CsGy6G004700 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G004700
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 4316988 .. 4319349 (-)
RNA-Seq ExpressionCsGy6G004700
SyntenyCsGy6G004700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCAGATGGCTGCCTCCTGCTACCGGTGAGATTAAGCTCAACGTGGATGCATCTATTCACTCATCAGAGAGGTTTGGGAAAGTTTTTGAAGGTTGGTTGCGTGTTGTTGGGAGATGTCAATTGCAGTTGTTGAAGTTCAAGATTTGGCTTCAGGTGACCTTTCAAATTGACTCATCTTTAAGGTTAAGGTTGAATCTGATTTCTTAACCTTAGTTAAAGCCATTAACCACAATCTCTTGCTTAATTCTGTTATTGGGGTTATTTTAGTTTAAATTGGAGATGTGTTGATGCAGATGAATCTTTGATTCGTTGAGTTTGTTCCCTGATCCTGTAATGCTGTTGCTTACTCCTTAGCAAAATGGGTCTAATCAAACGGGAAGATTTAGTGTTGGAGTGATTTTTCTCCGTCTTGGCTTTGTTATGATATGGATCCTAATTACATAGTAATGAGGCCTTGTGGATCTTATCTTTTTTCATGATGTGGAACTTTTCTGTGTTTGAGGCTTTACTTATCAACACTTTGCTTTTCATCTTTCTCCCTAAAGCATATATATTTGATGTTGCGAGTTGAGCTATGGTCTGACAAAATAACTTCAATGACCATGACTATGTTGGCTAGTACACGGTTAGCAAGATTAAGTTGTCCATTAATAAAATAGATTGATGGTTTTGTTATGTTTGGTGTTATTGTTTTTACTCGTCTTTATAACCCACTTCTAAATTTGTAATCAACTAACACATACTAATTGACAAATTAGATGTGTCCCATTCAATTGCACCATTATTGTAATTGTTACAATCGAAAAAAGAAATCATTTTGACACTTTAAAAATACCCTTAAACTTTAAAAAATTGTTCAAAAATACAATTTTTTAAAATGAAAACCGTTAAAGTTTTGTTTAAAAGTAACTACCGAAAAGTTTCATAAATACTCTTAAACTTAGAAAAATTTAAAAATAGTCTCACTAATCCAATATTTATACCGAATTTATTAGCACAAAAATAAAAAAATTAAAATCATAGGTTTAAATTTTCATACACTTCTATTGATATTTTCACATGGGTCAATATCTATAGAAAACTTGAATTGATTCATTACATCGTAGAAATATCTACAAATCACAAAATATATATATTTTTTAAGGCGACACTAATATAAATAATACACATACTTACTTATCCAAAAATAATATAATATTTATTTATTAATTTAAATTTATTTTCTCAACTCTTTTTAGAAATATGTCTCAAAATCAAAATTTCGTAAAACTAACACTTCAAAACATTTTAAATTTGGGGTAAAACATAAAATTTCACAAAATTTTACCAAGTTTAAGAAAAAATCTCACACCAATATATTAATGAGTAATATTGTCTATTAAGGCTAAAATACTTTTTTTATTTGACAATTAAGTGTATGCTAACTACAATAATAACCATTGAGAATGGTTGGGTTCATTATTATTGTTGTTGTTAATAATTAAATAAAATTAAAACTATCATTATCATTCTAATTAGTAGGTGAGAAAATTGATTTAAAATTTAGATCAATGAAATTGTTTATTTAACTTTGATTAAACTTAATGATATTTACGAAACATGGGTATTTTTAAACAATTTCTAAAGTTTAAGAATATATATTTTTAAAGCTATTGAAAATTAAGGAATATTTTATCCTCAAACTAAAAAATTCAGCAGCATTTTGTAATTTAGCGTCTTTTGTTACACGCGAACCAACTTTGTTAGAAACTATAAAAGAACTTATATCGTCTAGTTCATCTACGCGCGTGCACGAAGCCCTATCGCGTCGAATCCGCAAGGTTTTCTCTCTGCTTCTGTTTAATTTGAATGTTATTGAAATCTCAGTTCTTTCCGTTCTTACAATTAGCAATTTAGGGATTTTGTGTTCTCTGTATTGATCAAATCTTGGTTACAACTTGATCATTCACCTGTTGGAGATTCGATTCCCCATGTCCTTCTTCAGCATTCTTCTTTATTATCGTTGCGTTCTCTGCACTTCACATCGACTGCGTCTAGACTATTTAATCAGTCATAAATTTCTTCAACGTGATTTTCTTATTTCCTCCCTCATTTCACAATGATTCTGAAACTTTAGGCTGCTGCATGAGAAACTTGCAAGTTTAAGCACTTTTACTTGTTATTTCCCCCTCATTTCACGGTTTTTGTTTTTGTTTCCTACATTAAGCTTAGTGTTTATCGATATGGATAGGTTTTGCATCTTTCTGATGTGTTGTAGAATTTCATATTTATCAGGATTCGGGAAAATGTGAAACCTGCCTACGTATGGATAATGAAGGATTACTTAGTTGAAATCTCAAGGAATCTGGAATTGTAA

mRNA sequence

ATGAAGATCAGATGGCTGCCTCCTGCTACCGGTGAGATTAAGCTCAACGTGGATGCATCTATTCACTCATCAGAGAGGTTTGGGAAAGTTTTTGAAGGTTGGTTGCGTGTTGTTGGGAGATGTCAATTGCAGTTGTTGAAGTTCAAGATTTGGCTTCAGAATTTCATATTTATCAGGATTCGGGAAAATGTGAAACCTGCCTACGTATGGATAATGAAGGATTACTTAGTTGAAATCTCAAGGAATCTGGAATTGTAA

Coding sequence (CDS)

ATGAAGATCAGATGGCTGCCTCCTGCTACCGGTGAGATTAAGCTCAACGTGGATGCATCTATTCACTCATCAGAGAGGTTTGGGAAAGTTTTTGAAGGTTGGTTGCGTGTTGTTGGGAGATGTCAATTGCAGTTGTTGAAGTTCAAGATTTGGCTTCAGAATTTCATATTTATCAGGATTCGGGAAAATGTGAAACCTGCCTACGTATGGATAATGAAGGATTACTTAGTTGAAATCTCAAGGAATCTGGAATTGTAA

Protein sequence

MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRIRENVKPAYVWIMKDYLVEISRNLEL*
Homology
[Close]
BLAST of CsGy6G004700 vs. NCBI nr
Match: KGN46122.1 (hypothetical protein Csa_004920 [Cucumis sativus])

HSP 1 Score: 178 bits (452), Expect = 1.77e-56
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI 60
          MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI
Sbjct: 1  MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI 60

Query: 61 RENVKPAYVWIMKDYLVEISRNLEL 85
          RENVKPAYVWIMKDYLVEISRNLEL
Sbjct: 61 RENVKPAYVWIMKDYLVEISRNLEL 85

[Close]
BLAST of CsGy6G004700 vs. ExPASy TrEMBL
Match: A0A0A0KCK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055920 PE=4 SV=1)

HSP 1 Score: 178 bits (452), Expect = 8.57e-57
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI 60
          MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI
Sbjct: 1  MKIRWLPPATGEIKLNVDASIHSSERFGKVFEGWLRVVGRCQLQLLKFKIWLQNFIFIRI 60

Query: 61 RENVKPAYVWIMKDYLVEISRNLEL 85
          RENVKPAYVWIMKDYLVEISRNLEL
Sbjct: 61 RENVKPAYVWIMKDYLVEISRNLEL 85

The following BLAST results are available for this feature:
BLAST of CsGy6G004700 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G004700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46122.11.77e-56100.00hypothetical protein Csa_004920 [Cucumis sativus][more]
BLAST of CsGy6G004700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCK88.57e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055920 PE=4 SV=1[more]
BLAST of CsGy6G004700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G004700.2CsGy6G004700.2mRNA