CsGy5G029947 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTGGCTGGTTCATCATCTCATGCATCTCATTTGCCTTTTAATGTTTTCATAGGTTTCAACAGACATGAGGAAGACAACAAATACAAAAGTTCTACGAGGGATTTATATAAGATTTTGTGTATCCAGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGTGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGATAATGTGAGCGATAAGATTGTGAAAGCAATTGAAACTTACAGGTATAATTGGTTATATACATATCAAAACACCTTCTCCCGTATTACACCACCAAAAACTTAA ATGGTTTTGGCTGGTTCATCATCTCATGCATCTCATTTGCCTTTTAATGTTTTCATAGGTTTCAACAGACATGAGGAAGACAACAAATACAAAAGTTCTACGAGGGATTTATATAAGATTTTGTGTATCCAGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGTGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGATAATGTGAGCGATAAGATTGTGAAAGCAATTGAAACTTACAGGTATAATTGGTTATATACATATCAAAACACCTTCTCCCGTATTACACCACCAAAAACTTAA ATGGTTTTGGCTGGTTCATCATCTCATGCATCTCATTTGCCTTTTAATGTTTTCATAGGTTTCAACAGACATGAGGAAGACAACAAATACAAAAGTTCTACGAGGGATTTATATAAGATTTTGTGTATCCAGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGTGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGATAATGTGAGCGATAAGATTGTGAAAGCAATTGAAACTTACAGGTATAATTGGTTATATACATATCAAAACACCTTCTCCCGTATTACACCACCAAAAACTTAA MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTFSRITPPKT* Homology
BLAST of CsGy5G029947 vs. NCBI nr
Match: KGN52630.1 (hypothetical protein Csa_008636 [Cucumis sativus]) HSP 1 Score: 215 bits (548), Expect = 1.37e-70 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy5G029947 vs. NCBI nr
Match: KAA0039329.1 (TMV resistance protein N-like [Cucumis melo var. makuwa]) HSP 1 Score: 81.6 bits (200), Expect = 2.07e-15 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of CsGy5G029947 vs. NCBI nr
Match: AAU04758.1 (MRGH10 [Cucumis melo]) HSP 1 Score: 70.5 bits (171), Expect = 1.70e-11 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsGy5G029947 vs. NCBI nr
Match: XP_016902418.1 (PREDICTED: TMV resistance protein N-like [Cucumis melo]) HSP 1 Score: 70.5 bits (171), Expect = 1.73e-11 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsGy5G029947 vs. NCBI nr
Match: XP_038890436.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]) HSP 1 Score: 69.7 bits (169), Expect = 3.21e-11 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CsGy5G029947 vs. ExPASy TrEMBL
Match: A0A0A0KSQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647520 PE=4 SV=1) HSP 1 Score: 215 bits (548), Expect = 6.61e-71 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy5G029947 vs. ExPASy TrEMBL
Match: A0A5A7TDI7 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001270 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.00e-15 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of CsGy5G029947 vs. ExPASy TrEMBL
Match: Q5DMW3 (MRGH10 OS=Cucumis melo OX=3656 GN=MRGH10 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.24e-12 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsGy5G029947 vs. ExPASy TrEMBL
Match: A0A1S4E2G9 (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103498647 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.36e-12 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsGy5G029947 vs. ExPASy TrEMBL
Match: A0A7L9RVU7 (Resistance gene-like protein OS=Cucumis melo OX=3656 GN=Prv PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.78e-11 Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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