CsGy6G004030 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGCCACACCACACCTCACCTCACCGTACTCTTCCAAACCCTTTCCTTCCTTTCTTCAGGTCAGTTCTTTCTAGGGTTCTTAATTCTCTTTCCGATCGCCCCTCTTATCCAATTCTTTGTTCATTTTATTCTTTTGTTTTTATCATTTATCAAGTTTGTTTCATTCGTATCTCATGTTTTGGAGAATTGAATTGTAGATATACTGATTCTGCCTCATTCATTTTTCTACTTTAAGCCTTTGGGCTGTTTTTATGAGTTGTTTCTGATGATGAATGGCTCATTTACTTGTAGCTGTCTGGTGTTCACTCTATATTTTTCAATAATGTAGGTCATAAGTTTGTATGTTTCTCTACTTTTTTTTCTTCCAAGTGTATTTGTTGAATTGTATGTTGTTTTTTTCCTTGAGGATTTGCTATTACAGTGTATGGAAAAGTCTTTTTTTATTTTTATTTTTATGTAGATGTACGCTTCAAAGATCTGTGAATGTAGTGTAATCTATGTTAGATTTCTTGTTCTTATTTATTTACGGTTTTCTTCTTAGGTAAAGTTTGGTAGAAGATGGGTCGTGTTAGAACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAGAAGTACTACTCGAAAATGACACTGGATTTTCACACGAACAAGAAGATCTTGGAAGAGGTTGCAATCATCCCCTCCAAAAGGCTGCGAAACAAGATTGCTGGATTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTTCAAGAAGAAGAGCGTGAACGCCGTATGGACTTTGTCCCAGATGAATCAGCCATTAAGATTGACGAAATTAAGGTTGATAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCGGACATTCCTGGACTTGTGGAGGTTGAGCCACAAGCTATGATTCCTCCCCAAGCTTTTGGAAGGGGTGCAGGTGGCCCAAGGAGATACTAAGGTAAGGTAATTGAGACTACTCAACAGCTTTTGGGAATTAGAAGTTTTTTGTTATTTAATATCATAAGGCCATGGATATTATTGTTGCTAGTTACTATCAGATTGGTCCTTAAATGTTTGACTTGTCTTTTTAGTTTTGATTTTGAATGGATGTTTAAATCATTTTGGACATGGATGATGATACTTTTGTTTTAAGTTTTGAAGATCTCTGAAGTAAACGTTTTTGGTATTAGTCAGATTTCACAATTGCCATTCCTTCTTTTAGTTCAGCTTCTTCTAATTTGGCTCTGTTTCAAGGCTTTTCTCTTGATAAACCATGTTGGGTGCATTATAATCTTTAGTTATAAGATTTCAATTCCTATCCCCCATATGCGAAGTCACTACAATGATGATATGGGTTGTGATTTTTGGATTAGATTTGATGTTAACCTCAATATGTGTGTTATAGAGATAGATGATGATTCAATGTATAGTTTCACTTATTGTGTTAGTGTTTTGTTTTATCAGATATATTCCTTTTGTTCTTGTGGAGGTTCTGATTTTATAGGGCATGATCACTGTCTGAACAAAACATCACATTTTTTCAAATGAAATTCTTGTATCTCATAAATTGTCAAGCCACTAACGAAAAAATTATATCAAATTGGAGAGAGTTTAGGTTTAGAGTTTGATATCACTTCTATACTATCAACTAATAAATTTAATTAAAAGAATCAAACCGTTTCTAAAATTCCATTAACTCAATCAAGAGTTATCGTTAATGAGATTCACATATTCTAAATGCAATCTATCAAGATTGAGGAGCTTTCAGAATGTACTATTAGATTTAATCTCCAAATTCGTTGCAATACATCACTAACAATTCAATCAATGGGATCAAAGATCAGTACAGAATATGAATTCTAATGATTTGTTGCAGCTAAATTTCATAATCCTCTTTGATTTATTTGGTTGCCTCACCTTTTCAATCCCTTGAGATGTAGAAGTAGACTCGAGTATTCTTTCTTTTCAATTTTTTTCAACATAACTTGTTAGGATTCACCCTAATTATATTTTTAGATGTAAAATGCCTATTTTTGGGTTATTTATTATTCAACACAAGAGGAGGTTTTTCAATCCGATCGAGTAATAAAGGCGAGAAGCAAAGGTTTGTGATTCATTTCCTCAAACTTGGGATGATCATAGAGGAACTTTGGTATGAGTTTGTCGAG GGCAGCCACACCACACCTCACCTCACCGTACTCTTCCAAACCCTTTCCTTCCTTTCTTCAGGTAAAGTTTGGTAGAAGATGGGTCGTGTTAGAACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAGAAGTACTACTCGAAAATGACACTGGATTTTCACACGAACAAGAAGATCTTGGAAGAGGTTGCAATCATCCCCTCCAAAAGGCTGCGAAACAAGATTGCTGGATTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTTCAAGAAGAAGAGCGTGAACGCCGTATGGACTTTGTCCCAGATGAATCAGCCATTAAGATTGACGAAATTAAGGTTGATAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCGGACATTCCTGGACTTGTGGAGGTTGAGCCACAAGCTATGATTCCTCCCCAAGCTTTTGGAAGGGGTGCAGGTGGCCCAAGGAGATACTAAGGTAAGGTAATTGAGACTACTCAACAGCTTTTGGGAATTAGAAGTTTTTTGTTATTTAATATCATAAGGCCATGGATATTATTGTTGCTAGTTACTATCAGATTGGTCCTTAAATGTTTGACTTGTCTTTTTAGTTTTGATTTTGAATGGATGTTTAAATCATTTTGGACATGGATGATGATACTTTTGTTTTAAGTTTTGAAGATCTCTGAAGTAAACGTTTTTGGTATTAGTCAGATTTCACAATTGCCATTCCTTCTTTTAGTTCAGCTTCTTCTAATTTGGCTCTGTTTCAAGGCTTTTCTCTTGATAAACCATGTTGGGTGCATTATAATCTTTAGTTATAAGATTTCAATTCCTATCCCCCATATGCGAAGTCACTACAATGATGATATGGGTTGTGATTTTTGGATTAGATTTGATGTTAACCTCAATATGTGTGTTATAGAGATAGATGATGATTCAATGTATAGTTTCACTTATTGTGTTAGTGTTTTGTTTTATCAGATATATTCCTTTTGTTCTTGTGGAGGTTCTGATTTTATAGGGCATGATCACTGTCTGAACAAAACATCACATTTTTTCAAATGAAATTCTTGTATCTCATAAATTGTCAAGCCACTAACGAAAAAATTATATCAAATTGGAGAGAGTTTAGGTTTAGAGTTTGATATCACTTCTATACTATCAACTAATAAATTTAATTAAAAGAATCAAACCGTTTCTAAAATTCCATTAACTCAATCAAGAGTTATCGTTAATGAGATTCACATATTCTAAATGCAATCTATCAAGATTGAGGAGCTTTCAGAATGTACTATTAGATTTAATCTCCAAATTCGTTGCAATACATCACTAACAATTCAATCAATGGGATCAAAGATCAGTACAGAATATGAATTCTAATGATTTGTTGCAGCTAAATTTCATAATCCTCTTTGATTTATTTGGTTGCCTCACCTTTTCAATCCCTTGAGATGTAGAAGTAGACTCGAGTATTCTTTCTTTTCAATTTTTTTCAACATAACTTGTTAGGATTCACCCTAATTATATTTTTAGATGTAAAATGCCTATTTTTGGGTTATTTATTATTCAACACAAGAGGAGGTTTTTCAATCCGATCGAGTAATAAAGGCGAGAAGCAAAGGTTTGTGATTCATTTCCTCAAACTTGGGATGATCATAGAGGAACTTTGGTATGAGTTTGTCGAG ATGGGTCGTGTTAGAACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAGAAGTACTACTCGAAAATGACACTGGATTTTCACACGAACAAGAAGATCTTGGAAGAGGTTGCAATCATCCCCTCCAAAAGGCTGCGAAACAAGATTGCTGGATTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTTCAAGAAGAAGAGCGTGAACGCCGTATGGACTTTGTCCCAGATGAATCAGCCATTAAGATTGACGAAATTAAGGTTGATAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCGGACATTCCTGGACTTGTGGAGGTTGAGCCACAAGCTATGATTCCTCCCCAAGCTTTTGGAAGGGGTGCAGGTGGCCCAAGGAGATACTAA MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEVEPQAMIPPQAFGRGAGGPRRY* Homology
BLAST of CsGy6G004030 vs. ExPASy Swiss-Prot
Match: Q9LZ17 (40S ribosomal protein S17-4 OS=Arabidopsis thaliana OX=3702 GN=RPS17D PE=2 SV=3) HSP 1 Score: 232.6 bits (592), Expect = 2.7e-60 Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy Swiss-Prot
Match: Q9SQZ1 (40S ribosomal protein S17-3 OS=Arabidopsis thaliana OX=3702 GN=RPS17C PE=2 SV=3) HSP 1 Score: 229.2 bits (583), Expect = 3.0e-59 Identity = 119/140 (85.00%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy Swiss-Prot
Match: Q9SJ36 (40S ribosomal protein S17-2 OS=Arabidopsis thaliana OX=3702 GN=RPS17B PE=2 SV=3) HSP 1 Score: 228.0 bits (580), Expect = 6.6e-59 Identity = 124/142 (87.32%), Postives = 128/142 (90.14%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy Swiss-Prot
Match: P49205 (40S ribosomal protein S17-1 OS=Arabidopsis thaliana OX=3702 GN=RPS17A PE=2 SV=3) HSP 1 Score: 227.6 bits (579), Expect = 8.6e-59 Identity = 123/142 (86.62%), Postives = 128/142 (90.14%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy Swiss-Prot
Match: P49215 (40S ribosomal protein S17 OS=Solanum lycopersicum OX=4081 GN=RPS17 PE=2 SV=3) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58 Identity = 119/139 (85.61%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of CsGy6G004030 vs. NCBI nr
Match: XP_004140911.1 (40S ribosomal protein S17-3 [Cucumis sativus] >KGN46049.1 hypothetical protein Csa_005187 [Cucumis sativus]) HSP 1 Score: 271 bits (692), Expect = 2.67e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CsGy6G004030 vs. NCBI nr
Match: XP_008456611.1 (PREDICTED: 40S ribosomal protein S17-3 [Cucumis melo] >TYK11778.1 40S ribosomal protein S17-3 [Cucumis melo var. makuwa]) HSP 1 Score: 270 bits (689), Expect = 7.65e-91 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CsGy6G004030 vs. NCBI nr
Match: XP_022134321.1 (40S ribosomal protein S17-4 [Momordica charantia]) HSP 1 Score: 265 bits (677), Expect = 5.18e-89 Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of CsGy6G004030 vs. NCBI nr
Match: XP_038884069.1 (40S ribosomal protein S17-4 [Benincasa hispida]) HSP 1 Score: 265 bits (676), Expect = 7.35e-89 Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of CsGy6G004030 vs. NCBI nr
Match: XP_022961398.1 (40S ribosomal protein S17-4 [Cucurbita moschata] >XP_022990482.1 40S ribosomal protein S17-4 [Cucurbita maxima] >XP_023523463.1 40S ribosomal protein S17-4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 264 bits (674), Expect = 1.48e-88 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy TrEMBL
Match: A0A0A0KB47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046270 PE=3 SV=1) HSP 1 Score: 271 bits (692), Expect = 1.29e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy TrEMBL
Match: A0A5D3CKV8 (40S ribosomal protein S17-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001050 PE=3 SV=1) HSP 1 Score: 270 bits (689), Expect = 3.71e-91 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy TrEMBL
Match: A0A1S3C4X5 (40S ribosomal protein S17-3 OS=Cucumis melo OX=3656 GN=LOC103496520 PE=3 SV=1) HSP 1 Score: 270 bits (689), Expect = 3.71e-91 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy TrEMBL
Match: A0A6J1BXJ2 (40S ribosomal protein S17-4 OS=Momordica charantia OX=3673 GN=LOC111006610 PE=3 SV=1) HSP 1 Score: 265 bits (677), Expect = 2.51e-89 Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of CsGy6G004030 vs. ExPASy TrEMBL
Match: A0A6J1JIV8 (40S ribosomal protein S17-4 OS=Cucurbita maxima OX=3661 GN=LOC111487331 PE=3 SV=1) HSP 1 Score: 264 bits (674), Expect = 7.19e-89 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of CsGy6G004030 vs. TAIR 10
Match: AT5G04800.1 (Ribosomal S17 family protein ) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61 Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of CsGy6G004030 vs. TAIR 10
Match: AT5G04800.2 (Ribosomal S17 family protein ) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61 Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of CsGy6G004030 vs. TAIR 10
Match: AT5G04800.3 (Ribosomal S17 family protein ) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61 Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of CsGy6G004030 vs. TAIR 10
Match: AT5G04800.4 (Ribosomal S17 family protein ) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61 Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of CsGy6G004030 vs. TAIR 10
Match: AT3G10610.1 (Ribosomal S17 family protein ) HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60 Identity = 119/140 (85.00%), Postives = 128/140 (91.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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