHR  K  NP RSDDGSISDEESLIEIALPTGHYVS KFDDVD EDED +SFRYQKL+
Sbjct: 121 YFDHRSYKPNNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDEDEDGMSFRYQKLS 180

Query: 191 DFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
           DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 181 DFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 222

[Close]

BLAST of CsGy6G009330 vs. NCBI nr
Match: KAA0060802.1 (uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (789), Expect = 7.45e-104
Identity = 166/186 (89.25%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 54  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIED 113
           MSMLYFSISKR+SLPI+KFVQE      EEEEEEEEDQK+LTFFSDHLKSSSASAPT  D
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRD 60

Query: 114 LLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYV 173
           LLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYV
Sbjct: 61  LLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYV 120

Query: 174 SRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS 231
           SRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Sbjct: 121 SRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYS 180

[Close]

BLAST of CsGy6G009330 vs. NCBI nr
Match: TYK11971.1 (uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (787), Expect = 1.18e-103
Identity = 164/180 (91.11%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 54  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESE 113
           MSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESE
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESE 60

Query: 114 CADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 173
           CADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDD
Sbjct: 61  CADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 120

Query: 174 VDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
           VDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 121 VDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 179

[Close]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL
Match: A0A1S3CMD0 (uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 1.62e-136
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60
           MKLKIKVENQMANT PLRKP SW +VLTFFL CLGF GFRFFSSFLFTSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFT 120
           ISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFT
Sbjct: 61  ISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFT 120

Query: 121 TTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED- 180
           TTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED 
Sbjct: 121 TTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDE 180

Query: 181 -DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
            D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 181 DDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 232

[Close]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL
Match: A0A0A0KCP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112470 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 1.26e-113
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 54  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESE 113
           MSMLYFSISKRNSLPIRKFVQEEEEEE   DQKQLTFFSDHLKSSSASAPTIEDLLSESE
Sbjct: 1   MSMLYFSISKRNSLPIRKFVQEEEEEE---DQKQLTFFSDHLKSSSASAPTIEDLLSESE 60

Query: 114 CADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 173
           CADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD
Sbjct: 61  CADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 120

Query: 174 VDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
           VDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 121 VDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 175

[Close]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL
Match: A0A5A7UY43 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00220 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 3.60e-104
Identity = 166/186 (89.25%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 54  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIED 113
           MSMLYFSISKR+SLPI+KFVQE      EEEEEEEEDQK+LTFFSDHLKSSSASAPT  D
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRD 60

Query: 114 LLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYV 173
           LLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYV
Sbjct: 61  LLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYV 120

Query: 174 SRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS 231
           SRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Sbjct: 121 SRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYS 180

[Close]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL
Match: A0A5D3CJH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001550 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 5.70e-104
Identity = 164/180 (91.11%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 54  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESE 113
           MSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESE
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESE 60

Query: 114 CADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 173
           CADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDD
Sbjct: 61  CADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 120

Query: 174 VDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
           VDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 121 VDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 179

[Close]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL
Match: A0A6J1CG35 (uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011203 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 8.44e-92
Identity = 176/240 (73.33%), Postives = 189/240 (78.75%), Query Frame = 0


Query: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60
           MKLKI+VE+QMA T PLR P SW  V +F LLCLGF G RF S+F  TS  LIMSMLYF+
Sbjct: 1   MKLKIRVEDQMA-TPPLRNPLSWFSVFSFLLLCLGFLGLRFSSNFPLTSTILIMSMLYFA 60

Query: 61  ISKRNSLPI------RKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESEC 120
           ISKRNSLPI       KFV+EEEEE E E    ++F SD  K SSASAPT  DLLSESEC
Sbjct: 61  ISKRNSLPIPIPIPIEKFVEEEEEEAEAE----VSFDSDQ-KFSSASAPT-GDLLSESEC 120

Query: 121 ADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD- 180
           ADDNFTTTEESEVEWP+ D       NP RS DGSISDEESLIEIALPTGHYVS KFDD 
Sbjct: 121 ADDNFTTTEESEVEWPFSDRT--TAHNPDRS-DGSISDEESLIEIALPTGHYVSHKFDDD 180

Query: 181 -VDEDEDDISFRYQKLTDFQR-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 231
             DEDEDD+SF  QKL+DFQ+ KNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 181 EEDEDEDDMSFHLQKLSDFQKQKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 230

[Close]

BLAST of CsGy6G009330 vs. TAIR 10
Match: AT2G04480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits to 38 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 7.5e-15
Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = 0


Query: 17  LRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEE 76
           L++P SW  +L   LL +   G RF    L T  AL  S  +F IS  +S      +Q  
Sbjct: 86  LKRPFSWVSLLAPPLLHI--LGIRFL-HLLLTCTALFFSSFFFPISLPHS-----SIQSS 145

Query: 77  EEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRF 136
           ++++++E     T                +D+  +SE   +N   T E +          
Sbjct: 146 KQDQDQEGHYIAT----------------KDITGKSE---ENLEKTNEED---------- 205

Query: 137 NKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNL 196
                    DDG+I D+ESLIE++LP+GHY+   ++       +  + + K+ DF+   L
Sbjct: 206 ---------DDGAIPDDESLIELSLPSGHYLGHHYN----SNKNHLYIHNKVQDFR---L 247

Query: 197 VEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 232
            ++L EIND  EE+NLIEIDIS+GSIKYSRFEI+A
Sbjct: 266 FDLLNEINDFTEEDNLIEIDISIGSIKYSRFEIKA 247

[Close]

BLAST of CsGy6G009330 vs. TAIR 10
Match: AT5G35870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 15  LPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQ 74
           L  ++P SW   L   LL +   G   FS  + TS AL  S  +F +S          +Q
Sbjct: 38  LRFKRPVSWLSFLAPPLLHIIGLG---FSQIILTSAALFFSSFFFPLS----------IQ 97

Query: 75  EEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDH 134
           +   + ++  Q+      D+L  +  S+ T  D++  ++                     
Sbjct: 98  KPNSKVQDLSQQ------DYLGETELSSTTTNDIVKNND--------------------- 157

Query: 135 RFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRK 194
                      DDG+I DEESLIE++LP+GHY+   +  +   +D     Y  + DF+  
Sbjct: 158 ----------EDDGTIPDEESLIELSLPSGHYIGHHYSTMIGKQDQ-KIMYNNIPDFR-- 196

Query: 195 NLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 232
            L+++ AE     E++NLIEIDIS+GSIK SRF+I+A
Sbjct: 218 -LIQLSAEY----EDDNLIEIDISIGSIKCSRFQIKA 196

The following BLAST results are available for this feature:

BLAST of CsGy6G009330 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G009330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656887.2	3.49e-156	100.00	uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetica...	[more]
XP_008464163.1	3.34e-136	90.56	PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]	[more]
XP_038902685.1	1.03e-123	87.84	uncharacterized protein LOC120089322 [Benincasa hispida]	[more]
KAA0060802.1	7.45e-104	89.25	uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]	[more]
TYK11971.1	1.18e-103	91.11	uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy6G009330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMD0	1.62e-136	90.56	uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=...	[more]
A0A0A0KCP7	1.26e-113	98.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112470 PE=4 SV=1	[more]
A0A5A7UY43	3.60e-104	89.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CJH9	5.70e-104	91.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CG35	8.44e-92	73.33	uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of CsGy6G009330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04480.1	7.5e-15	33.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35870.1	3.9e-11	29.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35708:SF3	GB\|AAD25831.1	coord: 15..231
None	No IPR available	PANTHER	PTHR35708	GB\|AAD25831.1	coord: 15..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G009330.2	CsGy6G009330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane