CsGy6G001870 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G001870
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ethylene-responsive transcription factor ABI4
Location	Gy14Chr6: 1324357 .. 1325274 (-)
RNA-Seq Expression	CsGy6G001870
Synteny	CsGy6G001870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

mRNA sequence

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Coding sequence (CDS)

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Protein sequence

MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFFDF*

Homology

[Close]

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot
Match: A0MES8 (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN=ABI4 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 6.4e-35
Identity = 95/143 (66.43%), Postives = 118/143 (82.52%), Query Frame = 0


Query: 23  HSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAE 82
           H+    ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRSWGKWVAE
Sbjct: 10  HNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAE 69

Query: 83  IREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSS 142
           IREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP++  SSS+S S++S
Sbjct: 70  IREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAAS 129

Query: 143 SSSRSSSST-SLRPLLPRPALSS 165
           S S SSSST +LRPLLPRPA ++
Sbjct: 130 SPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot
Match: C7J2Z1 (Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX=39947 GN=ABI4 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 117/289 (40.48%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 21  LDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRK--GKGGPDNNKFRYRGVRQRSWGK 80
           ++ S  + +  +P++   + SS        G  K+K  GKGGP+N KFRYRGVRQRSWGK
Sbjct: 1   MEPSDDACTVAAPAAETAASSSGAGGGGGGGRTKKKAAGKGGPENGKFRYRGVRQRSWGK 60

Query: 81  WVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSS 140
           WVAEIREPRKR+RKWLGTF+TAEDAARAYDRAA++LYG RA LNL +  P      S+++
Sbjct: 61  WVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLNLTAPPPLPPPPPSSAA 120

Query: 141 SSSSSSSRSSSSTS---LRPLLPRPA-LSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSL 200
           ++++SSS ++SSTS   LRPLLPRP  L   F        L L P P       PPPP  
Sbjct: 121 AAAASSSSAASSTSAPPLRPLLPRPPHLHPAFHHQPFHHHL-LQPQP-------PPPPPP 180

Query: 201 IYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLL 260
           +Y       Y A  +        TS+ TT T + PP    A P++   + + +    T  
Sbjct: 181 LY-------YAATAS--------TSTVTTTTTAPPPQLAAAAPAAVLVAAAVSSTAETQA 240

Query: 261 LSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPS-LWDYHDPFF 303
           + +  P   +            A G+   D  ++DY  + LW   DP+F
Sbjct: 241 VVATAPEDAASAAAAAAAEEEAAWGFHGGD--EEDYAAALLWSEPDPWF 264

[Close]

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot
Match: Q9SVX5 (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=3702 GN=DREB2F PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 116 GSRAQLNLQSTSPNNNYSSSNS 138
           G  A LNL     N   S SNS
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot
Match: O82132 (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-16
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           KGKGGP+N++  +RGVRQR WGKWVAEIREP + +R WLGTF TA++AA AYD AA  +Y
Sbjct: 67  KGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMY 126

Query: 116 GSRAQLNLQSTSPNNNYSSSNSSSSSS 143
           G  A+LN     P ++ S   S+SS S
Sbjct: 127 GPLARLNF----PRSDASEVTSTSSQS 149

[Close]

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot
Match: Q9LQZ2 (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=3702 GN=DREB2D PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-15
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGPDN    Y+GVRQR+WGKWVAEIREP +  R WLGTF T+ +AA AYD AA  LY
Sbjct: 30  RGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLY 89

Query: 116 GSRAQLNLQS---TSPNNNYSSSNSSSSSSSSSRSSSSTSLRP 156
           G  A LNL     + P    S ++ ++ SS++   SSS S  P
Sbjct: 90  GPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESP 132

[Close]

BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_004138561.1 (ethylene-responsive transcription factor ABI4 [Cucumis sativus] >KGN45797.1 hypothetical protein Csa_005321 [Cucumis sativus])

HSP 1 Score: 556 bits (1433), Expect = 7.90e-199
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60

Query: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120
           PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ
Sbjct: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120

Query: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180
           LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS
Sbjct: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180

Query: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240
           PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP
Sbjct: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240

Query: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300
           TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP
Sbjct: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300

Query: 301 FFFDF 305
           FFFDF
Sbjct: 301 FFFDF 305

[Close]

BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_008441640.1 (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo])

HSP 1 Score: 521 bits (1341), Expect = 9.19e-185
Identity = 293/311 (94.21%), Postives = 297/311 (95.50%), Query Frame = 0


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNN------NNGARK 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPS  SPSPSSSNPSDSSPNNNNN      NNGARK
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPS--SPSPSSSNPSDSSPNNNNNINNNNNNNGARK 60

Query: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120
           RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL
Sbjct: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120

Query: 121 YGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASS 180
           YGSRAQLNLQSTSPNNNYSSSNSSSSSSSS RSSSSTSLRPLLPRPALSSTFSFSSMASS
Sbjct: 121 YGSRAQLNLQSTSPNNNYSSSNSSSSSSSS-RSSSSTSLRPLLPRPALSSTFSFSSMASS 180

Query: 181 LPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTI 240
           LPLMPSPQS+TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTTTVTN TPPIST 
Sbjct: 181 LPLMPSPQSYTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVTNCTPPISTT 240

Query: 241 ATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSL 300
           ATPSSPTTSYSQNPNNPTLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDYLPSL
Sbjct: 241 ATPSSPTTSYSQNPNNPTLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDYLPSL 300

Query: 301 WDYHDPFFFDF 305
           WDYHDPFFFDF
Sbjct: 301 WDYHDPFFFDF 308

[Close]

BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_022959999.1 (ethylene-responsive transcription factor ABI4 [Cucurbita moschata])

HSP 1 Score: 294 bits (752), Expect = 4.61e-95
Identity = 211/338 (62.43%), Postives = 243/338 (71.89%), Query Frame = 0


Query: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNP----------SDSSPNNNNNNNGAR 63
           DHSPSSS  H      P DH S S SSPSP  ++P          S+++P++    NGAR
Sbjct: 3   DHSPSSSFPH-----PPRDHPSSSSSSPSPDPNSPLLPPPNPPPPSNTTPSSPTPTNGAR 62

Query: 64  KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII 123
           KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII
Sbjct: 63  KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII 122

Query: 124 LYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMAS 183
           LYGSRAQLNLQ+ SPN+  SSS+ SSSS S+SRS++  +LRPLLPRPA ++ FSFSSMAS
Sbjct: 123 LYGSRAQLNLQAASPNS--SSSSHSSSSQSNSRSNNLQTLRPLLPRPAAAA-FSFSSMAS 182

Query: 184 SLPLMPSPQSFTA-----------IYPPPP-SLIYPNLLHNQYPAQVTQHP------THE 243
           SLP+M S QS ++           +YP P  +L+ PNL+H QYP Q+TQHP      ++E
Sbjct: 183 SLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHAFSAPSNE 242

Query: 244 IITSSTTTVTNSTPPISTIATPSSP-TTSYSQNPNNPTLLLSSPL--------PPLPSDL 303
           I   ST+TVT S      IATPS P TTSY QNPN   LL++SP         PPL SDL
Sbjct: 243 I--PSTSTVTTS------IATPSPPSTTSYHQNPNP--LLVASPQINPSPVAPPPLVSDL 302

[Close]

BLAST of CsGy6G001870 vs. NCBI nr
Match: KAG7033291.1 (Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (746), Expect = 4.83e-94
Identity = 211/345 (61.16%), Postives = 244/345 (70.72%), Query Frame = 0


Query: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNP--------------SDSSPNNNNNN 63
           DHSPSSS  H      P DH S S SSPSP  ++P              S+++P++    
Sbjct: 3   DHSPSSSFPH-----PPRDHPSSSSSSPSPDPNSPLLPPPNPPPPPPPPSNTTPSSPTPT 62

Query: 64  NGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDR 123
           NGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDR
Sbjct: 63  NGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDR 122

Query: 124 AAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSST---F 183
           AAIILYGSRAQLNLQ++SPN+  SSS+ SSSS S+SRS++  +LRPLLPRPA ++    F
Sbjct: 123 AAIILYGSRAQLNLQASSPNS--SSSSHSSSSQSNSRSNNLQTLRPLLPRPAAATAAAAF 182

Query: 184 SFSSMASSLPLMPSPQSFTA-----------IYPPPP-SLIYPNLLHNQYPAQVTQHP-- 243
           SFSSMASSLP+M S QS ++           +YP P  +L+ PNL+H QYP Q+TQHP  
Sbjct: 183 SFSSMASSLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHA 242

Query: 244 ----THEIITSSTTTVTNSTPPISTIATPSSP-TTSYSQNPNNPTLLLSSPL-------- 303
               ++EI   ST+TVT S      IATPS P TTSY QNPN   LL++SP         
Sbjct: 243 FSSPSNEI--PSTSTVTTS------IATPSPPSTTSYHQNPNP--LLVASPQINPTPVAP 302

[Close]

BLAST of CsGy6G001870 vs. NCBI nr
Match: KAG6602610.1 (Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291 bits (745), Expect = 7.07e-94
Identity = 211/346 (60.98%), Postives = 244/346 (70.52%), Query Frame = 0


Query: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNP---------------SDSSPNNNNN 63
           DHSPSSS  H      P DH S S SSPSP  ++P               S+++P++   
Sbjct: 3   DHSPSSSFPH-----PPRDHPSSSSSSPSPDPNSPLLPPPNPPPPPPPPPSNTTPSSPTP 62

Query: 64  NNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYD 123
            NGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYD
Sbjct: 63  TNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYD 122

Query: 124 RAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSST--- 183
           RAAIILYGSRAQLNLQ++SPN+  SSS+ SSSS S+SRS++  +LRPLLPRPA ++    
Sbjct: 123 RAAIILYGSRAQLNLQASSPNS--SSSSHSSSSQSNSRSNNLQTLRPLLPRPAAATAAAA 182

Query: 184 FSFSSMASSLPLMPSPQSFTA-----------IYPPPP-SLIYPNLLHNQYPAQVTQHP- 243
           FSFSSMASSLP+M S QS ++           +YP P  +L+ PNL+H QYP Q+TQHP 
Sbjct: 183 FSFSSMASSLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPH 242

Query: 244 -----THEIITSSTTTVTNSTPPISTIATPSSP-TTSYSQNPNNPTLLLSSPL------- 303
                ++EI   ST+TVT S      IATPS P TTSY QNPN   LL++SP        
Sbjct: 243 AFSSPSNEI--PSTSTVTTS------IATPSPPSTTSYHQNPNP--LLVASPQINPTPVA 302

[Close]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL
Match: A0A0A0KBN1 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=4 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 3.83e-199
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60

Query: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120
           PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ
Sbjct: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120

Query: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180
           LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS
Sbjct: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180

Query: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240
           PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP
Sbjct: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240

Query: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300
           TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP
Sbjct: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300

Query: 301 FFFDF 305
           FFFDF
Sbjct: 301 FFFDF 305

[Close]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL
Match: A0A1S3B3F1 (ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC103485721 PE=4 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 4.45e-185
Identity = 293/311 (94.21%), Postives = 297/311 (95.50%), Query Frame = 0


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNN------NNGARK 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPS  SPSPSSSNPSDSSPNNNNN      NNGARK
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPS--SPSPSSSNPSDSSPNNNNNINNNNNNNGARK 60

Query: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120
           RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL
Sbjct: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120

Query: 121 YGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASS 180
           YGSRAQLNLQSTSPNNNYSSSNSSSSSSSS RSSSSTSLRPLLPRPALSSTFSFSSMASS
Sbjct: 121 YGSRAQLNLQSTSPNNNYSSSNSSSSSSSS-RSSSSTSLRPLLPRPALSSTFSFSSMASS 180

Query: 181 LPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTI 240
           LPLMPSPQS+TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTTTVTN TPPIST 
Sbjct: 181 LPLMPSPQSYTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVTNCTPPISTT 240

Query: 241 ATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSL 300
           ATPSSPTTSYSQNPNNPTLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDYLPSL
Sbjct: 241 ATPSSPTTSYSQNPNNPTLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDYLPSL 300

Query: 301 WDYHDPFFFDF 305
           WDYHDPFFFDF
Sbjct: 301 WDYHDPFFFDF 308

[Close]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL
Match: A0A6J1H9N9 (ethylene-responsive transcription factor ABI4 OS=Cucurbita moschata OX=3662 GN=LOC111460883 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 2.23e-95
Identity = 211/338 (62.43%), Postives = 243/338 (71.89%), Query Frame = 0


Query: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNP----------SDSSPNNNNNNNGAR 63
           DHSPSSS  H      P DH S S SSPSP  ++P          S+++P++    NGAR
Sbjct: 3   DHSPSSSFPH-----PPRDHPSSSSSSPSPDPNSPLLPPPNPPPPSNTTPSSPTPTNGAR 62

Query: 64  KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII 123
           KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII
Sbjct: 63  KRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAII 122

Query: 124 LYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMAS 183
           LYGSRAQLNLQ+ SPN+  SSS+ SSSS S+SRS++  +LRPLLPRPA ++ FSFSSMAS
Sbjct: 123 LYGSRAQLNLQAASPNS--SSSSHSSSSQSNSRSNNLQTLRPLLPRPAAAA-FSFSSMAS 182

Query: 184 SLPLMPSPQSFTA-----------IYPPPP-SLIYPNLLHNQYPAQVTQHP------THE 243
           SLP+M S QS ++           +YP P  +L+ PNL+H QYP Q+TQHP      ++E
Sbjct: 183 SLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHAFSAPSNE 242

Query: 244 IITSSTTTVTNSTPPISTIATPSSP-TTSYSQNPNNPTLLLSSPL--------PPLPSDL 303
           I   ST+TVT S      IATPS P TTSY QNPN   LL++SP         PPL SDL
Sbjct: 243 I--PSTSTVTTS------IATPSPPSTTSYHQNPNP--LLVASPQINPSPVAPPPLVSDL 302

[Close]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL
Match: A0A6J1JQI1 (ethylene-responsive transcription factor ABI4 OS=Cucurbita maxima OX=3661 GN=LOC111487424 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 4.26e-94
Identity = 211/348 (60.63%), Postives = 238/348 (68.39%), Query Frame = 0


Query: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPS---------------------SSNPSDSS 63
           DHSPSSS  H      P DH S S SSPSPS                     S+N + SS
Sbjct: 3   DHSPSSSFPH-----PPRDHPSSSSSSPSPSPDPNSPLLPPPNPPPPPPPSTSANTTPSS 62

Query: 64  PNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAED 123
           P   N   GARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAED
Sbjct: 63  PTPTN---GARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAED 122

Query: 124 AARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPAL 183
           AARAYDRAAIILYGSRAQLNLQ++S     SSS+SSSSS SSSRS++  +LRPLLPRPA 
Sbjct: 123 AARAYDRAAIILYGSRAQLNLQASS-----SSSHSSSSSQSSSRSNNLQTLRPLLPRPAA 182

Query: 184 SSTFSFSSMASSLPLMPSPQSFTA----------IYPPPP-SLIYPNLLHNQYPAQVTQH 243
           ++ FSFSSMASSLP+M S  S ++          +YP P  +L+ PNL+H QYP Q+TQH
Sbjct: 183 AAAFSFSSMASSLPIMTSHHSSSSSNSSNFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQH 242

Query: 244 P------THEIITSSTTTVTNSTPPISTIATPSSP-TTSYSQNPNNPTLLLSSPL----- 303
           P      ++EI ++ST T T        IATPS P TTSY QNPN   LL++SP      
Sbjct: 243 PHAFSAPSNEIPSTSTVTTT--------IATPSQPSTTSYHQNPNP--LLVASPQINPTP 302

[Close]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL
Match: A0A2N9IX26 (AP2/ERF domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56581 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 4.16e-55
Identity = 144/283 (50.88%), Postives = 181/283 (63.96%), Query Frame = 0


Query: 52  ARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAA 111
           +RK KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA
Sbjct: 31  SRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAA 90

Query: 112 IILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSM 171
           IILYGSRAQLNLQ + P++   SS+SS+   SSS SS++ +LRPLLPRP+    F+F S 
Sbjct: 91  IILYGSRAQLNLQPSGPSSQ--SSSSSTRGGSSSSSSNTQTLRPLLPRPS-GFGFTFPST 150

Query: 172 ASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQ-YPAQVTQHPTH---------------- 231
           +S++P+MPS  +    Y   PS    N+  +     Q+ QH  +                
Sbjct: 151 SSTIPMMPS-SNINVPYGIFPSASPYNIAQSSPQQQQMVQHQQYNQYQPCDGNLGTVNID 210

Query: 232 --EIITSSTTTVTNSTP---------PISTIATPSSPTTSYSQNPNNPTLL-LSSPLPPL 291
             + IT++TTT +   P          I+T+    S  ++ S N NN T   + +P+ P 
Sbjct: 211 GLDHITTTTTTTSYPNPNDQQGFMYNDINTLV--GSVGSNLSLNNNNTTTQPVVAPMGPD 270

Query: 292 PSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFFDF 305
           P    +G IGP SP++ WP L  N++DY PSLWDY DPF FDF
Sbjct: 271 P----VGAIGPGSPSM-WPPL-TNEEDYTPSLWDYGDPFLFDF 301

[Close]

BLAST of CsGy6G001870 vs. TAIR 10
Match: AT2G40220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-36
Identity = 95/143 (66.43%), Postives = 118/143 (82.52%), Query Frame = 0


Query: 23  HSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAE 82
           H+    ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRSWGKWVAE
Sbjct: 10  HNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAE 69

Query: 83  IREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSS 142
           IREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP++  SSS+S S++S
Sbjct: 70  IREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAAS 129

Query: 143 SSSRSSSST-SLRPLLPRPALSS 165
           S S SSSST +LRPLLPRPA ++
Sbjct: 130 SPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of CsGy6G001870 vs. TAIR 10
Match: AT3G57600.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 116 GSRAQLNLQSTSPNNNYSSSNS 138
           G  A LNL     N   S SNS
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of CsGy6G001870 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           KGKGGP+N++  +RGVRQR WGKWVAEIREP + +R WLGTF TA++AA AYD AA  +Y
Sbjct: 67  KGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMY 126

Query: 116 GSRAQLNLQSTSPNNNYSSSNSSSSSS 143
           G  A+LN     P ++ S   S+SS S
Sbjct: 127 GPLARLNF----PRSDASEVTSTSSQS 149

[Close]

BLAST of CsGy6G001870 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           KGKGGP+N++  +RGVRQR WGKWVAEIREP + +R WLGTF TA++AA AYD AA  +Y
Sbjct: 67  KGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMY 126

Query: 116 GSRAQLNLQSTSPNNNYSSSNSSSSSS 143
           G  A+LN     P ++ S   S+SS S
Sbjct: 127 GPLARLNF----PRSDASEVTSTSSQS 149

[Close]

BLAST of CsGy6G001870 vs. TAIR 10
Match: AT1G75490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-16
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGPDN    Y+GVRQR+WGKWVAEIREP +  R WLGTF T+ +AA AYD AA  LY
Sbjct: 30  RGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLY 89

Query: 116 GSRAQLNLQS---TSPNNNYSSSNSSSSSSSSSRSSSSTSLRP 156
           G  A LNL     + P    S ++ ++ SS++   SSS S  P
Sbjct: 90  GPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESP 132

The following BLAST results are available for this feature:

BLAST of CsGy6G001870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MES8	6.4e-35	66.43	Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
C7J2Z1	1.2e-25	40.48	Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SVX5	2.2e-19	64.63	Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=370...	[more]
O82132	1.8e-16	57.47	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=370...	[more]
Q9LQZ2	7.4e-15	52.43	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CsGy6G001870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138561.1	7.90e-199	100.00	ethylene-responsive transcription factor ABI4 [Cucumis sativus] >KGN45797.1 hypo...	[more]
XP_008441640.1	9.19e-185	94.21	PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo]	[more]
XP_022959999.1	4.61e-95	62.43	ethylene-responsive transcription factor ABI4 [Cucurbita moschata]	[more]
KAG7033291.1	4.83e-94	61.16	Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma s...	[more]
KAG6602610.1	7.07e-94	60.98	Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma s...	[more]

BLAST of CsGy6G001870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBN1	3.83e-199	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=...	[more]
A0A1S3B3F1	4.45e-185	94.21	ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1H9N9	2.23e-95	62.43	ethylene-responsive transcription factor ABI4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JQI1	4.26e-94	60.63	ethylene-responsive transcription factor ABI4 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A2N9IX26	4.16e-55	50.88	AP2/ERF domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56581 ...	[more]

BLAST of CsGy6G001870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40220.1	4.6e-36	66.43	Integrase-type DNA-binding superfamily protein	[more]
AT3G57600.1	1.6e-20	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT5G05410.1	1.2e-17	57.47	DRE-binding protein 2A	[more]
AT5G05410.2	1.2e-17	57.47	DRE-binding protein 2A	[more]
AT1G75490.1	5.3e-16	52.43	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 90..106 score: 68.77 coord: 68..79 score: 73.18
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 67..130 e-value: 2.2E-38 score: 143.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 67..115 e-value: 1.5E-12 score: 47.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 67..124 score: 22.418213
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 67..124 e-value: 9.53425E-21 score: 81.9343
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 66..125 e-value: 5.6E-25 score: 89.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 24..303
None	No IPR available	PANTHER	PTHR31241:SF24	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4	coord: 24..303
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 67..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G001870.1	CsGy6G001870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding