
CsGy6G000820 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCGCCACGTCATATCCTCTTCAGTCACCCACTAGTAACGTTATCAAACTCTCCTCATCCTGATTTTTCTATATCGACCTTTCAACGCTGCTTAAACTTCCAGTTCCCTTCCTTCAATAACAATCGGTATAATTTCGTTCCTCCTCAATATCTTTGGTTCATTGGATTCATTTCTGAGCTTGTTGAGATCCTTTTTAGCTTTTCTTGTTTTTCTATTTTCTTTTTTTGTTTTCCCCTCTTTTCATTGATGAATTTGGTGCCAACTATCGAGAACTCCGGTGCTGTTTTATCTTTAGATTATAACAATTCGTATTTCTAACGCTTAGGTGAGCCATTTTTATTATACTTTTTGGTTTCTCGTAATTGTTAGGTTTAGATCTCTATTTCGTGATTCTTTATGGGATTCGCTTGCTTTATGGAAGTGTGTTGACTGTTGAAAGACTTGGTAAAATTTTAGATCTCAAGACTTTGTTTACTGTTTTTGTATTTTGTGTTGGTTTTGATATGGTATCTGTAGATCTGTTGTTGAAGATGTATGTTTTATGAAGATTTTTAGATGATAAGAATCTCTGTTGCTTTTCTGTAGCTTATTTGCTGACCTAGTTGGGAATTATTTGATTATGTTTCGTGTCTTTTGTTGTTTGATGCTCTGCAAATCCTGAAAAGAATTGGGCTGACTTTTTTTTTCTATTGCTAGAAAACGTATAATCTTGAGATCTGGGATGGAGATTAAGCATAGCAATTCCGTTTCTTAATCTTTTATGTATGTCATAAAAGCAAATTGGCTATGGAGATTTTACTGCTGTTGATTGTAGATGAGATTTTCAAGTGCAATATTCTAAAGAATGAACTTACATGTAATTTTAACTTGATATATTTTGGTCAATATTGGTTTTGATATAGGATCTGTAGATCTATTGTTGAAGATGTATGTTTTATGAAGTTCTATAGATGGTAAGAATCTTTGTTGCTTTCCTGTATTGTATTTGAAACTTATGCTGTATGTTGCGATTGGTTGTTTCTTAGAGCGGTATCCTCCACCCTCATATTTAATTTGCTGACCTAGTTGTGAATTATTTGATTTTGTTTCTTGTCTTTTGTTATTTGATGCTCTGCAAATCCTGAAAAGAATTGGTTTGACTTTTTATTCTGTTGCTAGAAAATCTAAAATCTTGAGATCTGGATACTTGTAAGAAGGTTTAGACTTCTTATGCGTAGACTACAGTACCATTCTCGATCTTTATGTGTATCTTAAAGCATATTTTCTATGGAGATTTTACTGCTGTTGCTTGTAGATGAATTTTTCAAATACAAAATTCTAAAGAATGAACTTGCATGTAATTCGATTCAAACTTGATATATTTTGATCAATATGGTTTTATTCCTGTTGTTTAAGTACTCCTGAAGCATTCTACCTCCTTTGTTCAACAAATTATTCCTTACCACGTAATCTGATCTTTCCTGCAGTCATTACATAACATCAAGATCTCATAAATACTTCAGTTCACGATGAGCCAATTACATGAACCACCACGCAGACAATTTTTCCCCTTTGGGAATCCCTTCCGCATGAGATCTCCCAAAGGTTCAAATTTACCTTCAAAACTTGTAGATATATTGAATGCTTTTGAAAGAAGTCTAGCTGAAAGACTACAAAAGCTCCATCCATCTGGTGAGGATGACGTTCTTAGCCTTTCTTGGATGATATTAGCCATGGAATTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTGGACCTCCCTGTCCCTGATTGGAATGAGAAGTTGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGATGTCTGTAACGCTCTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGGTGTGTCATCCATAATCTGGATTCTGCTGATTCAGAACGACTTGCTAGAGCTCGTACTTCCTTAGAAGAGTGGAGACAGAACATCACCACCACAAGTTCTAGAATTAAGAGTTGTTGTGTAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAATTAAGAACTCTGCCAAAGGCAAGGTTCTGATGCAGGCTTTGTACGGGGTGAAGGTACAGACAGTTTTTGTGTGCAGTGTCTTCGCCTCTGCCTTCTTAAGCTCCCCAAAGCTCTTTGATCTGGATATAGCCAATACATATTTGTGGGGACAAACTTTCTCCTCCTTGCAGAATGATGTAAATAGTGAAATTAGAAGTATATACGCACGTGGAAAGTTCACCCCTCTGAAGGAGCTTGAGGCTATTGATCAATGTGTAGGCAAACTTCAACAAATGATCCCAGAGAAGCCAGAAGTCGAAGAAGCTCAACTGCTGAAGAACAGCATATCAGAATTGGGAGGAAAGACAGAGAAACTATCAAAAGATCTACATTCGCTTACAAAGGAAGTCGACAACTTTTTCCAAATTGTTTTGGCAGGACGCGATGCTTTGCTATCAAACCTAAGGGGTTGTTAAACTTAAAATGGAGTCAATGCAAGGAATAGAACAAGTCGAACAAGCAATCAGACGATTACGGCAGAGCTTAACTTAAACCTGTGTACAGGGATGGGTTGGTGTCTCTTGTGTTTCTACTACAGAAATATATTAACTAACCATAGTATAGTGTAATAATGTAGTGTTTAGTTATATTAGAAATGCTTTTGGGTTGTATTGCTAATTACGGTCTTGTAAGTTTGAACTTTGAAATGAAAATGTGTAATGTGGGTTTCTATATTTGAGCATCCGTTCTCTACATATTCTTCTGTTTGGCTCTTGTTAATATGATTGTTCATTTGTCTTTCCATTTTTCTCATTTTTGAAATTGAATAGAGAGAAAAGTAGTCTATATAACATTCAACTCAAAATATCTAATGTAAACCAACACACCAATACAGGTTTTTGACGGTGCGACTTGGAAGGACCTGGAGATGGCACCTGGAGGAACTGTTTCATTTCTACGATTTCTCCTCTCTCTATTGAATTAATTTACATAATTCAATGGTAATTGACATCAATGCTGATGATAATTGACAAATCGACATTTTACACAACTTAACTCGATTGTAATGAGTTTGATGGATTTTTTTAAGATTGGCAGAGGGTTCAACCATTCAACTCCAAAGCGTTTTTTGGATCTTAAAAAAAGAAAACCACACTCAAGCTAAACTGAGGACCTCAACCCATCATACAAGTCATTTAATGGACAACACAGTTTGCATTAAAGTCTAAAATTCTCTCATAAATTGGCGTGCCAGCAGTTGACACCACTTTTAGCCTAAAACTGACACCAATCAACCTACTCAAAATATATGAATAACCTTCATTATTTGAAATTTAAATTTTACATTTGATCTATTCTTATGAT CCCCGCCACGTCATATCCTCTTCAGTCACCCACTAGTAACGTTATCAAACTCTCCTCATCCTGATTTTTCTATATCGACCTTTCAACGCTGCTTAAACTTCCAGTTCCCTTCCTTCAATAACAATCGGTATAATTTCGTTCCTCCTCAATATCTTTGGTTCATTGGATTCATTTCTGAGCTTGTTGAGATCCTTTTTAGCTTTTCTTGTTTTTCTATTTTCTTTTTTTGTTTTCCCCTCTTTTCATTGATGAATTTGGTGCCAACTATCGAGAACTCCGGTGCTGTTTTATCTTTAGATTATAACAATTCGTATTTCTAACGCTTAGTCATTACATAACATCAAGATCTCATAAATACTTCAGTTCACGATGAGCCAATTACATGAACCACCACGCAGACAATTTTTCCCCTTTGGGAATCCCTTCCGCATGAGATCTCCCAAAGGTTCAAATTTACCTTCAAAACTTGTAGATATATTGAATGCTTTTGAAAGAAGTCTAGCTGAAAGACTACAAAAGCTCCATCCATCTGGTGAGGATGACGTTCTTAGCCTTTCTTGGATGATATTAGCCATGGAATTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTGGACCTCCCTGTCCCTGATTGGAATGAGAAGTTGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGATGTCTGTAACGCTCTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGGTGTGTCATCCATAATCTGGATTCTGCTGATTCAGAACGACTTGCTAGAGCTCGTACTTCCTTAGAAGAGTGGAGACAGAACATCACCACCACAAGTTCTAGAATTAAGAGTTGTTGTGTAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAATTAAGAACTCTGCCAAAGGCAAGGTTCTGATGCAGGCTTTGTACGGGGTGAAGGTACAGACAGTTTTTGTGTGCAGTGTCTTCGCCTCTGCCTTCTTAAGCTCCCCAAAGCTCTTTGATCTGGATATAGCCAATACATATTTGTGGGGACAAACTTTCTCCTCCTTGCAGAATGATGTAAATAGTGAAATTAGAAGTATATACGCACGTGGAAAGTTCACCCCTCTGAAGGAGCTTGAGGCTATTGATCAATGTGTAGGCAAACTTCAACAAATGATCCCAGAGAAGCCAGAAGTCGAAGAAGCTCAACTGCTGAAGAACAGCATATCAGAATTGGGAGGAAAGACAGAGAAACTATCAAAAGATCTACATTCGCTTACAAAGGAAGTCGACAACTTTTTCCAAATTGTTTTGGCAGGACGCGATGCTTTGCTATCAAACCTAAGGGGTTGTTAAACTTAAAATGGAGTCAATGCAAGGAATAGAACAAGTCGAACAAGCAATCAGACGATTACGGCAGAGCTTAACTTAAACCTGTGTACAGGGATGGGTTGGTGTCTCTTGTGTTTCTACTACAGAAATATATTAACTAACCATAGTATAGTGTAATAATGTAGTGTTTAGTTATATTAGAAATGCTTTTGGGTTGTATTGCTAATTACGGTCTTGTAAGTTTGAACTTTGAAATGAAAATGTGTAATGTGGGTTTCTATATTTGAGCATCCGTTCTCTACATATTCTTCTGTTTGGCTCTTGTTAATATGATTGTTCATTTGTCTTTCCATTTTTCTCATTTTTGAAATTGAATAGAGAGAAAAGTAGTCTATATAACATTCAACTCAAAATATCTAATGTAAACCAACACACCAATACAGGTTTTTGACGGTGCGACTTGGAAGGACCTGGAGATGGCACCTGGAGGAACTGTTTCATTTCTACGATTTCTCCTCTCTCTATTGAATTAATTTACATAATTCAATGGTAATTGACATCAATGCTGATGATAATTGACAAATCGACATTTTACACAACTTAACTCGATTGTAATGAGTTTGATGGATTTTTTTAAGATTGGCAGAGGGTTCAACCATTCAACTCCAAAGCGTTTTTTGGATCTTAAAAAAAGAAAACCACACTCAAGCTAAACTGAGGACCTCAACCCATCATACAAGTCATTTAATGGACAACACAGTTTGCATTAAAGTCTAAAATTCTCTCATAAATTGGCGTGCCAGCAGTTGACACCACTTTTAGCCTAAAACTGACACCAATCAACCTACTCAAAATATATGAATAACCTTCATTATTTGAAATTTAAATTTTACATTTGATCTATTCTTATGAT ATGAGCCAATTACATGAACCACCACGCAGACAATTTTTCCCCTTTGGGAATCCCTTCCGCATGAGATCTCCCAAAGGTTCAAATTTACCTTCAAAACTTGTAGATATATTGAATGCTTTTGAAAGAAGTCTAGCTGAAAGACTACAAAAGCTCCATCCATCTGGTGAGGATGACGTTCTTAGCCTTTCTTGGATGATATTAGCCATGGAATTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTGGACCTCCCTGTCCCTGATTGGAATGAGAAGTTGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGATGTCTGTAACGCTCTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGGTGTGTCATCCATAATCTGGATTCTGCTGATTCAGAACGACTTGCTAGAGCTCGTACTTCCTTAGAAGAGTGGAGACAGAACATCACCACCACAAGTTCTAGAATTAAGAGTTGTTGTGTAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAATTAAGAACTCTGCCAAAGGCAAGGTTCTGATGCAGGCTTTGTACGGGGTGAAGGTACAGACAGTTTTTGTGTGCAGTGTCTTCGCCTCTGCCTTCTTAAGCTCCCCAAAGCTCTTTGATCTGGATATAGCCAATACATATTTGTGGGGACAAACTTTCTCCTCCTTGCAGAATGATGTAAATAGTGAAATTAGAAGTATATACGCACGTGGAAAGTTCACCCCTCTGAAGGAGCTTGAGGCTATTGATCAATGTGTAGGCAAACTTCAACAAATGATCCCAGAGAAGCCAGAAGTCGAAGAAGCTCAACTGCTGAAGAACAGCATATCAGAATTGGGAGGAAAGACAGAGAAACTATCAAAAGATCTACATTCGCTTACAAAGGAAGTCGACAACTTTTTCCAAATTGTTTTGGCAGGACGCGATGCTTTGCTATCAAACCTAAGGGGTTGTTAA MSQLHEPPRRQFFPFGNPFRMRSPKGSNLPSKLVDILNAFERSLAERLQKLHPSGEDDVLSLSWMILAMELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNALSSELSHLNQSNLMLRCVIHNLDSADSERLARARTSLEEWRQNITTTSSRIKSCCVILDSLVESLDLPKIKNSAKGKVLMQALYGVKVQTVFVCSVFASAFLSSPKLFDLDIANTYLWGQTFSSLQNDVNSEIRSIYARGKFTPLKELEAIDQCVGKLQQMIPEKPEVEEAQLLKNSISELGGKTEKLSKDLHSLTKEVDNFFQIVLAGRDALLSNLRGC* Homology
BLAST of CsGy6G000820 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 7.4e-85 Identity = 165/333 (49.55%), Postives = 235/333 (70.57%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 2.1e-63 Identity = 140/327 (42.81%), Postives = 200/327 (61.16%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 4.7e-63 Identity = 140/327 (42.81%), Postives = 198/327 (60.55%), Query Frame = 0
BLAST of CsGy6G000820 vs. NCBI nr
Match: XP_004138476.1 (protein BPS1, chloroplastic [Cucumis sativus] >XP_004138477.1 protein BPS1, chloroplastic [Cucumis sativus] >XP_031743344.1 protein BPS1, chloroplastic [Cucumis sativus] >KGN45688.1 hypothetical protein Csa_005547 [Cucumis sativus]) HSP 1 Score: 652 bits (1682), Expect = 8.36e-236 Identity = 333/334 (99.70%), Postives = 334/334 (100.00%), Query Frame = 0
BLAST of CsGy6G000820 vs. NCBI nr
Match: XP_008458175.1 (PREDICTED: protein BPS1, chloroplastic [Cucumis melo] >XP_008458176.1 PREDICTED: protein BPS1, chloroplastic [Cucumis melo] >XP_008458178.1 PREDICTED: protein BPS1, chloroplastic [Cucumis melo]) HSP 1 Score: 628 bits (1620), Expect = 2.36e-226 Identity = 319/334 (95.51%), Postives = 327/334 (97.90%), Query Frame = 0
BLAST of CsGy6G000820 vs. NCBI nr
Match: TYK03038.1 (protein BPS1 [Cucumis melo var. makuwa]) HSP 1 Score: 591 bits (1524), Expect = 4.78e-212 Identity = 302/314 (96.18%), Postives = 309/314 (98.41%), Query Frame = 0
BLAST of CsGy6G000820 vs. NCBI nr
Match: XP_038874452.1 (protein BPS1, chloroplastic [Benincasa hispida] >XP_038874453.1 protein BPS1, chloroplastic [Benincasa hispida] >XP_038874455.1 protein BPS1, chloroplastic [Benincasa hispida]) HSP 1 Score: 570 bits (1468), Expect = 3.29e-203 Identity = 289/334 (86.53%), Postives = 309/334 (92.51%), Query Frame = 0
BLAST of CsGy6G000820 vs. NCBI nr
Match: XP_022147201.1 (protein BPS1, chloroplastic [Momordica charantia] >XP_022147202.1 protein BPS1, chloroplastic [Momordica charantia] >XP_022147204.1 protein BPS1, chloroplastic [Momordica charantia]) HSP 1 Score: 546 bits (1406), Expect = 9.12e-194 Identity = 278/334 (83.23%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy TrEMBL
Match: A0A0A0K878 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006740 PE=4 SV=1) HSP 1 Score: 652 bits (1682), Expect = 4.05e-236 Identity = 333/334 (99.70%), Postives = 334/334 (100.00%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy TrEMBL
Match: A0A1S3C776 (protein BPS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497694 PE=4 SV=1) HSP 1 Score: 628 bits (1620), Expect = 1.14e-226 Identity = 319/334 (95.51%), Postives = 327/334 (97.90%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy TrEMBL
Match: A0A5D3BVL5 (Protein BPS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001330 PE=4 SV=1) HSP 1 Score: 591 bits (1524), Expect = 2.31e-212 Identity = 302/314 (96.18%), Postives = 309/314 (98.41%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy TrEMBL
Match: A0A6J1D0B6 (protein BPS1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016210 PE=4 SV=1) HSP 1 Score: 546 bits (1406), Expect = 4.42e-194 Identity = 278/334 (83.23%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of CsGy6G000820 vs. ExPASy TrEMBL
Match: A0A6J1L5F0 (protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499286 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 1.47e-192 Identity = 280/332 (84.34%), Postives = 298/332 (89.76%), Query Frame = 0
BLAST of CsGy6G000820 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 363.2 bits (931), Expect = 2.2e-100 Identity = 184/333 (55.26%), Postives = 245/333 (73.57%), Query Frame = 0
BLAST of CsGy6G000820 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) ) HSP 1 Score: 315.5 bits (807), Expect = 5.3e-86 Identity = 165/333 (49.55%), Postives = 235/333 (70.57%), Query Frame = 0
BLAST of CsGy6G000820 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) ) HSP 1 Score: 315.5 bits (807), Expect = 5.3e-86 Identity = 165/333 (49.55%), Postives = 235/333 (70.57%), Query Frame = 0
BLAST of CsGy6G000820 vs. TAIR 10
Match: AT4G01360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 99 Blast hits to 99 proteins in 25 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 189.5 bits (480), Expect = 4.4e-48 Identity = 120/329 (36.47%), Postives = 192/329 (58.36%), Query Frame = 0
BLAST of CsGy6G000820 vs. TAIR 10
Match: AT3G61500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46080.1); Has 90 Blast hits to 90 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 2.6e-24 Identity = 69/167 (41.32%), Postives = 97/167 (58.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|