CsGy6G003770 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G003770
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 3573207 .. 3573504 (-)
RNA-Seq ExpressionCsGy6G003770
SyntenyCsGy6G003770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTACAAAGCAAACGGTGTTCATTCATCAAAAGCCTTTACAGATAGTGATGTGTGTGCGATTAGATGTATGAATAGTTGAAAGAGGAGGTGATGGTAGAGGTGGAGATAAGAAAAGGCTAATGATGAACAAAGCCATCTGCAACCTTTCAATTTATATTGATTTTCCATCATTGGGCAAAACTGAAGTTCCTAATATCAATCAAGACAAGAAAAGCCTAAGAATTTATAGCCAAAAGAGCAAGAAGAAGAATCAGGGCACAAAAGCATATGAAGGATTTTATAGAGAGCTCTAA

mRNA sequence

ATGCGGTACAAAGCAAACGTTGAAAGAGGAGGTGATGGTAGAGGTGGAGATAAGAAAAGGCTAATGATGAACAAAGCCATCTGCAACCTTTCAATTTATATTGATTTTCCATCATTGGGCAAAACTGAAGTTCCTAATATCAATCAAGACAAGAAAAGCCTAAGAATTTATAGCCAAAAGAGCAAGAAGAAGAATCAGGGCACAAAAGCATATGAAGGATTTTATAGAGAGCTCTAA

Coding sequence (CDS)

ATGCGGTACAAAGCAAACGTTGAAAGAGGAGGTGATGGTAGAGGTGGAGATAAGAAAAGGCTAATGATGAACAAAGCCATCTGCAACCTTTCAATTTATATTGATTTTCCATCATTGGGCAAAACTGAAGTTCCTAATATCAATCAAGACAAGAAAAGCCTAAGAATTTATAGCCAAAAGAGCAAGAAGAAGAATCAGGGCACAAAAGCATATGAAGGATTTTATAGAGAGCTCTAA

Protein sequence

MRYKANVERGGDGRGGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQGTKAYEGFYREL*
Homology
[Close]
BLAST of CsGy6G003770 vs. NCBI nr
Match: KAE8646628.1 (hypothetical protein Csa_023588, partial [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 1.06e-44
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 7  VERGGDGRGGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQ 66
          VERGGDGRGGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQ
Sbjct: 2  VERGGDGRGGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQ 61

Query: 67 GTKAYEGFYREL 78
          GTKAYEGFYREL
Sbjct: 62 GTKAYEGFYREL 73

[Close]
BLAST of CsGy6G003770 vs. ExPASy TrEMBL
Match: A0A0A0K8H8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044010 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 1.66e-38
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 15 GGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQGTKAYEGF 74
          GGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQGTKAYEGF
Sbjct: 30 GGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQGTKAYEGF 89

Query: 75 YREL 78
          YREL
Sbjct: 90 YREL 93

The following BLAST results are available for this feature:
BLAST of CsGy6G003770 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G003770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646628.11.06e-44100.00hypothetical protein Csa_023588, partial [Cucumis sativus][more]
BLAST of CsGy6G003770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8H81.66e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044010 PE=4 SV=1[more]
BLAST of CsGy6G003770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G003770.2CsGy6G003770.2mRNA