CsGy6G002135 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G002135
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 1538792 .. 1539293 (+)
RNA-Seq Expression	CsGy6G002135
Synteny	CsGy6G002135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCGTATGCAAAAGAAGAATAATTGAGCTAACTCGAAATTACAACTCAGTGAAGCCTTTTCTTTTTCCTCTTTTTGCTCTGCGAGCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA

mRNA sequence

ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA

Coding sequence (CDS)

ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA

Protein sequence

MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQSTKYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENRFHIMNSSSKTPTHILFKFP*

Homology

[Close]

BLAST of CsGy6G002135 vs. NCBI nr
Match: KGN45826.1 (hypothetical protein Csa_004802 [Cucumis sativus])

HSP 1 Score: 287 bits (735), Expect = 6.34e-98
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQST 60
           MSARFNMKMMGHCNRQILIGAFNRNPRSESKF STPSPHHNSLNQPIRFHSSPNFNCQST
Sbjct: 1   MSARFNMKMMGHCNRQILIGAFNRNPRSESKFRSTPSPHHNSLNQPIRFHSSPNFNCQST 60

Query: 61  KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
           KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR
Sbjct: 61  KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120

Query: 121 FHIMNSSSKTPTHILFKFP 139
           FHIMNSSSKTPTHILFKFP
Sbjct: 121 FHIMNSSSKTPTHILFKFP 139

[Close]

BLAST of CsGy6G002135 vs. ExPASy TrEMBL
Match: A0A0A0KDG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014470 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 3.07e-98
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQST 60
           MSARFNMKMMGHCNRQILIGAFNRNPRSESKF STPSPHHNSLNQPIRFHSSPNFNCQST
Sbjct: 1   MSARFNMKMMGHCNRQILIGAFNRNPRSESKFRSTPSPHHNSLNQPIRFHSSPNFNCQST 60

Query: 61  KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
           KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR
Sbjct: 61  KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120

Query: 121 FHIMNSSSKTPTHILFKFP 139
           FHIMNSSSKTPTHILFKFP
Sbjct: 121 FHIMNSSSKTPTHILFKFP 139

The following BLAST results are available for this feature:

BLAST of CsGy6G002135 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G002135 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45826.1	6.34e-98	99.28	hypothetical protein Csa_004802 [Cucumis sativus]	[more]

BLAST of CsGy6G002135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDG2	3.07e-98	99.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014470 PE=4 SV=1	[more]

BLAST of CsGy6G002135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G002135.1	CsGy6G002135.1	mRNA