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CsGy6G004200 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTAGAGAAAGTACAACTCGGAAAATAAAAATTTTCTCGAGAAAACCCTACTCCTACTCTTCCCCCAATCAACCACCTTTCACTCTTCTTTACTCTCTTCACTCTCTTCACTCTCTTCTTCCTTGTTGCCGCTCTACTATCCTTCCCAAATCCACCATCTGATTCTCGTTCTTAATCCATTTCTTCCATTTGGGTAACTTTTTCTCTTCTTGATTTTTCTTGACAGCTTTCCATTTTCTAATATGATCATTTTCTTGCTTCCATTAGGCCTCAATCTCCTTCGTTTTGTTGAACTTGTGCTGGAGGGTCGTTCAAGGTATTGTACTTTATTCTTCTTCTATCTTTATTTGTGTAATGAGATTCTGTTATGGCTGAGATGAATTTTGTTGGGGATGATGAAGAAATTTTGGTGTTTCTTGGCTTGAGGAATTGGAACTGTGTTTATACGCAATTTTGTAATATGGGTTGATGAAGAATAATTATTCTAAAGCTCAATTCTGTACTTACTCTCCCTTTCTTTTTTGTGTTCTTCCTTAGAAAATGTACGTTATGATTTCTTTTTTTGATGAACACTGTCTTTACAGATAGTGTTCGAAGAACATTTAGTTTTAACGTTGGAACTAAAAGAACTAACATTGTTCTCATATGTTGCATTATAGTTCAACAACATGTCGGGTTGGGGGAATTTGATTAATTTGATCTCTTCGTTGAGAATACATGTCTAAACCAGTTGAAATATGTTCTGGTTGACATATGTTGCATTGAGTTTAAAGAGAGTACGGAATTGTTGTTATGGACACTTATACTAGTGGAAACATCTGATCTGACTTAGTTTAGATCAAGAGTTACAAACAATTAAAGCTGAGGCTCTATGATAAGGAAATAAGTGTCAATGACAAGATCTATAGCTAAAAGTCTTCTTACTTCCAACCTTTCAAGCTTCGAGGTCATCCAAGAAGCACAATGGATTTGAAAATCCAGATTCATCCACATTTACTCACGTTCTCTTCTTCTTCTTCTTCTTTTGTAACACATTGGTCCTTTTCTCTATTTTTTTTTAGGTTTCGAACTTTTAATTTACTGTAATTACAGTTGTGTGCTTTTCATTTACATTAAGCTTATCCATTCGGAGAAGGTAGGAAGATAAGTAGTTATTGCAGAAATGGATACGTTATGATGAATTCTCTCAACTGCCATGGTAGCACCCATCTTTATTTTTGTCTACTTTGGTGCAATCCTTCATCTTCAATGAGGCATTGTATGCAACATATATCTCTACCAATATTAAATGCCTAATTTTAGTTTGATTATAAGAATTTTTGCCACTGCAAAGTGCAGTTTGCCATAGGGTATGCCTAAGTTGGGAACAGGACACTTGCCTTGTAAATGTTTATTAGCACTCCGCTCATGTGAGAGAGATTTGTTTAGCTTATAGTTCTAATTTGATGATGAGAGAACTCGTGCATTATTGGGTAAACAAAAGATTTCTGTTATAATCATTTCAACTGGGAATTTATTTGTAGAGTGGTGCTCTGACTTACATCGTACAACCATCATTGTCTTGTGCTTTTTAAGTTCTCCTCATTATCTTCTCCCATATAAACAACCCACTACACAAACTTGCACTTCAAACTTTAGTGTGGCACATTTCAGTCTGTCTAAGAGGTTGTACGATTGAATCCCATGACTGTTTCTCAATTCTTTTTAATTTCTAAAGGAAATATCTGCTCTCTCATGCTCTGATTTTTCTTTTCTTTTCTTTTTTTCTGCAGTCACAAGCAAAAAACCAGCACATGTTTCTAGATGACTAAAAGTAAGTTGACATTGACATGAATTATTCTAGAAGTCTTTTTCTGCTCAAATAAAGTTCTCCTGGCTATATTTAAGGGCATTTCCATGGTGTGATGAAAATGATTGTCGTTGAACGTTTACATTCTTATACAGGAATGGAATCGTATGGTCTGCTAGGCCAAAAAAGGGATGTAAAGCACAAAGGAAGGAATGTTGTTTGGTCAGTTGCAATGGACAAGTGCCTTATTGAAGCTCTTGCTATTCAGGCAAGAAATGGGAATAAAATTGACAGATGCTTTAATGAAAATGCATATACAGCTGCATGTATTGCTGTAAATAGTCATTTTAACTTAAACTTGAACAACCAGAAAGTTATCAATCGTCTAAAGACGATTAAGAAGAGGTACAAAGTAATCAAGGATATTCTTTGTCGAGACGGATTTCGGTGGAATCCGACTTCTAAGATGATTGAGTGTGACAGCGAAGACCTTTGGAAGAGATATGTGGCAGTGAGTAGATGTTTCTCTCATCACTTCTTCAAATCTAAAAAACATCCCAACTATTATGGAATTGTTCATGTATAACAATATTCAATTCGTGGAATAGGCACACCCCGATGCGAGAGGAATCAGAGGGAAGCCAATAGAGATGTATGATGAACTAAACATTGTTTGTGGCAATTATCAGGCCCCGAGTCAATGGGCGAAGATGAAGGACGGAAACCATGCACTTCAAGTCAGGAATTTTGAGGAAGAGTCTGCATCATTTCACTCCCCAAGCTCGGAAGATCTTAGTGAAACAGATAATACAGAGTCATATACTGGACCGTGTGAATATGCAGAACTGCCCAATGGTAGTCAAGACCCTCTACCAAACAACCCGACGAGACAACAACCGAAGAGACCACGGGCATCTGAAGCTCTCCAAGATGCAATGCTGGCCGTGGCGTCTAGTATTCGTCGTCTGGCCGATGCAATGGAACTGAGCAAGCACTCAATAGATGCCAATGAACTGTTAGAAGCTGTAATGGAGGTTGATGGTTTGGAGGAGGCTAAACAAATGTATGCCTTCGAATATTTGAACGCCGATCCGGTGAAAGCCCGAGCGTTCTTGACATATAATGCTCGAATGAGGAAGATTTATTTGTTTCGCCAGTTTTGGTGGTGGAAGTAATGATCAGCGATTGTTTGATTCCTGTGTACTACGTGAGATAGATTAAATTGAACTTGTTTTTATCATTATTTGCACATTATTGGAATCATTTCTGATTGGTACTATGAATATAAATGTATAGATAATTCAATTGAAGAGATACTGACATTGCAGAAGTTTTTAGTGCTTCTAGTTGTAAACTCAAATCCTTTTCTTTTGATACTTCAAAATGGTGTAGGTTGGATATTTCAAGGTTCTCTAAAT GTTTTAGAGAAAGTACAACTCGGAAAATAAAAATTTTCTCGAGAAAACCCTACTCCTACTCTTCCCCCAATCAACCACCTTTCACTCTTCTTTACTCTCTTCACTCTCTTCACTCTCTTCTTCCTTGTTGCCGCTCTACTATCCTTCCCAAATCCACCATCTGATTCTCGTTCTTAATCCATTTCTTCCATTTGGGCCTCAATCTCCTTCGTTTTGTTGAACTTGTGCTGGAGGGTCGTTCAAGTCACAAGCAAAAAACCAGCACATGTTTCTAGATGACTAAAAGAATGGAATCGTATGGTCTGCTAGGCCAAAAAAGGGATGTAAAGCACAAAGGAAGGAATGTTGTTTGGTCAGTTGCAATGGACAAGTGCCTTATTGAAGCTCTTGCTATTCAGGCAAGAAATGGGAATAAAATTGACAGATGCTTTAATGAAAATGCATATACAGCTGCATGTATTGCTGTAAATAGTCATTTTAACTTAAACTTGAACAACCAGAAAGTTATCAATCGTCTAAAGACGATTAAGAAGAGGTACAAAGTAATCAAGGATATTCTTTGTCGAGACGGATTTCGGTGGAATCCGACTTCTAAGATGATTGAGTGTGACAGCGAAGACCTTTGGAAGAGATATGTGGCAGCACACCCCGATGCGAGAGGAATCAGAGGGAAGCCAATAGAGATGTATGATGAACTAAACATTGTTTGTGGCAATTATCAGGCCCCGAGTCAATGGGCGAAGATGAAGGACGGAAACCATGCACTTCAAGTCAGGAATTTTGAGGAAGAGTCTGCATCATTTCACTCCCCAAGCTCGGAAGATCTTAGTGAAACAGATAATACAGAGTCATATACTGGACCGTGTGAATATGCAGAACTGCCCAATGGTAGTCAAGACCCTCTACCAAACAACCCGACGAGACAACAACCGAAGAGACCACGGGCATCTGAAGCTCTCCAAGATGCAATGCTGGCCGTGGCGTCTAGTATTCGTCGTCTGGCCGATGCAATGGAACTGAGCAAGCACTCAATAGATGCCAATGAACTGTTAGAAGCTGTAATGGAGGTTGATGGTTTGGAGGAGGCTAAACAAATGTATGCCTTCGAATATTTGAACGCCGATCCGGTGAAAGCCCGAGCGTTCTTGACATATAATGCTCGAATGAGGAAGATTTATTTGTTTCGCCAGTTTTGGTGGTGGAAGTAATGATCAGCGATTGTTTGATTCCTGTGTACTACGTGAGATAGATTAAATTGAACTTGTTTTTATCATTATTTGCACATTATTGGAATCATTTCTGATTGGTACTATGAATATAAATGTATAGATAATTCAATTGAAGAGATACTGACATTGCAGAAGTTTTTAGTGCTTCTAGTTGTAAACTCAAATCCTTTTCTTTTGATACTTCAAAATGGTGTAGGTTGGATATTTCAAGGTTCTCTAAAT ATGACTAAAAGAATGGAATCGTATGGTCTGCTAGGCCAAAAAAGGGATGTAAAGCACAAAGGAAGGAATGTTGTTTGGTCAGTTGCAATGGACAAGTGCCTTATTGAAGCTCTTGCTATTCAGGCAAGAAATGGGAATAAAATTGACAGATGCTTTAATGAAAATGCATATACAGCTGCATGTATTGCTGTAAATAGTCATTTTAACTTAAACTTGAACAACCAGAAAGTTATCAATCGTCTAAAGACGATTAAGAAGAGGTACAAAGTAATCAAGGATATTCTTTGTCGAGACGGATTTCGGTGGAATCCGACTTCTAAGATGATTGAGTGTGACAGCGAAGACCTTTGGAAGAGATATGTGGCAGCACACCCCGATGCGAGAGGAATCAGAGGGAAGCCAATAGAGATGTATGATGAACTAAACATTGTTTGTGGCAATTATCAGGCCCCGAGTCAATGGGCGAAGATGAAGGACGGAAACCATGCACTTCAAGTCAGGAATTTTGAGGAAGAGTCTGCATCATTTCACTCCCCAAGCTCGGAAGATCTTAGTGAAACAGATAATACAGAGTCATATACTGGACCGTGTGAATATGCAGAACTGCCCAATGGTAGTCAAGACCCTCTACCAAACAACCCGACGAGACAACAACCGAAGAGACCACGGGCATCTGAAGCTCTCCAAGATGCAATGCTGGCCGTGGCGTCTAGTATTCGTCGTCTGGCCGATGCAATGGAACTGAGCAAGCACTCAATAGATGCCAATGAACTGTTAGAAGCTGTAATGGAGGTTGATGGTTTGGAGGAGGCTAAACAAATGTATGCCTTCGAATATTTGAACGCCGATCCGGTGAAAGCCCGAGCGTTCTTGACATATAATGCTCGAATGAGGAAGATTTATTTGTTTCGCCAGTTTTGGTGGTGGAAGTAA MTKRMESYGLLGQKRDVKHKGRNVVWSVAMDKCLIEALAIQARNGNKIDRCFNENAYTAACIAVNSHFNLNLNNQKVINRLKTIKKRYKVIKDILCRDGFRWNPTSKMIECDSEDLWKRYVAAHPDARGIRGKPIEMYDELNIVCGNYQAPSQWAKMKDGNHALQVRNFEEESASFHSPSSEDLSETDNTESYTGPCEYAELPNGSQDPLPNNPTRQQPKRPRASEALQDAMLAVASSIRRLADAMELSKHSIDANELLEAVMEVDGLEEAKQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK* Homology
BLAST of CsGy6G004200 vs. NCBI nr
Match: XP_004140924.1 (uncharacterized protein LOC101213668 [Cucumis sativus] >XP_031744107.1 uncharacterized protein LOC101213668 [Cucumis sativus] >KGN46070.1 hypothetical protein Csa_005033 [Cucumis sativus]) HSP 1 Score: 626 bits (1614), Expect = 3.00e-226 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CsGy6G004200 vs. NCBI nr
Match: XP_008456640.1 (PREDICTED: uncharacterized protein LOC103496536 isoform X1 [Cucumis melo] >XP_008456641.1 PREDICTED: uncharacterized protein LOC103496536 isoform X1 [Cucumis melo]) HSP 1 Score: 615 bits (1587), Expect = 3.92e-222 Identity = 305/310 (98.39%), Postives = 308/310 (99.35%), Query Frame = 0
BLAST of CsGy6G004200 vs. NCBI nr
Match: XP_038885642.1 (uncharacterized protein LOC120075957 [Benincasa hispida] >XP_038885643.1 uncharacterized protein LOC120075957 [Benincasa hispida] >XP_038885644.1 uncharacterized protein LOC120075957 [Benincasa hispida] >XP_038885645.1 uncharacterized protein LOC120075957 [Benincasa hispida] >XP_038885646.1 uncharacterized protein LOC120075957 [Benincasa hispida]) HSP 1 Score: 612 bits (1578), Expect = 9.22e-221 Identity = 303/310 (97.74%), Postives = 307/310 (99.03%), Query Frame = 0
BLAST of CsGy6G004200 vs. NCBI nr
Match: XP_016901970.1 (PREDICTED: uncharacterized protein LOC103496536 isoform X2 [Cucumis melo] >KAA0031712.1 uncharacterized protein E6C27_scaffold139G004990 [Cucumis melo var. makuwa] >TYK30392.1 uncharacterized protein E5676_scaffold2254G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 608 bits (1568), Expect = 2.66e-219 Identity = 301/306 (98.37%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsGy6G004200 vs. NCBI nr
Match: XP_023550438.1 (uncharacterized protein LOC111808583 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 596 bits (1537), Expect = 1.64e-214 Identity = 293/310 (94.52%), Postives = 303/310 (97.74%), Query Frame = 0
BLAST of CsGy6G004200 vs. ExPASy TrEMBL
Match: A0A0A0K8L4 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G051470 PE=4 SV=1) HSP 1 Score: 626 bits (1614), Expect = 1.45e-226 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CsGy6G004200 vs. ExPASy TrEMBL
Match: A0A1S3C4E4 (uncharacterized protein LOC103496536 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496536 PE=4 SV=1) HSP 1 Score: 615 bits (1587), Expect = 1.90e-222 Identity = 305/310 (98.39%), Postives = 308/310 (99.35%), Query Frame = 0
BLAST of CsGy6G004200 vs. ExPASy TrEMBL
Match: A0A5A7SKV5 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2254G00050 PE=4 SV=1) HSP 1 Score: 608 bits (1568), Expect = 1.29e-219 Identity = 301/306 (98.37%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsGy6G004200 vs. ExPASy TrEMBL
Match: A0A1S4E1W1 (uncharacterized protein LOC103496536 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496536 PE=4 SV=1) HSP 1 Score: 608 bits (1568), Expect = 1.29e-219 Identity = 301/306 (98.37%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsGy6G004200 vs. ExPASy TrEMBL
Match: A0A6J1FGR7 (uncharacterized protein LOC111445529 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445529 PE=4 SV=1) HSP 1 Score: 595 bits (1534), Expect = 2.28e-214 Identity = 292/310 (94.19%), Postives = 303/310 (97.74%), Query Frame = 0
BLAST of CsGy6G004200 vs. TAIR 10
Match: AT4G02550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 397.9 bits (1021), Expect = 7.5e-111 Identity = 195/309 (63.11%), Postives = 246/309 (79.61%), Query Frame = 0
BLAST of CsGy6G004200 vs. TAIR 10
Match: AT4G02550.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 397.9 bits (1021), Expect = 7.5e-111 Identity = 195/309 (63.11%), Postives = 246/309 (79.61%), Query Frame = 0
BLAST of CsGy6G004200 vs. TAIR 10
Match: AT4G02550.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 350 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 13; Plants - 331; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 370.9 bits (951), Expect = 9.8e-103 Identity = 185/307 (60.26%), Postives = 230/307 (74.92%), Query Frame = 0
BLAST of CsGy6G004200 vs. TAIR 10
Match: AT4G02550.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). ) HSP 1 Score: 370.9 bits (951), Expect = 9.8e-103 Identity = 185/307 (60.26%), Postives = 230/307 (74.92%), Query Frame = 0
BLAST of CsGy6G004200 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 99.4 bits (246), Expect = 5.5e-21 Identity = 78/281 (27.76%), Postives = 130/281 (46.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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