CsGy6G009217 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G009217
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 7670756 .. 7671000 (+)
RNA-Seq ExpressionCsGy6G009217
SyntenyCsGy6G009217
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGGTGTGTGGTCCATGATTTTCATTATCTATAATTATTATGATAATCAGAAACGTATGCGACGCTCCTGGACACGTGCTGCACATGCACCTTCATTCTTGCCAATTAATAGTTGTCCGGGGTGGCCGTCCGATCACTCACCGGCCGCCACCGACCCTTTACATCTTCTCACTCCCCGGAATCCTTATCCTACGCTTCATATTCCTCACTTTATTATCCACTCACCACTGTGGTTATAA

mRNA sequence

ATGGATGTGAAACGTATGCGACGCTCCTGGACACGTGCTGCACATGCACCTTCATTCTTGCCAATTAATAGTTGTCCGGGGTGGCCGTCCGATCACTCACCGGCCGCCACCGACCCTTTACATCTTCTCACTCCCCGGAATCCTTATCCTACGCTTCATATTCCTCACTTTATTATCCACTCACCACTGTGGTTATAA

Coding sequence (CDS)

ATGGATGTGAAACGTATGCGACGCTCCTGGACACGTGCTGCACATGCACCTTCATTCTTGCCAATTAATAGTTGTCCGGGGTGGCCGTCCGATCACTCACCGGCCGCCACCGACCCTTTACATCTTCTCACTCCCCGGAATCCTTATCCTACGCTTCATATTCCTCACTTTATTATCCACTCACCACTGTGGTTATAA

Protein sequence

MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIHSPLWL*
Homology
[Close]
BLAST of CsGy6G009217 vs. NCBI nr
Match: KGN46597.1 (hypothetical protein Csa_005640 [Cucumis sativus])

HSP 1 Score: 147 bits (371), Expect = 9.88e-45
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH 60
          MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH
Sbjct: 1  MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH 60

Query: 61 SPLWL 65
          SPLWL
Sbjct: 61 SPLWL 65

[Close]
BLAST of CsGy6G009217 vs. ExPASy TrEMBL
Match: A0A0A0KDX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111380 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 4.78e-45
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH 60
          MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH
Sbjct: 1  MDVKRMRRSWTRAAHAPSFLPINSCPGWPSDHSPAATDPLHLLTPRNPYPTLHIPHFIIH 60

Query: 61 SPLWL 65
          SPLWL
Sbjct: 61 SPLWL 65

The following BLAST results are available for this feature:
BLAST of CsGy6G009217 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G009217 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46597.19.88e-45100.00hypothetical protein Csa_005640 [Cucumis sativus][more]
BLAST of CsGy6G009217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDX94.78e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111380 PE=4 SV=1[more]
BLAST of CsGy6G009217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G009217.1CsGy6G009217.1mRNA