CsGy5G030380 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTGTGGGGAGAAGGAAGTGGGGAATTTGTGAAGGAGAAGATGGGCGAGTCTTCAGGACTCGACCCTCTTTCAATTTTGCAGGTGGCGTGGGAATCTTGATGACCAGCAGCACAGTGAGGCGTTGCAGGTGGCTGTTCATGACTTCTTCCATCAACCTCATCAACTTCCTAATATCAAGAACTTTTCAAATTTAAAACTGTGTACACACCCCATTTCTTCCATAACCCCATCTCCTCCTTAACCCCAAGTTACCAAAACAGAGAAGCCAAGGATAATGGAAGAAGACAGGATTAGCTTCTTACCAAAAACCATTCTCTATTACATTGTTTCCTTCATTGATACCCCAAGTGCTCATCAAAGCCACTCCTTTTTCTTTTTATCAAAAAGGTGGACAATTCTTTGGACTTCAATCCCATCTTTACTCTGACTTCCCCTCTTTCTCATGTCGTCATTCAGATCAACGTGAAAAATGCTTCCGCCGTTTCATCAAACGGGTTTTATCTTGTCGCCTTAACCATTTCGTCCATAAACGGGTTGTATTGCCACGCATACAAGAAAGAAGGTAGACTAGAGAATGACAACCATCTATGTGGGAACTTGATACATACAAACTTACTTAGACCTAGGCATGCTAACATTTTCCACCTTTATGTGAAGTCAATGATTTTATAATGGTACACTTTGAATTTGAAATTGTGTTAAATGAAGATGGTCCATTGGTTCTGTGACCCTGTAAAGTTGAATTCATGAAGTTCCTTGGTCGTTTGGGTTTTGTTTAGCTCGAGGCAGGGTTTGTGGCATTATGACTGAGGAGGTACTCCATTTTGGGATGAGGGCAGGATTTTGTAGTAGGTTTGTTTATTTGTTTAGTGTGTATAATGCCTTGAGAAAAATGGTGGATTATTAGGGAGGTTGAGAGATCATGAGAAAAAGGTTTGAGGTTCTGGTTGCTAGTTTTAATGCATCCATATGGGCGTTTGTAACCTAACACTTCTGTAATTATGAGCTTGATTTGATCTTTTGCAATTATTTTGTGGGTGGATTCCTTTTTTTTTGTATGTTCCAGTATACTTTTATCTCTCCATGAAAGTGCAGTCTCTCACCAAAGATAAAACAAAACAAAATTTGGGTTGTTGGTTGTGTGAATTGTACTAGGAAACCTTTTTAAACTTTGATTGGAAAGAAACTAATGACTTGGAAACTTGAACTATAATGAACTCTGCTGGTTGGAATTGTCTATTGGGCGCCTCTTGAAATTCTAACCTCTAAAATCCCACCTTCAGTACCGTAAGCGCAAAGTATTTTATTTGCCATATACTTCTAGTTGGACAGTTTTTGAAACCATTTATGATTTATTCCACATTTTTGTTGTGGTTCTAGGTGTTGCATTAGTTATTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAACGATGATGATGATGGATCGAGACAATCTGTACTTGAAAGTGTATGCCAAAAGATAATCGAGAAAGTGATGAGAGATCATGAAGACGAGAAATTGTGTGCATGCGCATTCCTGTTTCTATCAAACGTTTTGTTATATTAGAATGGTTATGTGATGTATTGACGTTCAGAAGTTTTGGAAGTTAAATGATTTTGGTATTTAGGCAATTGCACCTACCAAACATGAGAATTCAATGAAAAATAGTTGTGTATTGTCATTTGAATTGTAATAATGCCATCTTATCATCATTTCCCATGCATTTGAATTGTAACAATGACTTCCAAATAACTAAATATGGGAACTTTAAACCCTTTCATTTACCTCTTGGCATATCCTCTGTATTTTTAATAATTTTTGTACAATGTGTTCATAAACCACTTCTTAGTTCTGATCATTTCAATGTCGAAAAGAAATGATCTGGTTTATTTGGACAGAATCAGCCCTCTTCTTCATGAAATTTTATCCTTTTTAGACACAAAACAAGTTGTTCAAACTTGTGTTCTATGAAAGAGGTGGAGAACCCTGTGGACTCACATTCCCACACTCGACTTTGATTTCAACTCCTTCCATAATAAATATTTTACATCAAAGGTGTTTTTCACGAACTTCCCAACACTTCATGAATCAGATTAATAATGTTAACAAAGGTTGGAAACATATTTATTGCAAGTTGAAAGACGAGTAGCAGATAGATATAACAAAACTAAGTTAATTAAAAGGCATTGGTTTAAACCACGGCTTCTCGTTTCCACTGCTATGTTTTCCCAAGCCCAATTTGTAGTAATTAATGAATTCACATATTCCAAAATTGCAAAACCAAAAACACTGTTTCAACATCTCTATATAACAATGCCCTGTTCACAAAACTTTTCCAACAATATTTCTGATATCATCATGTCAATATACCAACACGATGATGTGGACAGAATCAGCTGTTTACCAGATTGTATTCTTCATGACATTCTATCCTTTTTAGAGAAAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAATCGCCACGCTCGTTCTTGGATGTATCAACATCCTTTAACCGTTTCATGTTGAGAGCTTTAACACAACATGGTGGTGAATTTATTCAAAAATTGATTTACTCGTATTTGGAATTTGGTGAAGAGAGTTTCTTGACAAAAGCCTTACCTTATACCCCATTCCACAAGGCTCAACAGCTTTACATTACCACTGACTATGCATTTGAATCAATGTGGTCATGTTTATCAGCTTGTAAATTGCTAACTGTGTTGAACGGTAAATGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAATGTTTGTTTTGGATATTTGTGATGACTATTCTGACTACTACGATTATCAGGTGGCCAATGATCAGGACGTCTATGGCATACTGTTGAATGGAAATAGAAAGACGTTATTATCAGGTTGTCCAAACTTGGAATACTGA ATGATAGTGTGGGGAGAAGGAAGTGGGGAATTTGTGAAGGAGAAGATGGGCGAGTGGCGTGGGAATCTTGATGACCAGCAGCACAGTGAGGCGTTGCAGATCAACGTGAAAAATGCTTCCGCCGTTTCATCAAACGGGTTTTATCTTGTCGCCTTAACCATTTCGTCCATAAACGGGTTGTATTGCCACGCATACAAGAAAGAAGGTGTTGCATTAGTTATTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAACGATGATGATGATGGATCGAGACAATCTGTACTTGAAAGTAGAAAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAATCGCCACGCTCGTTCTTGGATGTATCAACATCCTTTAACCGTTTCATGTTGAGAGCTTTAACACAACATGGTGGTGAATTTATTCAAAAATTGATTTACTCGTATTTGGAATTTGGTGAAGAGAGTTTCTTGACAAAAGCCTTACCTTATACCCCATTCCACAAGGCTCAACAGCTTTACATTACCACTGACTATGCATTTGAATCAATGTGGTCATGTTTATCAGCTTGTAAATTGCTAACTGTGTTGAACGGTAAATGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAATGTTTGTTTTGGATATTTGTGATGACTATTCTGACTACTACGATTATCAGGTGGCCAATGATCAGGACGTCTATGGCATACTGTTGAATGGAAATAGAAAGACGTTATTATCAGGTTGTCCAAACTTGGAATACTGA ATGATAGTGTGGGGAGAAGGAAGTGGGGAATTTGTGAAGGAGAAGATGGGCGAGTGGCGTGGGAATCTTGATGACCAGCAGCACAGTGAGGCGTTGCAGATCAACGTGAAAAATGCTTCCGCCGTTTCATCAAACGGGTTTTATCTTGTCGCCTTAACCATTTCGTCCATAAACGGGTTGTATTGCCACGCATACAAGAAAGAAGGTGTTGCATTAGTTATTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAACGATGATGATGATGGATCGAGACAATCTGTACTTGAAAGTAGAAAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAATCGCCACGCTCGTTCTTGGATGTATCAACATCCTTTAACCGTTTCATGTTGAGAGCTTTAACACAACATGGTGGTGAATTTATTCAAAAATTGATTTACTCGTATTTGGAATTTGGTGAAGAGAGTTTCTTGACAAAAGCCTTACCTTATACCCCATTCCACAAGGCTCAACAGCTTTACATTACCACTGACTATGCATTTGAATCAATGTGGTCATGTTTATCAGCTTGTAAATTGCTAACTGTGTTGAACGGTAAATGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAATGTTTGTTTTGGATATTTGTGATGACTATTCTGACTACTACGATTATCAGGTGGCCAATGATCAGGACGTCTATGGCATACTGTTGAATGGAAATAGAAAGACGTTATTATCAGGTTGTCCAAACTTGGAATACTGA MIVWGEGSGEFVKEKMGEWRGNLDDQQHSEALQINVKNASAVSSNGFYLVALTISSINGLYCHAYKKEGVALVICQADPVLNDGQSGNDDDDGSRQSVLESRKNKLFKLVFSQSNGKSPRSFLDVSTSFNRFMLRALTQHGGEFIQKLIYSYLEFGEESFLTKALPYTPFHKAQQLYITTDYAFESMWSCLSACKLLTVLNGKCFVGSHLESMVLPSLRMFVLDICDDYSDYYDYQVANDQDVYGILLNGNRKTLLSGCPNLEY* Homology
BLAST of CsGy5G030380 vs. NCBI nr
Match: KAE8649007.1 (hypothetical protein Csa_008094 [Cucumis sativus]) HSP 1 Score: 504 bits (1297), Expect = 9.99e-174 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsGy5G030380 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida]) HSP 1 Score: 139 bits (351), Expect = 1.85e-33 Identity = 75/141 (53.19%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of CsGy5G030380 vs. NCBI nr
Match: KAE8651297.1 (hypothetical protein Csa_000941 [Cucumis sativus]) HSP 1 Score: 108 bits (270), Expect = 1.35e-23 Identity = 71/140 (50.71%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of CsGy5G030380 vs. NCBI nr
Match: XP_038890212.1 (F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida]) HSP 1 Score: 93.6 bits (231), Expect = 3.07e-18 Identity = 63/141 (44.68%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of CsGy5G030380 vs. NCBI nr
Match: XP_022141790.1 (F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia]) HSP 1 Score: 75.9 bits (185), Expect = 4.54e-12 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 0
BLAST of CsGy5G030380 vs. ExPASy TrEMBL
Match: A0A0A0KSU4 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650450 PE=4 SV=1) HSP 1 Score: 474 bits (1221), Expect = 6.40e-162 Identity = 244/292 (83.56%), Postives = 245/292 (83.90%), Query Frame = 0
BLAST of CsGy5G030380 vs. ExPASy TrEMBL
Match: A0A6J1CJ42 (F-box/FBD/LRR-repeat protein At1g16930-like OS=Momordica charantia OX=3673 GN=LOC111012076 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.20e-12 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 0
BLAST of CsGy5G030380 vs. ExPASy TrEMBL
Match: A0A6J1CJT8 (F-box/FBD/LRR-repeat protein At2g04230-like OS=Momordica charantia OX=3673 GN=LOC111012079 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.67e-11 Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of CsGy5G030380 vs. ExPASy TrEMBL
Match: A0A0A0LDG8 (Phosducin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849940 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.79e-08 Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of CsGy5G030380 vs. ExPASy TrEMBL
Match: A0A5D3BNX8 (Phosducin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00560 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.18e-08 Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of CsGy5G030380 vs. TAIR 10
Match: AT5G14240.1 (Thioredoxin superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04 Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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