CsGy6G008995 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G008995
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Seed nucellus-specific protein
Location	Gy14Chr6: 7446571 .. 7446924 (-)
RNA-Seq Expression	CsGy6G008995
Synteny	CsGy6G008995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGACAACTGGGAAGAATCTCGTTGCTGTGCTCGCATTCTCGACATTGGCAATGATGTTTATGGAAAATGTTGAAGGAGAAAGAAAGATGGGGTTGAAGGAAGCAACAAAAGCTTACAATGGTCAAGTTTTGAATGAAAAGATGGAGTACAACCCTAACGAGGACGAATATGATTGTGATGGATACAAATATAAAGACAAAGATTGTTATGATTATGGTAATTGTGACAAATCCCCGTATGATCATTCTGACGATGATGATGGTCAATACAATTGGAATTCGTACAAAAACCCAGTGCCAAAGCCAAAAGAGGTGGACGAAAAGTATAAAGTTCACAAGAATTTTCCCTAA

mRNA sequence

ATGATGACAACTGGGAAGAATCTCGTTGCTGTGCTCGCATTCTCGACATTGGCAATGATGTTTATGGAAAATGTTGAAGGAGAAAGAAAGATGGGGTTGAAGGAAGCAACAAAAGCTTACAATGGTCAAGTTTTGAATGAAAAGATGGAGTACAACCCTAACGAGGACGAATATGATTGTGATGGATACAAATATAAAGACAAAGATTGTTATGATTATGGTAATTGTGACAAATCCCCGTATGATCATTCTGACGATGATGATGGTCAATACAATTGGAATTCGTACAAAAACCCAGTGCCAAAGCCAAAAGAGGTGGACGAAAAGTATAAAGTTCACAAGAATTTTCCCTAA

Coding sequence (CDS)

ATGATGACAACTGGGAAGAATCTCGTTGCTGTGCTCGCATTCTCGACATTGGCAATGATGTTTATGGAAAATGTTGAAGGAGAAAGAAAGATGGGGTTGAAGGAAGCAACAAAAGCTTACAATGGTCAAGTTTTGAATGAAAAGATGGAGTACAACCCTAACGAGGACGAATATGATTGTGATGGATACAAATATAAAGACAAAGATTGTTATGATTATGGTAATTGTGACAAATCCCCGTATGATCATTCTGACGATGATGATGGTCAATACAATTGGAATTCGTACAAAAACCCAGTGCCAAAGCCAAAAGAGGTGGACGAAAAGTATAAAGTTCACAAGAATTTTCCCTAA

Protein sequence

MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP*

Homology

[Close]

BLAST of CsGy6G008995 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 1.23e-80
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60
           MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117
           DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of CsGy6G008995 vs. NCBI nr
Match: TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 3.96e-49
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60
           MM  GKNLVAVLA STL MMFMENVEG R+MGLKEATKAYNG V NE ++Y P E++  C
Sbjct: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEED-GC 60

Query: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYK 111
           DGYKYKDKDCY+YGNC KSPY   D DDGQYNWNS+  PVPKPKE+DEKYK
Sbjct: 61  DGYKYKDKDCYEYGNCGKSPY--PDYDDGQYNWNSHMKPVPKPKEMDEKYK 108

[Close]

BLAST of CsGy6G008995 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 135 bits (341), Expect = 1.39e-38
Identity = 74/118 (62.71%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNEDEYD 60
           M   GK LVA+L  S +AM  +ENVEG R+MGLKEAT      VLNEK E Y P ED Y+
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKED-YE 60

Query: 61  CDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117
           CDGYKYKDK+CY+YGNCDKSPY+  ++DD QYN + YK P+PKPKE+  KY VH NFP
Sbjct: 61  CDGYKYKDKNCYEYGNCDKSPYN-EEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of CsGy6G008995 vs. NCBI nr
Match: KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (304), Expect = 7.27e-33
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNED---- 61
           MT  K L+A+L  S +AM  +ENVEG R+M  K+ T     Q L++  E Y P ED    
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 62  ----EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKV 117
               +Y+CDGYKYKDKDCY+YGNCDKSPY  ++D D QYNW  YK P+ KPKE+ EKY V
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPY--NEDVDHQYNWGPYKKPITKPKEMGEKYGV 120

[Close]

BLAST of CsGy6G008995 vs. NCBI nr
Match: KAE8650853.1 (hypothetical protein Csa_001704, partial [Cucumis sativus])

HSP 1 Score: 106 bits (264), Expect = 8.57e-27
Identity = 62/123 (50.41%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61
           MT  K LVA+L  S +AM F+ENVEG R+M LK+ T     Q L+E  E          Y
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 106
            P ED        +Y+CDGYKY DKDCY+YGNCDKSPY  ++D D QYNW   K P+ KP
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPY--NEDIDHQYNWGPNKKPIAKP 120

[Close]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL
Match: A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 5.94e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60
           MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117
           DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL
Match: A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.92e-49
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60
           MM  GKNLVAVLA STL MMFMENVEG R+MGLKEATKAYNG V NE ++Y P E++  C
Sbjct: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEED-GC 60

Query: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYK 111
           DGYKYKDKDCY+YGNC KSPY   D DDGQYNWNS+  PVPKPKE+DEKYK
Sbjct: 61  DGYKYKDKDCYEYGNCGKSPY--PDYDDGQYNWNSHMKPVPKPKEMDEKYK 108

[Close]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL
Match: O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 6.75e-39
Identity = 74/118 (62.71%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNEDEYD 60
           M   GK LVA+L  S +AM  +ENVEG R+MGLKEAT      VLNEK E Y P ED Y+
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKED-YE 60

Query: 61  CDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117
           CDGYKYKDK+CY+YGNCDKSPY+  ++DD QYN + YK P+PKPKE+  KY VH NFP
Sbjct: 61  CDGYKYKDKNCYEYGNCDKSPYN-EEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL
Match: A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 3.52e-33
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNED---- 61
           MT  K L+A+L  S +AM  +ENVEG R+M  K+ T     Q L++  E Y P ED    
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 62  ----EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKV 117
               +Y+CDGYKYKDKDCY+YGNCDKSPY  ++D D QYNW  YK P+ KPKE+ EKY V
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPY--NEDVDHQYNWGPYKKPITKPKEMGEKYGV 120

[Close]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL
Match: A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 116 bits (291), Expect = 4.31e-31
Identity = 66/134 (49.25%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61
           MT  K LVA+L  S +AM F+ENVEG R+M LK+ T     Q L+E  E          Y
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 117
            P ED        +Y+CDGYKY DKDCY+YGNCDKSPY  ++D D QYNW   K P+ KP
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPY--NEDIDHQYNWGPNKKPIAKP 120

The following BLAST results are available for this feature:

BLAST of CsGy6G008995 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G008995 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46573.1	1.23e-80	100.00	hypothetical protein Csa_005092 [Cucumis sativus]	[more]
TYK14008.1	3.96e-49	75.68	Seed nucellus-specific protein [Cucumis melo var. makuwa]	[more]
AAB82329.1	1.39e-38	62.71	seed nucellus-specific protein [Citrullus lanatus]	[more]
KAA0068070.1	7.27e-33	52.80	Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel...	[more]
KAE8650853.1	8.57e-27	50.41	hypothetical protein Csa_001704, partial [Cucumis sativus]	[more]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAR7	5.94e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1	[more]
A0A5D3CS37	1.92e-49	75.68	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
O22351	6.75e-39	62.71	Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1	[more]
A0A5A7VLH5	3.52e-33	52.80	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L8T2	4.31e-31	49.25	Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S...	[more]

BLAST of CsGy6G008995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G008995.1	CsGy6G008995.1	mRNA