CsGy6G003205 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G003205
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 2641479 .. 2641658 (+)
RNA-Seq ExpressionCsGy6G003205
SyntenyCsGy6G003205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGTTGTTCCATCCCAAACCCAAAGGAAGTAAAGATAGGGAGGAAAAGGGACTAAGAATAGGCGGGAAGCAAACCCATAAGAGATGTCTCAGTAAGGAGTTGGCAGGGCAATTTGGCTGTTCGGCCCAATGGGAGGCCAATGTCGTCGATACCAACTTTGTCTCTGAAGCTTAG

mRNA sequence

ATGAAGGGGTTGTTCCATCCCAAACCCAAAGGAAGTAAAGATAGGGAGGAAAAGGGACTAAGAATAGGCGGGAAGCAAACCCATAAGAGATGTCTCAGTAAGGAGTTGGCAGGGCAATTTGGCTGTTCGGCCCAATGGGAGGCCAATGTCGTCGATACCAACTTTGTCTCTGAAGCTTAG

Coding sequence (CDS)

ATGAAGGGGTTGTTCCATCCCAAACCCAAAGGAAGTAAAGATAGGGAGGAAAAGGGACTAAGAATAGGCGGGAAGCAAACCCATAAGAGATGTCTCAGTAAGGAGTTGGCAGGGCAATTTGGCTGTTCGGCCCAATGGGAGGCCAATGTCGTCGATACCAACTTTGTCTCTGAAGCTTAG

Protein sequence

MKGLFHPKPKGSKDREEKGLRIGGKQTHKRCLSKELAGQFGCSAQWEANVVDTNFVSEA*
Homology
[Close]
BLAST of CsGy6G003205 vs. NCBI nr
Match: KGN45951.1 (hypothetical protein Csa_005262 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 1.84e-07
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 1  MKGLFHPKPKGSKDREEKGLRIGG 24
          MKGLFHPKPKGSKDREEKGLRIGG
Sbjct: 1  MKGLFHPKPKGSKDREEKGLRIGG 24

[Close]
BLAST of CsGy6G003205 vs. ExPASy TrEMBL
Match: A0A0A0KDU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032490 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.92e-08
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 1  MKGLFHPKPKGSKDREEKGLRIGG 24
          MKGLFHPKPKGSKDREEKGLRIGG
Sbjct: 1  MKGLFHPKPKGSKDREEKGLRIGG 24

The following BLAST results are available for this feature:
BLAST of CsGy6G003205 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G003205 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45951.11.84e-07100.00hypothetical protein Csa_005262 [Cucumis sativus][more]
BLAST of CsGy6G003205 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDU98.92e-08100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032490 PE=4 SV=1[more]
BLAST of CsGy6G003205 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G003205.1CsGy6G003205.1mRNA