CsGy6G002250 (gene) Cucumber (Gy14) v2.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGACTACCACCCTATGTGATTGGGGAAAAGGTGAAGTCCATCTAATCAAAAGAATCAGACGGTAAAAAATTATTCCCGGTTGTTATGGTGGCTGGAACCGAATCCACCGTATAAAAGTCTTCCTAATTCTTCTATTAGGTTTGTCATTGGAATTGGAAAAACAATTGAGAGAAAGAAAAATGGCAGGTGAATCGTCTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAGGCCGCCGCCGGCTGGGGTGTCGCCGCCGCCACAACTGCTCTCTGGGTCATTCAGGTTTTCACCTTTTCTAAATCCTTTGATCTATGCATACTTTTGTTTCTGATTTCCACAGATTTATGAAGTGAATCTTTTGACTTCCTGTGTTGAATTAAAGGATGCATCGATTTTCTTGAGAATTGATTCTTGTTTCTGCTTTATTACCCTTGCCACCTTAATGGTTTCTATTTCAAGTTTTGGACGACCTACTTTGGCGTATTCGGATCTCTATTTTTTCTCCTGCCTTGATATAGTGATTACACAGTTGAGATCTGAAAGAAATTTATTCCTTTTGAATTATGGTGTCTACGAACATACGTATTCCCCGTTGACGAGGAGCCTAGATATTCATTTCAGTTCTCTTTTACTATTATCTTCTTTTTGGTTGTTGATCGAGCACAAAATGATACTCTTGCCCATCTTTGGAAGATAACTGGTAGAACTCTTGAAATATTAAAAAATGGAGTGTAATAATTCTTTTCTCACTCTATATTTGTTTTGAACGAAGGACACAATTCTACAACCTTTAGAACAGTTCTTCTTCAAGTTATCTTTATTTATATGCAGCACCATGTTAGACATTGAATCTCACAGGTTTCTAAAAAGTTGTAGTAGTTCATTATATGTGGCTCCATGTCCTGCCGTCCTCATGATCACAACTCTGGTTCCACATTGTAAGTTTTGTTTACTTCAGATTCCAATCCAAGTTCAGCTTTCAGTGTTATGGAGCTTTTATCCATCAAAACCCTACCTCAGCAGAAGTTTTGATCCTCTATCCTTGCTATTTCTACACTCTTTTCCAAGTTCCGTAATTTTATCGATATAGATGGCTTCATTTGTTGGATTTAAACCATTAGTGAACTTTCTAACTGTACCTGCTGCAAAATTTCCATCGAAGACACTGCCAACCAAAATCTTAATCTAACTTCCATCAATATTCTTAAACAGTCCTGGGGTATGGTAAAAAACTTTGTTGTTTGCACCTTCTACCCAAGATTCTGTCCGTTAGTCCACTGAACAAGGTGAGAGGCTTACCACAAAAGTTCACAAGTGATGTCTTGAACTCCTAGGATCCGGCATTCATTTTGCAGTGAAGTATTGTTCTGCTCTAAACGTATTCTCCTCTCAATTGCTACTTTTTATTGAAAGACCTCTCACAATGTTGGTTGTTTCTTTCTAGAACAAGCCACTCCACTGATTGACGACCACACTTGGATTCTACTACTGCAAAACTCAAAATCGATTTCCCTTAATCGCCCCCCCAATCACATGTTTCGTGCACTTCTTTCTAGGAATCCCCAAGATTGAAGTGCTCCAATGTCACAGCTGATAGATCCCTTGTCATTTTATTTAACCAATTTGATTGTGATGGTATGGGGTTTTATTAGCTCAGCCCTCTTTCTCTGCTTCTCATATTCTCTTTCTACATGCTTTGTAAACGTCCCCAACTCTTCTTCCTTAACTAACGGCAATTACATCATTTCCTCTCTTTTTCTACTGATTAGGATCACCTGTTTTTTTTCTTGTTTTCCCAACTAAACCATAATGGACTTGTGTTCTTTGCTATGTGTTTCTTGCAAATTATTGATTGGGAAAAACTGTTACTTTTTCGCCATCTACAAGTTTTTGGGTTCCAGATGTGCTCCATTACCTTTGATAAGGAGAATGCATTATCCTACCTTGGCTGGCTTTTTATACATTGTTATTTTTGTAAATTTTTCTGCAAATAAATGGATAGAGATTTGATCCTACAACCGACATAAGGTGTAAGAATGTAAGTAGAGTCTGTATGATCGCATCTTTCAGCTTACCGCTTAGTGGGGATTGATCGAGCAGACTCTTACCTTGATCACTTGCTATGCTTATGTTGGTTAAGGTTAACTTTCAGTACTTCTGGTCTTTTTACTATGACTTTTTGTATCCAATATAAGATGCTTAACCTCTATAACCCCGAAAATGCTCTCTGCCTTGTAGTAGAAAAAAATTAATTATGTACATTTCCCCTTAATGTTTGGTGAGGCTGCAAACCAACCTAAATTGTTTGAGTTGTTAAAGTATCATTGCTTGCCTAAACAGTTTGTTCCAATTAATTTTGTACTATATGCTTGAAATGTTATTAGTAACTATACTTGTAGAAAATGAACTGTATATGGTCTTTCCTCTTTTTGAGGCACCTCTGTGGTGCATTAATAGGATGTTTAAACGAATCTAATGACTTATTTTTCTCTTTTGGACTCTTTGCAGCCATTTGACTGGATCAAGAAAACGTTCTTCGAGAAGCCACAAGAGAAATGAATTGTTATTTTGTGAAGACTCACCCCAGTTTTTGTTAATAAAGTATCAGTTGATTGCTTTGCCGCAAATGGGTAAACTGCAGAGTTCATTGGAATAACATGTTTTGTAATAGAATCTCTTTTGATTAAAATTGAGTTCTTCCGTTTGAAATTTCAGCGATAACCATTTGAACTTTTGTTTTTGTGTTTTTTTATCCCTTTTAGATTAAGGTTATACACGTCACTTACATCCATCAGTTTCTATATGTTGTCATGTTTTAAGAGCAAGCTATGTTTGGACAACTAAAAAGAAAATGGTTTTTTTTTTGTGTTTAGAATTTTACTGATTGTTCAGGTCTTTCTTAAGTTCATATTTAAAAAACTAAAACAAAACTGTTGTCTAAGGGACTTACAAGTTTGGTTGATACTCGTTCTTCCCCCCTACTCCATTTTCCAGGATGTTTTCTTTGGTTAATTTGTTACTTGGGTCATAGGCATTTGAGGGAGAAGATTCAAACTTCTATGAAATATTAAGTTTCACGAATTTCATTTTAGTAATGTTTTGTCCTTATAAATCCAACTCTTTCTCAAGGAAATTATTATTCTCTTACAACATACCCTTTCTTTTATCCAGTAACATTTTCTAAACGTTGATAATATAGCCTATGAAACATCAATTTTTTAACATCTTTGAAGCTAGATAATATAGCTTATAAAATAAATAAATTAATAACTTAACATTGACTAGAAGACAATAAATTAATTAAATTATTTGTTAGAGTATTATAGTTATATGATCTAATGTTCTGTATTAAAACAAGTAGATATCAAGCTAGGAATGTGAAAACATCTTGCCATCTAATTTTGTTTCTTCTTTTTTTGTGACATAGTCTATGATTTTTGTTTCCGAAGCTATTCCTTTAACATTCTTTAATTAGTATCCTTAACACTAATTTTTAAGCAATAGGTTTATATTGACTACCACCCTATGTGATTGGGGAAAAGGTGAAGTCCATCTAATCAAAAGAATCAGACGGTAAAAAATTATTCCCGGTTGTTATGGTGGCTGGAACCGAATCCACCGTATAAAAGTCTTCCTAATTCTTCTATTAGGTTTGTCATTGGAATTGGAAAAACAATTGAGAGAAAGAAAAATGGCAGGTGAATCGTCTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAGGCCGCCGCCGGCTGGGGTGTCGCCGCCGCCACAACTGCTCTCTGGGTCATTCAGCCATTTGACTGGATCAAGAAAACGTTCTTCGAGAAGCCACAAGAGAAATGAATTGTTATTTTGTGAAGACTCACCCCAGTTTTTGTTAATAAAGTATCAGTTGATTGCTTTGCCGCAAATGGGTAAACTGCAGAGTTCATTGGAATAACATGTTTTGTAATAGAATCTCTTTTGATTAAAATTGAGTTCTTCCGTTTGAAATTTCAGCGATAACCATTTGAACTTTTGTTTTTGTGTTTTTTTATCCCTTTTAGATTAAGGTTATACACGTCACTTACATCCATCAGTTTCTATATGTTGTCATGTTTTAAGAGCAAGCTATGTTTGGACAACTAAAAAGAAAATGGTTTTTTTTTTGTGTTTAGAATTTTACTGATTGTTCAGGTCTTTCTTAAGTTCATATTTAAAAAACTAAAACAAAACTGTTGTCTAAGGGACTTACAAGTTTGGTTGATACTCGTTCTTCCCCCCTACTCCATTTTCCAGGATGTTTTCTTTGGTTAATTTGTTACTTGGGTCATAGGCATTTGAGGGAGAAGATTCAAACTTCTATGAAATATTAAGTTTCACGAATTTCATTTTAGTAATGTTTTGTCCTTATAAATCCAACTCTTTCTCAAGGAAATTATTATTCTCTTACAACATACCCTTTCTTTTATCCAGTAACATTTTCTAAACGTTGATAATATAGCCTATGAAACATCAATTTTTTAACATCTTTGAAGCTAGATAATATAGCTTATAAAATAAATAAATTAATAACTTAACATTGACTAGAAGACAATAAATTAATTAAATTATTTGTTAGAGTATTATAGTTATATGATCTAATGTTCTGTATTAAAACAAGTAGATATCAAGCTAGGAATGTGAAAACATCTTGCCATCTAATTTTGTTTCTTCTTTTTTTGTGACATAGTCTATGATTTTTGTTTCCGAAGCTATTCCTTTAACATTCTTTAATTAGTATCCTTAACACTAATTTTTAAGCAATAGGTTTAT ATGGCAGGTGAATCGTCTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAGGCCGCCGCCGGCTGGGGTGTCGCCGCCGCCACAACTGCTCTCTGGGTCATTCAGCCATTTGACTGGATCAAGAAAACGTTCTTCGAGAAGCCACAAGAGAAATGA MAGESSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDWIKKTFFEKPQEK* Homology
BLAST of CsGy6G002250 vs. ExPASy Swiss-Prot
Match: P48505 (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 9.1e-15 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy Swiss-Prot
Match: Q94K78 (Cytochrome b-c1 complex subunit 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRY PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.5e-12 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of CsGy6G002250 vs. NCBI nr
Match: KAG6578485.1 (hypothetical protein SDJN03_22933, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (288), Expect = 7.24e-31 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsGy6G002250 vs. NCBI nr
Match: KAF3433259.1 (hypothetical protein FNV43_RR24361 [Rhamnella rubrinervis]) HSP 1 Score: 95.1 bits (235), Expect = 1.01e-23 Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of CsGy6G002250 vs. NCBI nr
Match: ABK93367.1 (unknown [Populus trichocarpa] >ABK93644.1 unknown [Populus trichocarpa] >ABK95450.1 unknown [Populus trichocarpa] >ABK96046.1 unknown [Populus trichocarpa] >PNS90741.1 hypothetical protein POPTR_019G059500 [Populus trichocarpa]) HSP 1 Score: 92.4 bits (228), Expect = 4.08e-23 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of CsGy6G002250 vs. NCBI nr
Match: KAB2026486.1 (hypothetical protein ES319_D06G222600v1 [Gossypium barbadense] >KAG4143421.1 hypothetical protein ERO13_D06G187000v2 [Gossypium hirsutum] >KJB67953.1 hypothetical protein B456_010G219300 [Gossypium raimondii] >TYG66033.1 hypothetical protein ES288_D06G235200v1 [Gossypium darwinii] >TYH68160.1 hypothetical protein ES332_D06G239100v1 [Gossypium tomentosum] >TYI78599.1 hypothetical protein E1A91_D06G224000v1 [Gossypium mustelinum]) HSP 1 Score: 90.9 bits (224), Expect = 1.58e-22 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsGy6G002250 vs. NCBI nr
Match: KAB2078920.1 (hypothetical protein ES319_A06G195400v1 [Gossypium barbadense] >KAG4196580.1 hypothetical protein ERO13_A06G180100v2 [Gossypium hirsutum] >TYH14430.1 hypothetical protein ES288_A06G220000v1 [Gossypium darwinii] >TYI24175.1 hypothetical protein ES332_A06G215300v1 [Gossypium tomentosum] >TYJ31418.1 hypothetical protein E1A91_A06G196600v1 [Gossypium mustelinum]) HSP 1 Score: 90.5 bits (223), Expect = 2.25e-22 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy TrEMBL
Match: A9PAG4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G059500 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.97e-23 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy TrEMBL
Match: A0A0D2SX41 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G219300 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.66e-23 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy TrEMBL
Match: A0A5D2KMT9 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D06G239100v1 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.66e-23 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy TrEMBL
Match: A0A5J5R5T9 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D06G222600v1 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.66e-23 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsGy6G002250 vs. ExPASy TrEMBL
Match: A0A5D2CCX4 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D06G235200v1 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.66e-23 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsGy6G002250 vs. TAIR 10
Match: AT2G40765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 3.9e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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