CsGy5G030360 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G030360
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Mediator of RNA polymerase II transcription subunit 17
Location	Gy14Chr5: 33396403 .. 33401430 (+)
RNA-Seq Expression	CsGy5G030360
Synteny	CsGy5G030360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGTTGCTTCTGCTGAATTGTGTAAGTTATAAATGTTTCTAACTGTAATGTTTTTTTGCATCTTTTTCACAATAGTTGTATTGGAAAATACAGACTGTTTCATTAAATTTCTAATAACTCAATTTCTCTCCCAGCACAGTCAGGCCTCTCAACTATTCTTTAGTGTGAGGTATGTAAGCTTAATTTTCTTTCTTTACATATATATATATCTGGGTTTTGATGTAGTGTTGTGTTTGTTAGGTTGAAGACCTTGTTTGGGTCTTTATGGTAGATGACTCAATTTTGAGCGGTCCAAAAATTTCCTCAACTTAACCTATATACACCTCTTATGCATATCCAAAAATTTCATGGACAATTTTGTCATTTTTGTTTTTTGTGGTCATCATCTGAGACAGATTTGCCCTCCGTTAGACTCGCATGCTGATCATGGACTTTTCCATTCTAGGGCTTGCTTCAAACCTTTCCCTCCCAAGATTACCTAAATTTAAAGGATTGGGTTAGGTTGGAGACCTTGTTTGGGTCTTTATGGTAGATGACTGAAAATTTTGAGTGGTCCAAAAAACTTCTCAACTCAACCCATATAAACCCCTTATGTATATAAAAATTTTCAGGGACAATTCTGTAATTTTTTTTTATGGTCATCAGCTGAGACAGAGTTGAGGACTCTCACTAATCACGGACTTGTCTTCCATTCTAGGGCTTGCTCCAAACCTTTTCCCTCCCAAGATTATTCTGGGAAAGTACAGTGTGAATATGGATGAAGACATGAAAGTTTCTCTTGACAAGCTTCCTGTTAAGCGCTTGGAGGCCATAGAAGAGAATGGTCTCGAACGATTTCCATCGTATGTCCCTTCTTCCCTGGTTTTCTCCCCATTTTTCTTCCTGAGATGAAACATTAATTAGTTTGTATGTGCGTTATGGTAGAAGAAGATATGTCTTAGTTGATGAATGTCTGCTTATGCTTCAACATTGTTAATTTTGTTTACTTTTGTGTCCGTATATTGGTGATCACTTGGAGTGATCTCTACACAATTGATCGCATTCTGCTAAATTGCATCTGATCTTTAAATGTATTTTTTAATTTTCTTGGTAAAAGTTTATGCTCAATTTCTTTGATTAATTGAGATTGATTTGTGTTATATTGTTAACAGAGATGTTGGTTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCATGGCAATGGCAGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGAGTTTATATATCATATGCCTCTAATTTGCTAGATTCTTTTACCATACAATGCCTCTAATTTGCTAGATATTTTTTAGCATAACGTTCTTTGAATAAATAATGGGAAAACGTTGCTTGTATTAGTTTCAATCAATAAATGTGCATGCAAATATTTCTTTGTTCTAAAGAAAAAAGGTGCAAGCAAATGTATAGGCAAATTGTCTTAGATTTTTCATTACATATATGTCTTGGCATATTTTTCTTTTTCAAAAAGCGTGGCACTAAAGTGCAATAGTCCTTTTGAACTTAACTTAAGTGCAAGGTGCGAAAAAAATAAGTGTAAAATATAAGTGTAAAGACAGCAGAAAAGAGATTTTATTGAAGATCGTCGAGAAAATGGCAATAATTTTTTTATACAAGATTAAGTGTAAAATATAGAGATTTTATTGGAGACCGTCGGAAGAAAAATAAACATTATAGTAAAATATTTTTTAGTTTCTTTAAAAGTAATAGAAAAAGAATATTGGGCTTATCTCAAGTGCGCTTTATTAATGGTGCCTTCTCTGGAAAGTGCATGTAGGCGTAGTTTTCTAAACACAGTCTTGTACGGAGGATTCATCAACCTACAAACTGATCTTTAATTTTTATTAGCTTTATGGATATACATTGACAATGTGTCTGACAAAATCATATTGTTGACTTGAGTTCTCTTACACTAGGCTCTCTGTAAATCACCATTTCATCTCTCCTAGCGGAAGATTTTGATGCTTTATGTCTTTTTTCATTTTTCTCTCCCAAGAATTGTTTGGGAGAACCAGGTTCTGTCGGTTTCATTAGGGAGGAGATAGGATTAAACTCATAATTGTCAGGATTTAGAATTGTGGTTATTTTTCTTTGCTTGCTAGCTGTAATGAATTAGTTTTAATAAAATGGTTTCTTGAGAATATTATATTTAGAAACATTGTGCCATTATAAGTATTATCTATCTTGATATAACTGTAGGTGGAAGCTAATGATGCAGTAACTGTGGCTGGAATGACAAGGCCAAAACCATTACCTAATGAAGTTCTAGCAGATCTTGGAGTTTCTGTAGCAACGAAACTACAATGCTTTCGAGTACTATTTTTATCCTTCTTTTCTTCTCAGAAGTGATGCTTGAGCTTGACTTACGCCCTTATTTCCTTATTTGATTACCTTACTTTGATTGGGCTGGCACGACCATGTTGTAAACATCAATTGCCAGTATTATTCGATTCATATTTTATGTTATTATTTGTACTATCAATTTAAAAGTGCCTGATTTTATCATTTACCCCTTCATCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGGTAATCAATTCTCTTCATTTATCAAACGACCATCGTGCTATGAATCTATGCTCAAAATTGTATGCCATTGTTAAATACAAGTATATATCAATGAATTATAGTACAATATATATTGAAGCAATCGGAAACCTTTTGATGCTCTCAATGCTTTCCAATTTCATATATTTTCAGTATTTTCTGATGATGTATATCAGATTGCAGCAAAACTGGAAGGTTAAAAGGCAGCGAGTTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCATCCGTCTTTCGACCATCATCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTTTGGAACGTGATAAAAATGAGTCTACAAATCCTTCCAATCAGTCTTCGGTAAACAGGGAAAAGGAGTTTACAAATGACGATGAGTACATAAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGCGAGCAGGTAGTTTCTTTAATACTTTGATCTTTGCTCATTTGAAGTCCTTCCTACTTTTGTTCCCCATCACATGATATCCCATTTTTTTTCCTGGTTTCAGGTGTTTGATTTGGTGAATCAGGAAGCATTCAATCCATCTGTTGGTATCAACGTGACTGGCATACGAGAAAATTACTTACAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTAGTGCCATCTGGTCAAAGTTCCCAAACTGTTGAAGGTGCAAATTCCGAGATTCTGGAAAATGCAAGTTTGCCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCACTTGAAAAGAAATTGCGGAATCCTAATCATATAACTTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCTGGTCAAGTTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCGCTGGCTCACAGAATGTTCGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTAAAGTCCTAACACTTGATAATTAATCAATTTCCAGTGGAAGCACACTGCTTCACAAGAATTATGCTTTATGCATTTGATGTTACCAGCATATTAATCTTGGAAGTTTAACTTTGGTTGGTTCTCAGGTCTGGAAAGTCCCATTTCTTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCTTGGACGTTTTTTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCAAGGCTCGTACATCAGACGGTTATCAAATGAATAATGTAACCAAAACACAGTTTCTAACTAAAGTTGTTGTAAATGATGATTGCATTACCATTGAAGGAGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATTTATTCAACGAACAGATACAGCTGTGACTTGGCCGATCTTCCTGTTATAATTCTGTTGCAGGTGAGTTCAAAGTAGATTTCCTTGCTTTTGAGCTTCTTTATCACTGGAAAGTAGCAGTAAAAGTAGTGTTGTGTTTCCGTAACAGGTTGCGAGCCAGATTATTCTTTGGCTTCACGAGGAGGCTCTAATCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTTGAACAAGGTGAAACACTCCGGCTGGTAGCCCACGTGGACCCAGAAGATCCTCAAGGATGTCTTTCATGGTGGTTGGTAATGGACGACGGATTGATGGAAGACAGGAAACTTAACTTTGAGACTTCAGATGTTGTACCTGAATACAGGAAGTTTTTGGGGCATTTATCTCTAGAAGTTTTGCATTCAACATTAATGGATTTGGTTAGTTTATGCAGTGGAGTTGGTGGTAGCCTATAACCATGATTTTCTTGTCTCGAATTACAAATAGAAATTGCATCGTCTTCTTGTAATTGTAATTCCGCCTCTAGATTTTTGGATCTAATGGTATCTTCAGTTTTTTGTCTGCATTGCTTACTGAACACCTCATGTATTACTTATAGCTTATGCAAAAATTGTGAATGTAAAGCAATGGATGGCTGGAAGCTGACTTCAAGAGGAAGAAACTGTTTAGTGATATTTAGTTTTTAAGTTTGAGGTAACTTTTTTTTAATAACAAATTTTTAAAAATATAGCAAA

mRNA sequence

ATAAGTTGCTTCTGCTGAATTGTGTAAGTTATAAATGTTTCTAACTGTAATGTTTTTTTGCATCTTTTTCACAATAGTTGTATTGGAAAATACAGACTGTTTCATTAAATTTCTAATAACTCAATTTCTCTCCCAGCACAGTCAGGCCTCTCAACTATTCTTTAGTGTGAGGTATGTAAGCTTAATTTTCTTTCTTTACATATATATATATCTGGGTTTTGATGTAGTGTTGTGTTTGTTAGGTTGAAGACCTTGTTTGGGTCTTTATGGTAGATGACTCAATTTTGAGCGGTCCAAAAATTTCCTCAACTTAACCTATATACACCTCTTATGCATATCCAAAAATTTCATGGACAATTTTGTCATTTTTGTTTTTTGTGGTCATCATCTGAGACAGATTTGCCCTCCGTTAGACTCGCATGCTGATCATGGACTTTTCCATTCTAGGGCTTGCTTCAAACCTTTCCCTCCCAAGATTACCTAAATTTAAAGGATTGGGTTAGGTTGGAGACCTTGTTTGGGTCTTTATGGTAGATGACTGAAAATTTTGAGTGGTCCAAAAAACTTCTCAACTCAACCCATATAAACCCCTTATGTATATAAAAATTTTCAGGGACAATTCTGTAATTTTTTTTTATGGTCATCAGCTGAGACAGAGTTGAGGACTCTCACTAATCACGGACTTGTCTTCCATTCTAGGGCTTGCTCCAAACCTTTTCCCTCCCAAGATTATTCTGGGAAAGTACAGTGTGAATATGGATGAAGACATGAAAGTTTCTCTTGACAAGCTTCCTGTTAAGCGCTTGGAGGCCATAGAAGAGAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCATGGCAATGGCAGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACTGTGGCTGGAATGACAAGGCCAAAACCATTACCTAATGAAGTTCTAGCAGATCTTGGAGTTTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAACTGGAAGGTTAAAAGGCAGCGAGTTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCATCCGTCTTTCGACCATCATCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTTTGGAACGTGATAAAAATGAGTCTACAAATCCTTCCAATCAGTCTTCGGTAAACAGGGAAAAGGAGTTTACAAATGACGATGAGTACATAAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGCGAGCAGGTGTTTGATTTGGTGAATCAGGAAGCATTCAATCCATCTGTTGGTATCAACGTGACTGGCATACGAGAAAATTACTTACAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTAGTGCCATCTGGTCAAAGTTCCCAAACTGTTGAAGGTGCAAATTCCGAGATTCTGGAAAATGCAAGTTTGCCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCACTTGAAAAGAAATTGCGGAATCCTAATCATATAACTTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCTGGTCAAGTTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCGCTGGCTCACAGAATGTTCGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTCTGGAAAGTCCCATTTCTTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCTTGGACGTTTTTTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCAAGGCTCGTACATCAGACGGTTATCAAATGAATAATGTAACCAAAACACAGTTTCTAACTAAAGTTGTTGTAAATGATGATTGCATTACCATTGAAGGAGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATTTATTCAACGAACAGATACAGCTGTGACTTGGCCGATCTTCCTGTTATAATTCTGTTGCAGGTTGCGAGCCAGATTATTCTTTGGCTTCACGAGGAGGCTCTAATCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTTGAACAAGGTGAAACACTCCGGCTGGTAGCCCACGTGGACCCAGAAGATCCTCAAGGATGTCTTTCATGGTGGTTGGTAATGGACGACGGATTGATGGAAGACAGGAAACTTAACTTTGAGACTTCAGATGTTGTACCTGAATACAGGAAGTTTTTGGGGCATTTATCTCTAGAAGTTTTGCATTCAACATTAATGGATTTGGTTAGTTTATGCAGTGGAGTTGGTGGTAGCCTATAACCATGATTTTCTTGTCTCGAATTACAAATAGAAATTGCATCGTCTTCTTGTAATTGTAATTCCGCCTCTAGATTTTTGGATCTAATGGTATCTTCAGTTTTTTGTCTGCATTGCTTACTGAACACCTCATGTATTACTTATAGCTTATGCAAAAATTGTGAATGTAAAGCAATGGATGGCTGGAAGCTGACTTCAAGAGGAAGAAACTGTTTAGTGATATTTAGTTTTTAAGTTTGAGGTAACTTTTTTTTAATAACAAATTTTTAAAAATATAGCAAA

Coding sequence (CDS)

ATGGATGAAGACATGAAAGTTTCTCTTGACAAGCTTCCTGTTAAGCGCTTGGAGGCCATAGAAGAGAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCATGGCAATGGCAGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACTGTGGCTGGAATGACAAGGCCAAAACCATTACCTAATGAAGTTCTAGCAGATCTTGGAGTTTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAACTGGAAGGTTAAAAGGCAGCGAGTTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCATCCGTCTTTCGACCATCATCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTTTGGAACGTGATAAAAATGAGTCTACAAATCCTTCCAATCAGTCTTCGGTAAACAGGGAAAAGGAGTTTACAAATGACGATGAGTACATAAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGCGAGCAGGTGTTTGATTTGGTGAATCAGGAAGCATTCAATCCATCTGTTGGTATCAACGTGACTGGCATACGAGAAAATTACTTACAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTAGTGCCATCTGGTCAAAGTTCCCAAACTGTTGAAGGTGCAAATTCCGAGATTCTGGAAAATGCAAGTTTGCCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCACTTGAAAAGAAATTGCGGAATCCTAATCATATAACTTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCTGGTCAAGTTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCGCTGGCTCACAGAATGTTCGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTCTGGAAAGTCCCATTTCTTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCTTGGACGTTTTTTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCAAGGCTCGTACATCAGACGGTTATCAAATGAATAATGTAACCAAAACACAGTTTCTAACTAAAGTTGTTGTAAATGATGATTGCATTACCATTGAAGGAGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATTTATTCAACGAACAGATACAGCTGTGACTTGGCCGATCTTCCTGTTATAATTCTGTTGCAGGTTGCGAGCCAGATTATTCTTTGGCTTCACGAGGAGGCTCTAATCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTTGAACAAGGTGAAACACTCCGGCTGGTAGCCCACGTGGACCCAGAAGATCCTCAAGGATGTCTTTCATGGTGGTTGGTAATGGACGACGGATTGATGGAAGACAGGAAACTTAACTTTGAGACTTCAGATGTTGTACCTGAATACAGGAAGTTTTTGGGGCATTTATCTCTAGAAGTTTTGCATTCAACATTAATGGATTTGGTTAGTTTATGCAGTGGAGTTGGTGGTAGCCTATAA

Protein sequence

MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL*

Homology

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BLAST of CsGy5G030360 vs. ExPASy Swiss-Prot
Match: F4K460 (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 3.4e-214
Identity = 389/659 (59.03%), Postives = 500/659 (75.87%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAP 180
           L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFD 360
           +EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       E+A+L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYST 540
           I+     + ++ DG       KTQF TKVVV DDCI++E E  PNVVGL   +S +++S 
Sbjct: 481 IIPQGRSETQSPDG---KRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA   G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 656
           +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of CsGy5G030360 vs. NCBI nr
Match: XP_011656092.1 (mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011656093.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >KGN52676.1 hypothetical protein Csa_008469 [Cucumis sativus])

HSP 1 Score: 1319 bits (3414), Expect = 0.0
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. NCBI nr
Match: XP_008459609.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902444.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902445.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >TYK00455.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa])

HSP 1 Score: 1282 bits (3317), Expect = 0.0
Identity = 641/662 (96.83%), Postives = 653/662 (98.64%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSI+ARTSD YQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYS
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. NCBI nr
Match: KAA0039269.1 (mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa])

HSP 1 Score: 1277 bits (3305), Expect = 0.0
Identity = 641/663 (96.68%), Postives = 653/663 (98.49%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE 300
           ENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQV FDLVN E
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVVFDLVNHE 300

Query: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSL 360
           AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSL
Sbjct: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSL 360

Query: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420
           DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS
Sbjct: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420

Query: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILH 480
           GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILH
Sbjct: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480

Query: 481 PNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRY 540
           PNSI+ARTSD YQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRY
Sbjct: 481 PNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRY 540

Query: 541 SCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600
           SCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPE
Sbjct: 541 SCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600

Query: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 660
           DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVG 660

Query: 661 GSL 662
           GSL
Sbjct: 661 GSL 663

[Close]

BLAST of CsGy5G030360 vs. NCBI nr
Match: XP_038889914.1 (mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889915.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889916.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889917.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889918.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida])

HSP 1 Score: 1244 bits (3218), Expect = 0.0
Identity = 620/662 (93.66%), Postives = 644/662 (97.28%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLER KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Sbjct: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQS QTVEGAN+ IL+NA+LPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSI+A TSD +QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY 
Sbjct: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 
Sbjct: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 661

[Close]

BLAST of CsGy5G030360 vs. NCBI nr
Match: XP_022987637.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima])

HSP 1 Score: 1205 bits (3117), Expect = 0.0
Identity = 605/662 (91.39%), Postives = 629/662 (95.02%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNTCHSLCFGFLSGCNM 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLER KNESTN SNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VN+EA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDFVNREA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANTGILDNTNLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSND+PISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
            SI+ARTSD ++MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY 
Sbjct: 481 PSIQARTSDSHKMNSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
            QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GG
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL
Match: A0A0A0KXX2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=3659 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1319 bits (3414), Expect = 0.0
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL
Match: A0A1S4E2I2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=3 SV=1)

HSP 1 Score: 1282 bits (3317), Expect = 0.0
Identity = 641/662 (96.83%), Postives = 653/662 (98.64%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSI+ARTSD YQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYS
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL
Match: A0A5D3BMZ9 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1282 bits (3317), Expect = 0.0
Identity = 641/662 (96.83%), Postives = 653/662 (98.64%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
           NSI+ARTSD YQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYS
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL
Match: A0A5A7TDC1 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00600 PE=3 SV=1)

HSP 1 Score: 1277 bits (3305), Expect = 0.0
Identity = 641/663 (96.68%), Postives = 653/663 (98.49%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE 300
           ENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQV FDLVN E
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVVFDLVNHE 300

Query: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSL 360
           AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSL
Sbjct: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSL 360

Query: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420
           DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS
Sbjct: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420

Query: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILH 480
           GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILH
Sbjct: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480

Query: 481 PNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRY 540
           PNSI+ARTSD YQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRY
Sbjct: 481 PNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRY 540

Query: 541 SCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600
           SCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPE
Sbjct: 541 SCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600

Query: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 660
           DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVG 660

Query: 661 GSL 662
           GSL
Sbjct: 661 GSL 663

[Close]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL
Match: A0A6J1JAW7 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=3661 GN=LOC111485135 PE=3 SV=1)

HSP 1 Score: 1205 bits (3117), Expect = 0.0
Identity = 605/662 (91.39%), Postives = 629/662 (95.02%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
           KK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNTCHSLCFGFLSGCNM 240

Query: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
           ENPLER KNESTN SNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VN+EA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDFVNREA 300

Query: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANTGILDNTNLPFDSLD 360

Query: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
           GIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSND+PISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
            SI+ARTSD ++MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY 
Sbjct: 481 PSIQARTSDSHKMNSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
            QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GG
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of CsGy5G030360 vs. TAIR 10
Match: AT5G20170.1 (RNA polymerase II transcription mediators )

HSP 1 Score: 746.1 bits (1925), Expect = 2.4e-215
Identity = 389/659 (59.03%), Postives = 500/659 (75.87%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAP 180
           L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFD 360
           +EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       E+A+L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYST 540
           I+     + ++ DG       KTQF TKVVV DDCI++E E  PNVVGL   +S +++S 
Sbjct: 481 IIPQGRSETQSPDG---KRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA   G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 656
           +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

The following BLAST results are available for this feature:

BLAST of CsGy5G030360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K460	3.4e-214	59.03	Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy5G030360 vs. NCBI nr


Match Name	Identity	Description
XP_011656092.1	100.00	mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011...	[more]
XP_008459609.1	96.83	PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]...	[more]
KAA0039269.1	96.68	mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa...	[more]
XP_038889914.1	93.66	mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_0...	[more]
XP_022987637.1	91.39	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]	[more]

BLAST of CsGy5G030360 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KXX2	100.00	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=365...	[more]
A0A1S4E2I2	96.83	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BMZ9	96.83	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A5A7TDC1	96.68	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A6J1JAW7	91.39	Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=36...	[more]

BLAST of CsGy5G030360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20170.1	2.4e-215	59.03	RNA polymerase II transcription mediators	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019313	Mediator complex, subunit Med17	PFAM	PF10156	Med17	coord: 54..341 e-value: 1.3E-5 score: 24.1
IPR019313	Mediator complex, subunit Med17	PANTHER	PTHR13114	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17	coord: 1..653
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G030360.2	CsGy5G030360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity