CsGy6G002490 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G002490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNA excision repair protein ERCC-1
Location	Gy14Chr6: 1833309 .. 1839488 (-)
RNA-Seq Expression	CsGy6G002490
Synteny	CsGy6G002490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGGTGGTGAATCATTAACAGAGGTCTCATCCCTACAAAAGAATCTCACAAAAGCCCTCTGGACATCTCAATTTTCATAATCTGAAACAGCAGAAAGGGTAGAAGATTATGGAGGAAGGAAGCGCAGAAGACAACTTTCAGCAAACCCCTCACAAGAAGAGCAAGACCATTATCAAGATACCCTCATATCAAGAAGTCATCGATAGCTCACAGCCAAACTCACAATCCTTCTCCCAAGCCTTTGCCTTCCTCAAATCCTCCGAGTTTTACTCTCCTCCACCAAAACCACCATCTCCTTCCTCCTCCCAATCCTTGCCGCCTTCCAACATCACAAACCCAAGGTACTTGTTTCCCCCATTTCCCTTTCCAACTCACCGTTTCATTCACTGCCTCTTGAATTTAATTTTTGTTTTCTCCCCCTTATTTTTATATGATTTTGTCTTTTGGGTTTGTTGGATTTCGATGTCTATGTGTGGGTTGTTGTTGATTTCAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTGCAGCTACTCCGGTTAATAGCTTGTCGGTGTCGAGTTCTGTTAGTCGCAATGCCATTCTTGTCAGCAATAGACAGGTGAGATTGTTAATATAAGGCACTTGGGGTGTGTAACCATCTTAATTTGAATTGGTAGTTGGCACATCGTGTTTTTCCATTTCGGAATTTCGTTGTGAGTTTATAAATGATTTCACTGGCTTGCTATCTTGTAGCTTAGCTTTCCATGGAAGATGCGTCAATCATGATTTCTAGGAAGATTGAATAATAATACACGAATCTTAGGTCATGACTTATTAATATCAAATTTAGTAATGATGGAAGGTTTCAGGGTTCGTGAAAGCATATCTGAAGCATTTGCTACTTGCTGATGGTATAACTCTTTTACGACAGTGTTAGGAAGTAATTCGGTAATCTTAGTGAAATGTGGATGGTCTTTGAAGAGATCTCTTGGTCTAGCATTAACAGATTGAAACTCTCAAGCTTAGCAGTTAAACTGTGATGCGCTAAATAAGAAAATGAGGTCAATTGGTTAGTTGTAAAAGTGTTCTACTCCTGCTTTGTTATTTTTGTTTTCCTTTTTCTGTGACACTTGGTAGAATTCCTTATTCGGTTGGTGAGAGTGATCAAGTACAAAAGAAACTTCCATGGTGAAATAAACAAAGGAAACTTGCTGTCAGTCTATGTTATAGACAATAAGTATTCTTTTTTATTGCCCTTTCCTTTTTAGAAACTCTGGTGTTACCCGGATTCTCATCTGAAAGTCTTCAAGAGGACAGTGGATCTCATCTTGTTGAGTTGGAGGTTGTGTCCTTATTAGTTACTGATGGGGTATAGGTGTTGGGAATCTAGTGAAAGTTATTGGAAACGAAGGTTATGATGACGGTTAAATTATATGTGTGGTTGGTTTTGTTAGGGGAGCTAATATTGTCTGCTCTATTGGATTCCGATGTTAATTATCTGACAGGGAAATGAGGGATATCGTTGCTCCATTTTCTTTATTGTGGGCTTTTTAGTGTCGCGATGGGAGAAGGGGTTTTTGTGTGTGGTTGCATAATCATCCGGAGGGGTTTTCCAGTAATTCCCTTTTTCTTTGTCTGGTCGATCCTTCTCTCTTGAGAGATTCAGTCTTTGCCTTGATGTGGAGGATGAGAATCCTTAAGAAGATTAAGTTCTTTATTTGGTTGGTTGTTCATGGTAGGGTTAATACTGTAGACAAGATGTCAAGGAGGATCCTTTCCTTGATGGGGTAGTGCTGCTCCATTTTTTGGAGGAGAACTGCAAAGGACCTTGATCATTTTCTTTGGAGTCATGACTTTTGATTTTGTTTTGCTATGTGGACTTTTTTTTTTATAAGTTTGGTTTTTTTCTTGTGTCTGATGGGAGCATGTCTAGCAGGATCGAACTCCTTATGATGTTTGGTCCTTTCCTAGGTTCCATATATCCTTATGGGCTTTGGTTATGAAGCTATTTTTTATAATTATCCACTTTGTTTTATCTTGTTTGGTACTTCAGCTTTTTGGAATTAAAAGCAGAGGATACTTACATTTATATTTAAATTAAGAGAAAAGAGGTGTTAAAATACCCCAATTCCTAAACATCAGCTCATGAGCTTGCTCTACGATTGTTCTTGTATTTCTCCTCATTTCCTTTTCTAGCCATACAAATTTTAGTATGGCGAAGAAGCTAACCTACCAGAGGTTGCATGAAGTCTTTGTTGGGATATTGGCTCTCTGTTCATTCTGTGGAAAATTTTGCTGATGGGTAAAAACAGGATCTCGATAATTTATGGTAGGAATATCTTTAAAGATGGTTTAGACCATTCACATTTCAGTACCTCACTCTAAGCATTTACACTCTTCCTTCAAGTTAATCTCTAATAACTAAGCTGCTTAACTACCATTAACTTTATTGTTATTTTTATTTTTCTTCCTTTCTTCTCACTATCTAATGGATTGAACCTCCAACGTGGAGCATTGGGCATAGCTGAGCTAACTGCTGCCCCATTAAGCGAACAAGATGTGAAATGTTTTGGTTTTTATTTTATTGTTATTATTATTTTGCCCTTAATGTCGCCCAATGCCCAAAGGTGTATAAGGACCGTCTTTTTTATGTTACCTAACTCCTTCTATTTCATTGTTCTCAATGAAAGTGTTTTTTAATCTTAAAAAGAGGAGAGAAATAATGAACAGAATCTTTTTGGCGTAGTACTTCAAGGTTACTTTATTTGAAGTTTATGCCATAAAGTATATGCCATTGTTATATCGTTAATAATGGTGAATTGATTTCATCTCATGTTTCTCTCAGAAGGGAAATCCTCTTCTCAAACACATCAGGAATGCGAGATGGGCTTTTGCAGATGTAGTACCTGATTATTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGGTTCGAGTTTCATTCTCTCTATATATACTCTACTCATGGTATCAAAAGAAATAAATTTGAACTCTCTAGATTAAAATGCCTAGTATCCATATGAGGCTTGGTTTGTTTGAATTGTATGTAACACTGGCAATCGTAAACGAGAGTTTCTGAACTCTTTGCTTCTATAAAATATGGTTATATTTGCATATAAGAGTTCTAATATTGACAGGGACGGTCAGTGTTTTCCTTTAGCATTTGACTTTTAATTTTTTATATAAGAACACATCTTTAATTGAGAGAAATAAAAGACTGTACAAGGCATACAAAAAACGAGTCCACAAAGAACATTAACTACACGAACAAACCCAGTCCACCAAAATGAGATTTAGCTGATAAGTACAAAACATCTGATCAGCGGGAGTCTATAATAAGACTTAAACCTAATCAACTCCCAAAGCTCTTCTCAGGATCTCTTATCCCCCAACCAAATTCTCCACAAAATAGCGAAAAAGAACAACTACATTGCCACAAAACTCTTCCTTTATCCTGAAAAGAAGCGTTAGCAGCCTCTATTGAAAACCTAAGTAAACCCAAAGTCCTAAAGAGCCGACTCTAGAGAGAGACAGAAAAATTAAAATTCCAAATTAAAATTTTAGGGTCCTCCTCTTGCTACTTGCCAACACGCAGCACTAGAGGTGCTTTTGTATTTGATTTTATAACCTTTATGCTAGTTTTGAACTCTCGCGCCATCTTATCCATGGCAAAACATTATGCTATGCATCAGCCATCTTCTTAGTGCTTACTTCTTCCGTATGTTAGAATATGTCATTTATTAGATTAAGTCTTTTATGCAGTCTTCGGTATCATCTACTGCACCCAGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTCATTCTGTGCCATGTTGATGTGGTAAGAAACCATACTGGCTAGGGTTTTTCCCTTATCCTTTCTCTGTTTTCCTGATGAAGACTTCAAATAGTTAATGTTCGTTACCAAAGCCTTAGTCGCCTGTTGAAGTAATGGCATATTTTAGTTTATTTCAGGAAGATGTTGTTAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTGCTTCACGATTGTACCCTTCTTTGTGCTTGGAGGTAAGCATGATGTTCATTTGAAGTTGTTTTTGGCTGGCCTAGATTTGACGTTTACTGATGTGTACATGTGAAAGCAATATACTTTTAGAAGGATTGGTTGTGCAAATATTTAATTGTCAAGCATTTTAATGATGTCCATTGAAGATTTTGTTAACTACTTGGATTGGAAATGACTTCTTTTGTTGATAGATTTTCTATATTAAATCAGAAAGTGAATATTAGGATAGGAATGGGAACGTTTTGAGTATTCTGGTTGAGGTAAAGAGTAGCAAGCCCATGCCTGAAAATTGACTTTTAGATTTTATTTCTGCTTTTTATTAGTTTGGAGGAATGTGGTCGCTATTTGGAGACTATAAAAGTCTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCATATGGACACGGACTATCTGTCAAGGGTATTGATTGTCTAAAGTTTTTTCCCTATTGAACATTTATTTTGTTTCTGTGATATCAATATCGTGTGGACTTTTATTATATCAACTCTTAGCCATTTTGTCGAAAAACTCAAATCCACCACAACTGGTTTTATTTCCTTAGCTCTTAAAATATGTTCTGAACTAAAATTCTTGTTTTAATTGTAGCTAACACATGTCCTAACATCAGTTCGGCATGTTAATAAGACTGATGTGGTCACTCTTGGAACGACATTTGGGGTAAACCTTTGATGTATTTTTGCTAAGGTTCTTCCATTCTTGTCTTTTATGTCGTCTTTGGTGTAAAACTGCTAATTTGTTTTCTGTTGCAGTCTCTATCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAGTCCCTTTTCCAAAACAGGGCGCTTTCCCAAGTGTGTCCTTAGTTCTTGTTATACTCTTGTTTACTGGTTTCGTAAATTTCTTTTGAAAATATCCCATGTCCTTGATGTTATCAACAATACAATAACACGCATTTAATATGAGAAAATTTTCACTCATGAATATGATATCCTTCTTCTTAATGTTCTGTTTATGATCTTGATAGATTTAGATTGTTGATAATTCTATTCAAACCGGCATTATTCATCCTCCATACCTATCTCAATTTCTTTGTCAGTGAATGAGCTTATAGCATTTAGAAATTTAGATTGATGTTTAGTTTGCTTGCATTAAATGCTGTTATTCAATTCCTCTTACTCCTCAGGTAAGGCGGCTGTACGACACCTTTCATGAGCCATTCAAACGTGTCGTTTCAACCCACCCTGCTGTTCCAGAAACTCCAACCCAGATTAGTACCAAACCTCGGTCAAGCAATGAAGAACAAGATGTGGATGGGAAGAGAATAGAAGAAGATGGTAGCCAACACAAAAAGGAACCTAAATTAAATGTCAAATCAGCTCTTTCTGCTGCTTTTGCCAAATATGCTGACAAAATTGCTAAAAGTGGTAGCATTCCACAAGAAAAAGAAAAAGGAGAACCTGAAAGTAGCAACACCCAGTAATTTTTACATTGCTTCTGGCCATCCATCCAAATCCGTTCTAATATTAAGACCATCTGATGAGAAGTAGCAACTGCAGGTCTGCTTGTTCGTGTTGCTGTAGAGTATGATCACATGGCTACATCCTTCAGAACACAATTCAAACCTGCTCGTGTTGTGTTTAGAATGCTACTTTGCTGTCGTTTGGAACACAGGAGTGGAAGTGACTTTCAGTCGCTCGAAAATGACATATAAGTTATATTTGCTTTTTGTATCTGTTAGATGTAACTCTTTCTGGACAAACAACAAATAAGGTCAGTAATAAGCGTGGTTTTTTTAGACACAAGAAGGTTTCATCTGCTGATTTAGCCTCAAATTATTGTTGACTGAAGCAAAATTGGAATTTTCTTTTTATGTTTTTTTATTTTTTAGTCATCAAGTTCATAAGTTTGACTAGTGATTTGTTGTAGTTTAAGACTTGAAGGCCATTTGTTTTTATCTGCTGAGAAAGTGATGAACAAGCAGTTTTACTGCTTTTAGTTGGAAGGGAAATATGATTTTGGCATCCTTTTATTAATTACCTCTACAATATTTTATTTGGTTTTATTGAA

mRNA sequence

GGTTGGTGGTGAATCATTAACAGAGGTCTCATCCCTACAAAAGAATCTCACAAAAGCCCTCTGGACATCTCAATTTTCATAATCTGAAACAGCAGAAAGGGTAGAAGATTATGGAGGAAGGAAGCGCAGAAGACAACTTTCAGCAAACCCCTCACAAGAAGAGCAAGACCATTATCAAGATACCCTCATATCAAGAAGTCATCGATAGCTCACAGCCAAACTCACAATCCTTCTCCCAAGCCTTTGCCTTCCTCAAATCCTCCGAGTTTTACTCTCCTCCACCAAAACCACCATCTCCTTCCTCCTCCCAATCCTTGCCGCCTTCCAACATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTGCAGCTACTCCGGTTAATAGCTTGTCGGTGTCGAGTTCTGTTAGTCGCAATGCCATTCTTGTCAGCAATAGACAGAAGGGAAATCCTCTTCTCAAACACATCAGGAATGCGAGATGGGCTTTTGCAGATGTAGTACCTGATTATTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCACCCAGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTCATTCTGTGCCATGTTGATGTGGAAGATGTTGTTAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTGCTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAATGTGGTCGCTATTTGGAGACTATAAAAGTCTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCATATGGACACGGACTATCTGTCAAGGCTAACACATGTCCTAACATCAGTTCGGCATGTTAATAAGACTGATGTGGTCACTCTTGGAACGACATTTGGGTCTCTATCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAAGGCGGCTGTACGACACCTTTCATGAGCCATTCAAACGTGTCGTTTCAACCCACCCTGCTGTTCCAGAAACTCCAACCCAGATTAGTACCAAACCTCGGTCAAGCAATGAAGAACAAGATGTGGATGGGAAGAGAATAGAAGAAGATGGTAGCCAACACAAAAAGGAACCTAAATTAAATGTCAAATCAGCTCTTTCTGCTGCTTTTGCCAAATATGCTGACAAAATTGCTAAAAGTGGTAGCATTCCACAAGAAAAAGAAAAAGGAGAACCTGAAAGTAGCAACACCCAGTAATTTTTACATTGCTTCTGGCCATCCATCCAAATCCGTTCTAATATTAAGACCATCTGATGAGAAGTAGCAACTGCAGGTCTGCTTGTTCGTGTTGCTGTAGAGTATGATCACATGGCTACATCCTTCAGAACACAATTCAAACCTGCTCGTGTTGTGTTTAGAATGCTACTTTGCTGTCGTTTGGAACACAGGAGTGGAAGTGACTTTCAGTCGCTCGAAAATGACATATAAGTTATATTTGCTTTTTGTATCTGTTAGATGTAACTCTTTCTGGACAAACAACAAATAAGGTCAGTAATAAGCGTGGTTTTTTTAGACACAAGAAGGTTTCATCTGCTGATTTAGCCTCAAATTATTGTTGACTGAAGCAAAATTGGAATTTTCTTTTTATGTTTTTTTATTTTTTAGTCATCAAGTTCATAAGTTTGACTAGTGATTTGTTGTAGTTTAAGACTTGAAGGCCATTTGTTTTTATCTGCTGAGAAAGTGATGAACAAGCAGTTTTACTGCTTTTAGTTGGAAGGGAAATATGATTTTGGCATCCTTTTATTAATTACCTCTACAATATTTTATTTGGTTTTATTGAA

Coding sequence (CDS)

ATGGAGGAAGGAAGCGCAGAAGACAACTTTCAGCAAACCCCTCACAAGAAGAGCAAGACCATTATCAAGATACCCTCATATCAAGAAGTCATCGATAGCTCACAGCCAAACTCACAATCCTTCTCCCAAGCCTTTGCCTTCCTCAAATCCTCCGAGTTTTACTCTCCTCCACCAAAACCACCATCTCCTTCCTCCTCCCAATCCTTGCCGCCTTCCAACATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTGCAGCTACTCCGGTTAATAGCTTGTCGGTGTCGAGTTCTGTTAGTCGCAATGCCATTCTTGTCAGCAATAGACAGAAGGGAAATCCTCTTCTCAAACACATCAGGAATGCGAGATGGGCTTTTGCAGATGTAGTACCTGATTATTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCACCCAGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTCATTCTGTGCCATGTTGATGTGGAAGATGTTGTTAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTGCTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAATGTGGTCGCTATTTGGAGACTATAAAAGTCTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCATATGGACACGGACTATCTGTCAAGGCTAACACATGTCCTAACATCAGTTCGGCATGTTAATAAGACTGATGTGGTCACTCTTGGAACGACATTTGGGTCTCTATCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAAGGCGGCTGTACGACACCTTTCATGAGCCATTCAAACGTGTCGTTTCAACCCACCCTGCTGTTCCAGAAACTCCAACCCAGATTAGTACCAAACCTCGGTCAAGCAATGAAGAACAAGATGTGGATGGGAAGAGAATAGAAGAAGATGGTAGCCAACACAAAAAGGAACCTAAATTAAATGTCAAATCAGCTCTTTCTGCTGCTTTTGCCAAATATGCTGACAAAATTGCTAAAAGTGGTAGCATTCCACAAGAAAAAGAAAAAGGAGAACCTGAAAGTAGCAACACCCAGTAA

Protein sequence

MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYADKIAKSGSIPQEKEKGEPESSNTQ*

Homology

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BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot
Match: Q9MA98 (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-125
Identity = 244/403 (60.55%), Postives = 301/403 (74.69%), Query Frame = 0


Query: 2   EEGSAEDNFQQTPHKKSKT--IIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKS 61
           ++G    +  Q   +K KT  +I +PSYQEV++SSQ           SQSFSQAFAF+KS
Sbjct: 6   DDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKS 65

Query: 62  SEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRN 121
           S+ YSPPP P S ++S S P      P  + Q   +  ++S+S      S+  +++ +RN
Sbjct: 66  SDVYSPPP-PSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRN 125

Query: 122 AILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRE 181
           AILVS+RQKGNPLLKHIRN +W F+D++PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 126 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 185

Query: 182 LQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKP 241
           LQKNFKL V+LCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENKP
Sbjct: 186 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 245

Query: 242 ADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGE 301
           ADLIQG MDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGE
Sbjct: 246 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 305

Query: 302 RKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDV-DGKRIEEDGSQHKK- 361
           RKV+RLYDTFHEPFKR  S++P+V E P   +   +  N E+ V + +   ED  + KK 
Sbjct: 306 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKK 365

Query: 362 --EPKLNVKSALSAAFAKYADKIAKSGSIPQEKEKGEPESSNT 390
             EP+  VK+ALSA FA+Y+D+++K     +EK+      + T
Sbjct: 366 EPEPEKTVKTALSAVFARYSDRLSKKKEKQKEKDTTTASDAET 407

[Close]

BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot
Match: P07992 (DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.0e-61
Identity = 135/285 (47.37%), Postives = 176/285 (61.75%), Query Frame = 0


Query: 35  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTS 94
           QP+     + F      +   P    P   S+QSLP    S    P+   +   S     
Sbjct: 12  QPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTYAEYAISQPLEG 71

Query: 95  ASAATPVNS---------LSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYL 154
           A A  P  S          ++      N+I+VS RQ+GNP+LK +RN  W F DV+PDY+
Sbjct: 72  AGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYV 131

Query: 155 LGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALL 214
           LGQS+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  VDV+D  + L E+ K  +L
Sbjct: 132 LGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCIL 191

Query: 215 HDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVV 274
            DCTL+ AWS EE GRYLET K YE KPADL+   ++ D++SR+T  LT+V+ VNKTD  
Sbjct: 192 ADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQ 251

Query: 275 TLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV 308
           TL TTFGSL  ++ AS EDLA CPG+G +K RRL+D  HEPF +V
Sbjct: 252 TLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKV 296

[Close]

BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot
Match: P07903 (DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 3.9e-61
Identity = 126/253 (49.80%), Postives = 167/253 (66.01%), Query Frame = 0


Query: 60  PPSPSSSQSLPPSN-----ITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILV 119
           P  P++S  + P       IT P         + S  A+   P  S ++ +    N+I+V
Sbjct: 46  PTIPATSAHVAPQTYAEYAITQPPGGAGATVPTGSEPAAGENP--SQTLKTGAKSNSIIV 105

Query: 120 SNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKN 179
           S RQ+GNP+LK +RN  W F +V+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KN
Sbjct: 106 SPRQRGNPVLKFVRNVPWEFGEVIPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKN 165

Query: 180 FKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLI 239
           F LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+
Sbjct: 166 FALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLL 225

Query: 240 QGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVR 299
              ++ ++LSR T  LT+V+ VNKTD  TL  TFGSL  +  AS EDLA CPG+G +K R
Sbjct: 226 MEKLEQNFLSRATECLTTVKSVNKTDSQTLLATFGSLEQLFTASREDLALCPGLGPQKAR 285

Query: 300 RLYDTFHEPFKRV 308
           RL++  HEPF +V
Sbjct: 286 RLFEVLHEPFLKV 296

[Close]

BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot
Match: Q1LZ75 (DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-60
Identity = 131/285 (45.96%), Postives = 177/285 (62.11%), Query Frame = 0


Query: 35  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTS 94
           +P      + F      +   PP   P   S++SLP    S    P+   +   S     
Sbjct: 8   KPAGPPTRKKFLIPTDEDVVPPPGAKPLFRSTRSLPTVETSPPPGPQTYAEYALSGPPGG 67

Query: 95  ASAATPVN---------SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYL 154
           A A  PV          + +       N+I+VS RQ+GNP+L+ +RN  W F DV+PDY+
Sbjct: 68  AEATRPVGPEPLAEETPNQAPKPGAKSNSIIVSPRQRGNPVLRFVRNVPWEFGDVLPDYV 127

Query: 155 LGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALL 214
           LGQS+CAL+LSLRYH LHPDY++ R++ L K++ LRV+L  VDV+D  + L E+ K  +L
Sbjct: 128 LGQSTCALFLSLRYHNLHPDYIHQRLQSLGKSYALRVLLVQVDVKDPQQALKELAKMCIL 187

Query: 215 HDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVV 274
            DCTL+ AWS EE GRYLET K YE KPADL+   ++ D++SR+T  LT+V+ VNKTD  
Sbjct: 188 ADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQ 247

Query: 275 TLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV 308
           TL TTFGSL  ++ AS EDL+ CPG+G +K RRL+D FHEPF +V
Sbjct: 248 TLLTTFGSLEQLIAASREDLSLCPGLGPQKARRLFDVFHEPFLKV 292

[Close]

BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot
Match: Q06182 (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swi10 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-47
Identity = 93/200 (46.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 105 SSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYL 164
           S V+ ++ILV+ RQKGNPLL H+RN  W + D+VPD+++G   C+L+LSL+YH LHP+Y+
Sbjct: 36  SRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGTGICSLFLSLKYHHLHPEYI 95

Query: 165 YYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK 224
           Y RI +L K++ LR++L  VDVE+    + E+ KT++++  TL+ AWS EE  RYLET K
Sbjct: 96  YSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYK 155

Query: 225 VYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLAR 284
            YEN    LI     TDYLS++   LTS+R +NK+D ++L + FGSL   + AS ++L +
Sbjct: 156 AYENMSPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLLSKFGSLERALVASRDELEQ 215

Query: 285 CPGIGERKVRRLYDTFHEPF 305
             G G  KV R  +   +PF
Sbjct: 216 LEGWGPTKVNRFLEAVQQPF 235

[Close]

BLAST of CsGy6G002490 vs. NCBI nr
Match: XP_004138378.1 (DNA excision repair protein ERCC-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 746 bits (1925), Expect = 6.24e-271
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTP-HKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGSAEDNFQQTP HKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120
           PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240
           ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300

Query: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360
           FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS
Sbjct: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ
Sbjct: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ 391

[Close]

BLAST of CsGy6G002490 vs. NCBI nr
Match: XP_008463078.1 (PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo])

HSP 1 Score: 723 bits (1866), Expect = 5.89e-262
Identity = 375/390 (96.15%), Postives = 379/390 (97.18%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360
           HEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA
Sbjct: 301 HEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360

Query: 361 AFAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           AFAKYADKIAKS S+PQEKE GEPESSN Q
Sbjct: 361 AFAKYADKIAKSSSMPQEKEIGEPESSNVQ 390

[Close]

BLAST of CsGy6G002490 vs. NCBI nr
Match: TYK02347.1 (DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa])

HSP 1 Score: 717 bits (1852), Expect = 4.47e-259
Identity = 372/386 (96.37%), Postives = 376/386 (97.41%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360
           HEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA
Sbjct: 301 HEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360

Query: 361 AFAKYADKIAKSGSIPQEKEKGEPES 386
           AFAKYADKIAKS S+PQEKE GEPES
Sbjct: 361 AFAKYADKIAKSSSMPQEKEIGEPES 386

[Close]

BLAST of CsGy6G002490 vs. NCBI nr
Match: KAA0035007.1 (DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa])

HSP 1 Score: 713 bits (1840), Expect = 3.12e-257
Identity = 372/387 (96.12%), Postives = 376/387 (97.16%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV-RRLYDT 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV RRLYDT
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVVRRLYDT 300

Query: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360
           FHEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALS
Sbjct: 301 FHEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIAKSGSIPQEKEKGEPES 386
           AAFAKYADKIAKS S+PQEKE GEPES
Sbjct: 361 AAFAKYADKIAKSSSMPQEKEIGEPES 387

[Close]

BLAST of CsGy6G002490 vs. NCBI nr
Match: XP_038884592.1 (DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida] >XP_038884593.1 DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 665 bits (1716), Expect = 4.04e-239
Identity = 347/390 (88.97%), Postives = 362/390 (92.82%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEG+ E+N QQT HKKSKTIIKIPSYQEVI+SSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGNEEENLQQTAHKKSKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
            S SSSQSL  S ITNPRKNDQLDTSSSSTSAS  TP NS SV SSVS NAILVSNRQKG
Sbjct: 61  ASASSSQSLSASEITNPRKNDQLDTSSSSTSASTTTPNNSSSVPSSVSHNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKH+RN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHVRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360
           HEPFKR+VSTHP  PETPTQ +TKPRS +EEQDVD KR E DGSQHKKEP+LN+KSALSA
Sbjct: 301 HEPFKRIVSTHPGAPETPTQNNTKPRSMDEEQDVDEKRTE-DGSQHKKEPELNIKSALSA 360

Query: 361 AFAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           AFAKYADKI K+ S+P+ +E+GEPESSN Q
Sbjct: 361 AFAKYADKIGKNCSMPRGEERGEPESSNLQ 389

[Close]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL
Match: A0A0A0KDK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014860 PE=3 SV=1)

HSP 1 Score: 746 bits (1925), Expect = 3.02e-271
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTP-HKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGSAEDNFQQTP HKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120
           PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240
           ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300

Query: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360
           FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS
Sbjct: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ
Sbjct: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSNTQ 391

[Close]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL
Match: A0A1S3CIE0 (DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 SV=1)

HSP 1 Score: 723 bits (1866), Expect = 2.85e-262
Identity = 375/390 (96.15%), Postives = 379/390 (97.18%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360
           HEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA
Sbjct: 301 HEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360

Query: 361 AFAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           AFAKYADKIAKS S+PQEKE GEPESSN Q
Sbjct: 361 AFAKYADKIAKSSSMPQEKEIGEPESSNVQ 390

[Close]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL
Match: A0A5D3BSF5 (DNA excision repair protein ERCC-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00400 PE=3 SV=1)

HSP 1 Score: 717 bits (1852), Expect = 2.16e-259
Identity = 372/386 (96.37%), Postives = 376/386 (97.41%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360
           HEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA
Sbjct: 301 HEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALSA 360

Query: 361 AFAKYADKIAKSGSIPQEKEKGEPES 386
           AFAKYADKIAKS S+PQEKE GEPES
Sbjct: 361 AFAKYADKIAKSSSMPQEKEIGEPES 386

[Close]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL
Match: A0A5A7T0A2 (DNA excision repair protein ERCC-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G00490 PE=3 SV=1)

HSP 1 Score: 713 bits (1840), Expect = 1.51e-257
Identity = 372/387 (96.12%), Postives = 376/387 (97.16%), Query Frame = 0


Query: 1   MEEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKP 60
           MEEGSAE+NFQQTPHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKP
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 61  PSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKG 120
           PSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVNSLSVSSSVSRNAILVSNRQKG
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKG 120

Query: 121 NPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVI 180
           NPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+
Sbjct: 121 NPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV-RRLYDT 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV RRLYDT
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVVRRLYDT 300

Query: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360
           FHEPFKR+VSTHPAVPETPTQ STKPRS NEEQDVDGKRIEEDGSQHKKEPKLNVKSALS
Sbjct: 301 FHEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIAKSGSIPQEKEKGEPES 386
           AAFAKYADKIAKS S+PQEKE GEPES
Sbjct: 361 AAFAKYADKIAKSSSMPQEKEIGEPES 387

[Close]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL
Match: A0A6J1HED7 (DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462101 PE=3 SV=1)

HSP 1 Score: 636 bits (1640), Expect = 3.58e-227
Identity = 336/389 (86.38%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 2   EEGSAEDNFQQTPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPP 61
           ++G  E+N QQT HKK KTIIKIPSYQEVIDSSQP SQSFSQAFAFLKS+EFYSPPP+P 
Sbjct: 47  QQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPV 106

Query: 62  SPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKGN 121
             SSSQSLP S+ITNPRKNDQLDT  SSTSASAATP N LS SSSV+RNAILVSNRQ+GN
Sbjct: 107 PASSSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQRGN 166

Query: 122 PLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVIL 181
           PLLKHIRN RW FADVVPDYLLG SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+L
Sbjct: 167 PLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVL 226

Query: 182 CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTD 241
           CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTD
Sbjct: 227 CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTD 286

Query: 242 YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH 301
           YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFH
Sbjct: 287 YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFH 346

Query: 302 EPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAA 361
           EPFKRVVSTHP+V ETPTQ ST+PRS  EEQDVDGK  E D SQHKKEP+L++KSALSAA
Sbjct: 347 EPFKRVVSTHPSVLETPTQNSTEPRSIREEQDVDGKNTE-DASQHKKEPELSIKSALSAA 406

Query: 362 FAKYADKIAKSGSIPQEKEKGEPESSNTQ 390
           FAKY+ KI KS S P+ +EK EPE+SN+Q
Sbjct: 407 FAKYSAKIGKS-SKPEGEEK-EPENSNSQ 432

[Close]

BLAST of CsGy6G002490 vs. TAIR 10
Match: AT3G05210.1 (nucleotide repair protein, putative )

HSP 1 Score: 451.1 bits (1159), Expect = 9.4e-127
Identity = 244/403 (60.55%), Postives = 301/403 (74.69%), Query Frame = 0


Query: 2   EEGSAEDNFQQTPHKKSKT--IIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKS 61
           ++G    +  Q   +K KT  +I +PSYQEV++SSQ           SQSFSQAFAF+KS
Sbjct: 6   DDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKS 65

Query: 62  SEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRN 121
           S+ YSPPP P S ++S S P      P  + Q   +  ++S+S      S+  +++ +RN
Sbjct: 66  SDVYSPPP-PSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRN 125

Query: 122 AILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRE 181
           AILVS+RQKGNPLLKHIRN +W F+D++PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 126 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 185

Query: 182 LQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKP 241
           LQKNFKL V+LCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENKP
Sbjct: 186 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 245

Query: 242 ADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGE 301
           ADLIQG MDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGE
Sbjct: 246 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 305

Query: 302 RKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDV-DGKRIEEDGSQHKK- 361
           RKV+RLYDTFHEPFKR  S++P+V E P   +   +  N E+ V + +   ED  + KK 
Sbjct: 306 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKK 365

Query: 362 --EPKLNVKSALSAAFAKYADKIAKSGSIPQEKEKGEPESSNT 390
             EP+  VK+ALSA FA+Y+D+++K     +EK+      + T
Sbjct: 366 EPEPEKTVKTALSAVFARYSDRLSKKKEKQKEKDTTTASDAET 407

The following BLAST results are available for this feature:

BLAST of CsGy6G002490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA98	1.3e-125	60.55	DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2...	[more]
P07992	3.0e-61	47.37	DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1	[more]
P07903	3.9e-61	49.80	DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2	[more]
Q1LZ75	3.3e-60	45.96	DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1	[more]
Q06182	1.9e-47	46.50	Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of CsGy6G002490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138378.1	6.24e-271	99.49	DNA excision repair protein ERCC-1 isoform X1 [Cucumis sativus]	[more]
XP_008463078.1	5.89e-262	96.15	PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo]	[more]
TYK02347.1	4.47e-259	96.37	DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]	[more]
KAA0035007.1	3.12e-257	96.12	DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]	[more]
XP_038884592.1	4.04e-239	88.97	DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida] >XP_038884593....	[more]

BLAST of CsGy6G002490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDK6	3.02e-271	99.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014860 PE=3 SV=1	[more]
A0A1S3CIE0	2.85e-262	96.15	DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 ...	[more]
A0A5D3BSF5	2.16e-259	96.37	DNA excision repair protein ERCC-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7T0A2	1.51e-257	96.12	DNA excision repair protein ERCC-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1HED7	3.58e-227	86.38	DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsGy6G002490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05210.1	9.4e-127	60.55	nucleotide repair protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 225..312 e-value: 3.6E-33 score: 115.1
None	No IPR available	GENE3D	3.40.50.10130		coord: 110..224 e-value: 4.5E-49 score: 167.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..95
IPR004579	ERCC1/RAD10/SWI10 family	PFAM	PF03834	Rad10	coord: 112..224 e-value: 1.7E-43 score: 147.3
IPR004579	ERCC1/RAD10/SWI10 family	TIGRFAM	TIGR00597	TIGR00597	coord: 110..221 e-value: 1.7E-43 score: 145.1
IPR004579	ERCC1/RAD10/SWI10 family	PANTHER	PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	coord: 22..311
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 233..304
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 110..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G002490.2	CsGy6G002490.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000710	meiotic mismatch repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion
biological_process	GO:0070914	UV-damage excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0070522	ERCC4-ERCC1 complex
cellular_component	GO:0000110	nucleotide-excision repair factor 1 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003697	single-stranded DNA binding