CsGy6G004260 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G004260
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 3949531 .. 3950677 (+)
RNA-Seq ExpressionCsGy6G004260
SyntenyCsGy6G004260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTTGAATTTGCGGAGTATATGCTTATGGTTGTAGTTCGCTCTGTTTTTTTGATTTTTTTTAATTGATTTTGTTTGTGTTTATCATCTTGCTGTAGTTATTGAATCCGTAGTTTGCGGTTGGAGGTTTTTGGTTATCTTTTTCGCTTTTCTGAATTGTTTGTTATCGACTGAGGTATGCGTATTTTCGGCATGTTGTTTAAGAATTACAAGCGTTTCGTTTGGTTATGTATTTTTGCTGACTTTCTTTATAAGTTCCGCCACTTGTTTTCTTCTTTAACGTCTTTGATCTTTACGTTACTTGTTGATTATCGTCGTTTCTTTCCATTTTTTTCGGGGATGAGATTTTGATTGACTCCGAGTTTCTCGATCCAAAGGCTGCTGAGGTCGTCTTCTTTTTGTCACTAAAGCGAAGAGAGTTTCAGTCGGCGTGAATATAAATTCATGTTAGAGTGTTAAGTCTTTATCTCTGTTTTTGGTCATAAAACTTCGTTTAAGTTTTGCTTTAGAGACGGAGAATTTTGCTGGAAATTCTTTGGCGAAGATTATACGCAGATCGAACGTGGCGTTTCTTTCACGCAGAGTTTCAAATCTTAGTGTTAAGGGTATGGATTGGAACCGAATAATTAGGAACGCTTGAATTACTTGCAATATTATTTTCATATTGATTTCTCCTACTTTTTTTTTGACGTTTAATTTACTTCTTGTAATAATTAAATTTTGAAACATTTTTTTTATATTATCTTTTAATTTTCTTTCTATTATATAATATATAATTTCTGTATCTTTTGCTCTTTATTAAGTGATTAAATGACGATTTCTCCTCTAGTATGGCTGTTTTTCTTTCTTTCCCTGGCTGAAATGTATATATTTTATATGTTTAATTCGCTGGGCTTATAACCGAGTGTTTCTTCTACGCTTTGTTTATTTTATCTGAGGAGTTTGACTTTTTTTATCTATTTATTTATTATTTTTAAGGGTTGTGTTGGAGCCATAACCATTAATTCTAAGTAATCCTTCTGGTGGTAGCATTTAAGTTTTTAACTAACTATTGAGTTTGTTAATATTTCAACAGGATATCGTGAATGATCAATTTTCTTGGGATGTTTCACCGGAACTTGAAATTCAGTGGCTCCTAAAATAA

mRNA sequence

ATGGAGCTTGAATTTGCGGAGTATATGCTTATGAGACGGAGAATTTTGCTGGAAATTCTTTGGCGAAGATTATACGCAGATCGAACGTGGCGTTTCTTTCACGCAGAGTTTCAAATCTTAGTGTTAAGGGATATCGTGAATGATCAATTTTCTTGGGATGTTTCACCGGAACTTGAAATTCAGTGGCTCCTAAAATAA

Coding sequence (CDS)

ATGGAGCTTGAATTTGCGGAGTATATGCTTATGAGACGGAGAATTTTGCTGGAAATTCTTTGGCGAAGATTATACGCAGATCGAACGTGGCGTTTCTTTCACGCAGAGTTTCAAATCTTAGTGTTAAGGGATATCGTGAATGATCAATTTTCTTGGGATGTTTCACCGGAACTTGAAATTCAGTGGCTCCTAAAATAA

Protein sequence

MELEFAEYMLMRRRILLEILWRRLYADRTWRFFHAEFQILVLRDIVNDQFSWDVSPELEIQWLLK*
Homology
[Close]
BLAST of CsGy6G004260 vs. NCBI nr
Match: KAE8646646.1 (hypothetical protein Csa_005286 [Cucumis sativus])

HSP 1 Score: 134 bits (336), Expect = 2.18e-39
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MELEFAEYMLMRRRILLEILWRRLYADRTWRFFHAEFQILVLRDIVNDQFSWDVSPELEI 60
          MELEFAEYMLMRRRILLEILWRRLYADRTWRFFHAEFQILVLRDIVNDQFSWDVSPELEI
Sbjct: 1  MELEFAEYMLMRRRILLEILWRRLYADRTWRFFHAEFQILVLRDIVNDQFSWDVSPELEI 60

Query: 61 QWLLK 65
          QWLLK
Sbjct: 61 QWLLK 65

[Close]
BLAST of CsGy6G004260 vs. ExPASy TrEMBL
Match: A0A0A0KB61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G051510 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.78e-08
Identity = 27/40 (67.50%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 30 WRFFHAEFQ----ILVLRDIVNDQFSWDVSPELEIQWLLK 65
          WRF    F     +L   DIVNDQFSWDVSPELEIQWLLK
Sbjct: 39 WRFLVIFFAFLNCLLSTEDIVNDQFSWDVSPELEIQWLLK 78

The following BLAST results are available for this feature:
BLAST of CsGy6G004260 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G004260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646646.12.18e-39100.00hypothetical protein Csa_005286 [Cucumis sativus][more]
BLAST of CsGy6G004260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB613.78e-0867.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G051510 PE=4 SV=1[more]
BLAST of CsGy6G004260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G004260.2CsGy6G004260.2mRNA