
CsGy6G009300 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTAGTGATTGAAATGTCACCACAAATGAAAAGGAAAGACGAAGATGGGGCCTTTGGGCTTGGCTGTTATATCAAGCATTGGCCATTGGCTTAGATGAGCAAATATCATTGCCACAACATTCATATCCAAATCTCTTGTGTGGATTTAGGTGAAACAGCTTCAAGAATACTTCATATCCAAATCTCTTTGTGCCATCCCCAACAAACACAGCATTCACTAATTCAACAATGGCCGCCAAATTTCCTCTTTCTTCTTCCCTTACCATCAAATTTCCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTAAGAAAAGAGCTTTCACTTTTGCTTGGATCTGCAACTCATTCTTGCTGTGTTTTTTTATATTTATATTGATGCCTTCTTTTTACAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTAAACAATTTTTTTCCTTTTATGTTTTCCTTTTTCTGGTATCAGAATGTTCAACAATTTGAGTGGAAATACAAGAAGATAATTGTAAAATACCAAGCTGAAAATCTGATTGGATTTGATGGTGTAGGTATTGGCAGACAGCAGGGGAAAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGAATCTGTACAAACTCATTGTGCAAAGGCAAATGCCAAGTGAACATCACCATGACAGTAACCTGAGAGTAACCTGAGATCTCCTTCCACAGCGCACAAAACCCTCTGTTTATGCCTGTTTTGAGTTGTTATGTTATTTCAGAAATTAATACGAAGTATAGTAACTTAATTAATTTTCGCTGTTTTGAGTGCTTGGATTCCTTTTCCCTCCATTTCAATACAAGTATTTGTTGTTGGTAGCTTTGAGTAATA TGTAGTGATTGAAATGTCACCACAAATGAAAAGGAAAGACGAAGATGGGGCCTTTGGGCTTGGCTGTTATATCAAGCATTGGCCATTGGCTTAGATGAGCAAATATCATTGCCACAACATTCATATCCAAATCTCTTGTGTGGATTTAGGTGAAACAGCTTCAAGAATACTTCATATCCAAATCTCTTTGTGCCATCCCCAACAAACACAGCATTCACTAATTCAACAATGGCCGCCAAATTTCCTCTTTCTTCTTCCCTTACCATCAAATTTCCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTATTGGCAGACAGCAGGGGAAAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGAATCTGTACAAACTCATTGTGCAAAGGCAAATGCCAAGTGAACATCACCATGACAGTAACCTGAGAGTAACCTGAGATCTCCTTCCACAGCGCACAAAACCCTCTGTTTATGCCTGTTTTGAGTTGTTATGTTATTTCAGAAATTAATACGAAGTATAGTAACTTAATTAATTTTCGCTGTTTTGAGTGCTTGGATTCCTTTTCCCTCCATTTCAATACAAGTATTTGTTGTTGGTAGCTTTGAGTAATA ATGGCCGCCAAATTTCCTCTTTCTTCTTCCCTTACCATCAAATTTCCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTATTGGCAGACAGCAGGGGAAAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGA MAAKFPLSSSLTIKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR* Homology
BLAST of CsGy6G009300 vs. NCBI nr
Match: XP_004140001.1 (uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical protein Csa_005653 [Cucumis sativus]) HSP 1 Score: 247 bits (631), Expect = 1.40e-82 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. NCBI nr
Match: XP_008464165.1 (PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo] >KAA0060798.1 uncharacterized protein E6C27_scaffold137G00170 [Cucumis melo var. makuwa] >TYK11961.1 uncharacterized protein E5676_scaffold177G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 247 bits (630), Expect = 8.72e-82 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. NCBI nr
Match: XP_038902667.1 (uncharacterized protein LOC120089303 [Benincasa hispida]) HSP 1 Score: 214 bits (546), Expect = 1.21e-69 Identity = 112/123 (91.06%), Postives = 113/123 (91.87%), Query Frame = 0
BLAST of CsGy6G009300 vs. NCBI nr
Match: XP_022971133.1 (uncharacterized protein LOC111469898 [Cucurbita maxima]) HSP 1 Score: 206 bits (523), Expect = 4.15e-66 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. NCBI nr
Match: XP_022140463.1 (uncharacterized protein LOC111011130 [Momordica charantia]) HSP 1 Score: 206 bits (523), Expect = 4.29e-66 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. ExPASy TrEMBL
Match: A0A0A0KA68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1) HSP 1 Score: 247 bits (631), Expect = 6.79e-83 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. ExPASy TrEMBL
Match: A0A5D3CJG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001450 PE=4 SV=1) HSP 1 Score: 247 bits (630), Expect = 4.22e-82 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. ExPASy TrEMBL
Match: A0A1S3CKW7 (uncharacterized protein LOC103502113 OS=Cucumis melo OX=3656 GN=LOC103502113 PE=4 SV=1) HSP 1 Score: 247 bits (630), Expect = 4.22e-82 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. ExPASy TrEMBL
Match: A0A6J1I5Y3 (uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898 PE=4 SV=1) HSP 1 Score: 206 bits (523), Expect = 2.01e-66 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. ExPASy TrEMBL
Match: A0A6J1CI22 (uncharacterized protein LOC111011130 OS=Momordica charantia OX=3673 GN=LOC111011130 PE=4 SV=1) HSP 1 Score: 206 bits (523), Expect = 2.08e-66 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CsGy6G009300 vs. TAIR 10
Match: AT4G13500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 147.9 bits (372), Expect = 5.4e-36 Identity = 85/134 (63.43%), Postives = 92/134 (68.66%), Query Frame = 0
BLAST of CsGy6G009300 vs. TAIR 10
Match: AT2G05310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 141.0 bits (354), Expect = 6.6e-34 Identity = 80/127 (62.99%), Postives = 88/127 (69.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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