CsGy5G029545 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G029545
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	60S ribosomal protein L10-like
Location	Gy14Chr5: 32861490 .. 32863757 (+)
RNA-Seq Expression	CsGy5G029545
Synteny	CsGy5G029545

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTTCTCTGTGTCCAGTTCTTCTTCTTCTTGGACCGAACTCAAGAACCCGTTCACTACAAACTCTCCTTCAAATGCTCCTTGCCTGAATCTCTCTACATAATCTTCATGCTTTCCAAATTCTCAAAACCTTCTCAAAGGGTTCTTGAGGGTCTTCTTACCCTCAGGCTCAGACTCCATTTCACTCATCATCCGATCACCCACTCCAATGCCAATCCTCTTCGAGATCCGTTCATCGCACATTCCTTCTCTTCAGCTCCCTCTTTCCAATCGAAATTCCCTTCAAAACCCATCTCTTCCAATGTTGGTTTGTCCCAATTCCTCTATTCTCCCAAGCTAACTGCTGGAAATTCTTCTCTGGTTACTAAATTGAATGCCCATCATTCTGCTTCTAGGTTTAGATTCTTCTCTGTTAAAATTCCTCGTTTTGGGGGTCAAATCAATGGAAATTTCGCTAAGAAGGTTATTGATAAGCCTGCTGCGGCTGTTAGTTCTGCATTTTCGAGGTATCGGGAAGCCATTGGGTTGCAGATTGAGGCTTTCTTCAAGAGAAATTATCTTGTTCTATTGGGGTTTGCAGCAGCTTTAATTTGTGCATTGCTTTGGAAGATTATGTTTGGTATTGCCAACACCTTTGTTGGGCTCTCTGAAGGCATGGCTAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTACTGTGAGTTTTCTCTATTATCTCTTTTCCCTGTGTTACCTTCATTTTCTTAGAAAATGGATTTATTGATCCTTTTGTTTGGCTTGTTAATAGTTTTGTGTATAGCTTTTGTTTGTTTACTTGTCATCAGTGGAAATATGGTGATAAGTTCCTTGGGTACCCGGAAGAGATGTGATTAAGATCACAAATTATGCGACTGGTATAGAAATTATTCTGGCTTAGGAGCAACTCTCTCTCTTTTTTTTTTTTTTCCTTTCTTCCCTTAGGTTCTGTTGGATTTTTAAATATTCTGGGACTGTTATGAAATATAAGTAAGGAAAGAAAATGTACTGTTTGTGACCTTGTACGGCTCAGCGTCTCTAAATGGAGCGTTGAACACAAGTTTTCTACGAACTACTCTACTTGAGAGCTCAAAGGACACTGTTATAAAACCTATAGAATAAATCCTGTTCAAGTGAGGTTGTACTGTGAACTACTCTACTTATGCGGTCAGTTTAGATTGGAGGACTTTTGTTTGGCTCTCTTTGTTCTTTGGGGGTGCTTGGGGCGTTGGGTTGAGTTCTAAAGTCTCTGGAGTTAAAAAGTCTGAGTTTAGGGTGTAGAGTTGTTTAATTGGAGTTAAGAAGCCTATGTTCGTTGTTTAGTCTGTGGTTAGGAACCATTAGACTTTAGAGTGAAGGGGAGAGAGAGAGAGAGATTGAGTTTCTCGATGAACTTCAAAAATGAATACTGTTGAGGTTAGTGGAATTGAGTTATTTAAAACTAACGAATGAAGTTGGTAGGCCCAACATGCCCTTAGGTTGTTTTGCTTGGCTTTTCAGTATGGAATGAGATGACATCACCTTCTCGTTTCCTATTAAAATACACTACTAGCCTTAGCTAGTCCACTGACAGGCTCACAACTTAATGCTTTTATGAAGGTACATACGTGCTATCTCAAAATTTATTTAGCTTTGATTTTTGTGATTTTTAGTTTTAAGCTCCTAGTCAAGGAATTTGAAGGTAAACCTACACACAAGCAGAGAAAATTTTTATTTCTATATGAATCCTGAATCCATTTGTGCTTCCGTTGGGACCTATCTTTCCTGTTTGTTATGACCTCTTCTCCTCAACCCTGTTTGTCAAAATTGAATGTTATTTTTTTCTTTATGAAGAATTATAACCTACTTAGGTGCAAGAAAAAAAAAATTATAGCCTACTTTGTGGATTGCCAATGTTGAATGGTATCTGCTCTTTTTCCATTTCAAGGGCCTCTATATGCGCTCGAGATTCACAGTCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCAGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACTTGAGAGCTTATGTTATGTCAGGAGGCGGGTTCACGCTGAAAAATTTCGCACCAAACCGTAGGAGCAAGCGATGCTTTCTTATTTTTCCAATCAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGGTTTGTCTTTTTGCTTGCCACTTTCTTTATGTTTAACTATCAC

mRNA sequence

CTTCTCTTCTCTGTGTCCAGTTCTTCTTCTTCTTGGACCGAACTCAAGAACCCGTTCACTACAAACTCTCCTTCAAATGCTCCTTGCCTGAATCTCTCTACATAATCTTCATGCTTTCCAAATTCTCAAAACCTTCTCAAAGGGTTCTTGAGGGTCTTCTTACCCTCAGGCTCAGACTCCATTTCACTCATCATCCGATCACCCACTCCAATGCCAATCCTCTTCGAGATCCGTTCATCGCACATTCCTTCTCTTCAGCTCCCTCTTTCCAATCGAAATTCCCTTCAAAACCCATCTCTTCCAATGTTGGTTTGTCCCAATTCCTCTATTCTCCCAAGCTAACTGCTGGAAATTCTTCTCTGGTTACTAAATTGAATGCCCATCATTCTGCTTCTAGGTTTAGATTCTTCTCTGTTAAAATTCCTCGTTTTGGGGGTCAAATCAATGGAAATTTCGCTAAGAAGGTTATTGATAAGCCTGCTGCGGCTGTTAGTTCTGCATTTTCGAGGTATCGGGAAGCCATTGGGTTGCAGATTGAGGCTTTCTTCAAGAGAAATTATCTTGTTCTATTGGGGTTTGCAGCAGCTTTAATTTGTGCATTGCTTTGGAAGATTATGTTTGGTATTGCCAACACCTTTGTTGGGCTCTCTGAAGGCATGGCTAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTACTGGCCTCTATATGCGCTCGAGATTCACAGTCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCAGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACTTGAGAGCTTATGTTATGTCAGGAGGCGGGTTCACGCTGAAAAATTTCGCACCAAACCGTAGGAGCAAGCGATGCTTTCTTATTTTTCCAATCAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGGTTTGTCTTTTTGCTTGCCACTTTCTTTATGTTTAACTATCAC

Coding sequence (CDS)

ATGCTTTCCAAATTCTCAAAACCTTCTCAAAGGGTTCTTGAGGGTCTTCTTACCCTCAGGCTCAGACTCCATTTCACTCATCATCCGATCACCCACTCCAATGCCAATCCTCTTCGAGATCCGTTCATCGCACATTCCTTCTCTTCAGCTCCCTCTTTCCAATCGAAATTCCCTTCAAAACCCATCTCTTCCAATGTTGGTTTGTCCCAATTCCTCTATTCTCCCAAGCTAACTGCTGGAAATTCTTCTCTGGTTACTAAATTGAATGCCCATCATTCTGCTTCTAGGTTTAGATTCTTCTCTGTTAAAATTCCTCGTTTTGGGGGTCAAATCAATGGAAATTTCGCTAAGAAGGTTATTGATAAGCCTGCTGCGGCTGTTAGTTCTGCATTTTCGAGGTATCGGGAAGCCATTGGGTTGCAGATTGAGGCTTTCTTCAAGAGAAATTATCTTGTTCTATTGGGGTTTGCAGCAGCTTTAATTTGTGCATTGCTTTGGAAGATTATGTTTGGTATTGCCAACACCTTTGTTGGGCTCTCTGAAGGCATGGCTAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTACTGGCCTCTATATGCGCTCGAGATTCACAGTCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCAGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACTTGAGAGCTTATGTTATGTCAGGAGGCGGGTTCACGCTGAAAAATTTCGCACCAAACCGTAGGAGCAAGCGATGCTTTCTTATTTTTCCAATCAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGGTTTGTCTTTTTGCTTGCCACTTTCTTTATGTTTAA

Protein sequence

MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSKPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLSEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQVCLFACHFLYV*

Homology

[Close]

BLAST of CsGy5G029545 vs. NCBI nr
Match: XP_004141508.1 (uncharacterized protein LOC101215996 [Cucumis sativus] >KGN52588.1 hypothetical protein Csa_009165 [Cucumis sativus])

HSP 1 Score: 561 bits (1447), Expect = 6.94e-200
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK
Sbjct: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS
Sbjct: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. NCBI nr
Match: XP_008459482.1 (PREDICTED: uncharacterized protein LOC103498604 [Cucumis melo])

HSP 1 Score: 541 bits (1393), Expect = 1.16e-191
Identity = 279/290 (96.21%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSK SKPSQRVLEGLLTLRLRLHFTHHPIT+SNANPLRDPFIA+SFSSAPSFQSKFPSK
Sbjct: 1   MLSKISKPSQRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSK 60

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PIS +VGLSQFLYSPKLTAGNSSLVTKLNAH SASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 61  PISYDVGLSQFLYSPKLTAGNSSLVTKLNAHRSASRFRFFSVKIPRFGGQINGNFAKKVI 120

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREA+GLQIEAFFKRNYLVLLGF AALICALLW+IMFGIANTFVGLS
Sbjct: 121 DKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLS 180

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLY+RSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 181 EGMAKYGFLALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 LRAYVMSGGGFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. NCBI nr
Match: KAA0039368.1 (60S ribosomal protein L10-like [Cucumis melo var. makuwa] >TYK00552.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa])

HSP 1 Score: 543 bits (1400), Expect = 6.05e-189
Identity = 280/290 (96.55%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSK SKPSQRVLEGLLTLRLRLHFTHHPIT+SNANPLRDPFIA+SFSSAPSFQSKFPSK
Sbjct: 252 MLSKISKPSQRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSK 311

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PISSNVGLSQFLYSPKLTAGNSSLVTKLN H SASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 312 PISSNVGLSQFLYSPKLTAGNSSLVTKLNVHRSASRFRFFSVKIPRFGGQINGNFAKKVI 371

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREA+GLQIEAFFKRNYLVLLGF AALICALLW+IMFGIANTFVGLS
Sbjct: 372 DKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLS 431

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLY+RSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 432 EGMAKYGFLALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 491

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 492 LRAYVMSGGGFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 541

[Close]

BLAST of CsGy5G029545 vs. NCBI nr
Match: XP_038890647.1 (uncharacterized protein LOC120080153 [Benincasa hispida])

HSP 1 Score: 503 bits (1296), Expect = 6.76e-177
Identity = 259/290 (89.31%), Postives = 271/290 (93.45%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLS+ SKPSQRV EGLL LRLRLHF+HHPI+ SNANPLRDP IA+SFS+  SFQSKFPSK
Sbjct: 1   MLSRISKPSQRVAEGLLALRLRLHFSHHPISSSNANPLRDPIIANSFSTFSSFQSKFPSK 60

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PI SN+GLSQ LYSPKLTAGNSSL T+ N + SASRFRFFSVKIP FGG+INGNFAKKV+
Sbjct: 61  PIFSNLGLSQILYSPKLTAGNSSLATQFNVYRSASRFRFFSVKIPGFGGKINGNFAKKVL 120

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPA AVSSAFSRYREAIGLQIEAFFKRNYLVLLGF AAL+CALLW+IMFGIANTFVGLS
Sbjct: 121 DKPATAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVGLS 180

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAF GLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 181 EGMAKYGFLALSSAIVAFAGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKN  PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 LRAYVMSGGGFTLKNLTPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. NCBI nr
Match: XP_022938904.1 (uncharacterized protein LOC111444978 [Cucurbita moschata] >KAG6578493.1 hypothetical protein SDJN03_22941, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486 bits (1250), Expect = 6.75e-170
Identity = 252/291 (86.60%), Postives = 269/291 (92.44%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPL-RDPFIAHSFSSAPSFQSKFPS 60
           MLSKFSKPS+RVLEGLL LR+RLHF+HHP++ SN  PL RDP I +SFSS+ SFQSKF S
Sbjct: 1   MLSKFSKPSKRVLEGLLDLRIRLHFSHHPVSSSNGRPLLRDPIIRNSFSSS-SFQSKFSS 60

Query: 61  KPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKV 120
            PISSN GLSQ LY+PK+TAGNSS+ TKLNA+ SASRFRFFSVK P FGGQINGNFAKKV
Sbjct: 61  NPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQINGNFAKKV 120

Query: 121 IDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGL 180
           +DKPAAAV SAFSRYREAIGLQIEAFF+RNYLVLLGF AAL+CALLW+IMFGIANTFVG+
Sbjct: 121 LDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGIANTFVGI 180

Query: 181 SEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240
           SEGMAKYGFLALSSAIVAF GLYMRSRFT+NPDRVYRMAMRKLNTSAGILEVMGAPLTGS
Sbjct: 181 SEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240

Query: 241 DLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           DLRAYVMSGGG TLKNF PN RSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 DLRAYVMSGGGLTLKNFTPNHRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL
Match: A0A0A0KSP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G645130 PE=4 SV=1)

HSP 1 Score: 561 bits (1447), Expect = 3.36e-200
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK
Sbjct: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS
Sbjct: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL
Match: A0A1S3CA96 (uncharacterized protein LOC103498604 OS=Cucumis melo OX=3656 GN=LOC103498604 PE=4 SV=1)

HSP 1 Score: 541 bits (1393), Expect = 5.62e-192
Identity = 279/290 (96.21%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSK SKPSQRVLEGLLTLRLRLHFTHHPIT+SNANPLRDPFIA+SFSSAPSFQSKFPSK
Sbjct: 1   MLSKISKPSQRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSK 60

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PIS +VGLSQFLYSPKLTAGNSSLVTKLNAH SASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 61  PISYDVGLSQFLYSPKLTAGNSSLVTKLNAHRSASRFRFFSVKIPRFGGQINGNFAKKVI 120

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREA+GLQIEAFFKRNYLVLLGF AALICALLW+IMFGIANTFVGLS
Sbjct: 121 DKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLS 180

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLY+RSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 181 EGMAKYGFLALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 LRAYVMSGGGFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL
Match: A0A5D3BP90 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001650 PE=3 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 2.93e-189
Identity = 280/290 (96.55%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPLRDPFIAHSFSSAPSFQSKFPSK 60
           MLSK SKPSQRVLEGLLTLRLRLHFTHHPIT+SNANPLRDPFIA+SFSSAPSFQSKFPSK
Sbjct: 252 MLSKISKPSQRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSK 311

Query: 61  PISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVI 120
           PISSNVGLSQFLYSPKLTAGNSSLVTKLN H SASRFRFFSVKIPRFGGQINGNFAKKVI
Sbjct: 312 PISSNVGLSQFLYSPKLTAGNSSLVTKLNVHRSASRFRFFSVKIPRFGGQINGNFAKKVI 371

Query: 121 DKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLS 180
           DKPAAAVSSAFSRYREA+GLQIEAFFKRNYLVLLGF AALICALLW+IMFGIANTFVGLS
Sbjct: 372 DKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLS 431

Query: 181 EGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 240
           EGMAKYGFLALSSAIVAFTGLY+RSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD
Sbjct: 432 EGMAKYGFLALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSD 491

Query: 241 LRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           LRAYVMSGGGFTLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 492 LRAYVMSGGGFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 541

[Close]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL
Match: A0A6J1FFG8 (uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC111444978 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 3.27e-170
Identity = 252/291 (86.60%), Postives = 269/291 (92.44%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPL-RDPFIAHSFSSAPSFQSKFPS 60
           MLSKFSKPS+RVLEGLL LR+RLHF+HHP++ SN  PL RDP I +SFSS+ SFQSKF S
Sbjct: 1   MLSKFSKPSKRVLEGLLDLRIRLHFSHHPVSSSNGRPLLRDPIIRNSFSSS-SFQSKFSS 60

Query: 61  KPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKV 120
            PISSN GLSQ LY+PK+TAGNSS+ TKLNA+ SASRFRFFSVK P FGGQINGNFAKKV
Sbjct: 61  NPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQINGNFAKKV 120

Query: 121 IDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGL 180
           +DKPAAAV SAFSRYREAIGLQIEAFF+RNYLVLLGF AAL+CALLW+IMFGIANTFVG+
Sbjct: 121 LDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGIANTFVGI 180

Query: 181 SEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240
           SEGMAKYGFLALSSAIVAF GLYMRSRFT+NPDRVYRMAMRKLNTSAGILEVMGAPLTGS
Sbjct: 181 SEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240

Query: 241 DLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           DLRAYVMSGGG TLKNF PN RSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 DLRAYVMSGGGLTLKNFTPNHRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290

[Close]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL
Match: A0A6J1K0Y8 (uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 4.98e-166
Identity = 249/291 (85.57%), Postives = 266/291 (91.41%), Query Frame = 0


Query: 1   MLSKFSKPSQRVLEGLLTLRLRLHFTHHPITHSNANPL-RDPFIAHSFSSAPSFQSKFPS 60
           MLSKFSKPS+RVLEGLL LR+RLHF+HHP++ SNA PL RDP I +SFSS+ SFQSKF  
Sbjct: 1   MLSKFSKPSKRVLEGLLDLRIRLHFSHHPVSSSNARPLLRDPIIRNSFSSS-SFQSKF-- 60

Query: 61  KPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKV 120
              SSN GLSQ LY+PK+ AGNSS+ TKLNA+ SASRFRFFSVK P FGGQINGNFAKKV
Sbjct: 61  ---SSNPGLSQILYAPKVAAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQINGNFAKKV 120

Query: 121 IDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGL 180
           +DKP AAV SAFSRYREAIGLQIEAFF+RNYLVLLGF AAL+CALLW+IMFG+ANTFVGL
Sbjct: 121 LDKPTAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGVANTFVGL 180

Query: 181 SEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240
           SEGMAKYGFLALSSAIVAF GLYMRSRFT+NPDRVYRMAMRKLNTSAGILEVMGAPLTGS
Sbjct: 181 SEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGS 240

Query: 241 DLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 290
           DLRAYVMSGGG TLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ
Sbjct: 241 DLRAYVMSGGGLTLKNFTPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 285

[Close]

BLAST of CsGy5G029545 vs. TAIR 10
Match: AT2G40800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 308.1 bits (788), Expect = 7.6e-84
Identity = 174/292 (59.59%), Postives = 210/292 (71.92%), Query Frame = 0


Query: 7   KPSQ-RVLEGLLTLRLRLHFTH-HPITHSNANPLRDPFIAHSFSSAPSFQSKF-----PS 66
           KPS  + ++G     +RLH+T  +P+T   +NP      A   +     Q KF      S
Sbjct: 3   KPSDFKAIQGF----IRLHYTRVNPVTIGRSNPSALSSPAIPSNGVSQLQPKFSFHSLSS 62

Query: 67  KPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHS-ASRFRFFSVKIPRFGGQINGNFAKK 126
           KP S NVGL Q L SPKL       +     + S AS FR  S K   F  +++G+FA+K
Sbjct: 63  KPTSKNVGLYQILSSPKLNPKLQQALGLPRVNVSFASAFRLVSTKSSGF-RKVDGSFARK 122

Query: 127 VIDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVG 186
           V+DKP  AVSS F+RYREAIGL I+AF+K+N LV+ G A   +C  LW+IMFGIA+TFVG
Sbjct: 123 VVDKPVKAVSSTFARYREAIGLHIDAFWKKNSLVVFGAAGVFVCIFLWRIMFGIASTFVG 182

Query: 187 LSEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTG 246
           LSEGMAKYGFLALSSAIVAF+GLY+RSRFT+NPD+VYRM MRK+NT+A ILEVMGAPL+G
Sbjct: 183 LSEGMAKYGFLALSSAIVAFSGLYLRSRFTINPDKVYRMTMRKINTAAEILEVMGAPLSG 242

Query: 247 SDLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 291
           SDLRAYVMSGGG T K F P  RSKRCFL+FP++GSE+KGLVSVEVKKKKGQ
Sbjct: 243 SDLRAYVMSGGGITFKKFKPTIRSKRCFLLFPVQGSEQKGLVSVEVKKKKGQ 289

[Close]

BLAST of CsGy5G029545 vs. TAIR 10
Match: AT3G56430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in 196 species: Archae - 12; Bacteria - 170; Metazoa - 996; Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes - 1428 (source: NCBI BLink). )

HSP 1 Score: 295.8 bits (756), Expect = 3.9e-80
Identity = 157/243 (64.61%), Postives = 188/243 (77.37%), Query Frame = 0


Query: 52  SFQSKFPSKPISSNVGLSQFLYSPKLTAG----NSSLVTKLNAHHSASRFRFFSVKIPRF 111
           SF S F S+P S NVGLSQ L SPKL  G      +LV      +  S FR FS    R 
Sbjct: 85  SFHS-FLSRPTSKNVGLSQILPSPKLVPGLQNCGVALVKPRVNMNFVSAFRLFSSSGFR- 144

Query: 112 GGQINGNFAKKVIDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWK 171
             +++GNFA+KV+DKP  AVSS F+RYR A+GL ++AF+K+N L++ G  A  +C  LW+
Sbjct: 145 --KVDGNFARKVVDKPIKAVSSTFARYRMALGLHVDAFWKKNNLLVFGAGAVFVCIFLWR 204

Query: 172 IMFGIANTFVGLSEGMAKYGFLALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAG 231
           +MFGIA+TFVGLSEGMAKYGFLALSSAIVAF GLY+R+RFT+NPD+VYR+ MRKLNT+A 
Sbjct: 205 VMFGIASTFVGLSEGMAKYGFLALSSAIVAFAGLYLRARFTINPDKVYRITMRKLNTAAD 264

Query: 232 ILEVMGAPLTGSDLRAYVMSGGGFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKK 291
           +LEVMGAPL GSDLRAYVMSGGG T K F P  R+KRCFL+FP++GSERKGLVSVEVKKK
Sbjct: 265 VLEVMGAPLAGSDLRAYVMSGGGITFKKFKPTIRNKRCFLLFPVQGSERKGLVSVEVKKK 323

The following BLAST results are available for this feature:

BLAST of CsGy5G029545 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G029545 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141508.1	6.94e-200	100.00	uncharacterized protein LOC101215996 [Cucumis sativus] >KGN52588.1 hypothetical ...	[more]
XP_008459482.1	1.16e-191	96.21	PREDICTED: uncharacterized protein LOC103498604 [Cucumis melo]	[more]
KAA0039368.1	6.05e-189	96.55	60S ribosomal protein L10-like [Cucumis melo var. makuwa] >TYK00552.1 60S riboso...	[more]
XP_038890647.1	6.76e-177	89.31	uncharacterized protein LOC120080153 [Benincasa hispida]	[more]
XP_022938904.1	6.75e-170	86.60	uncharacterized protein LOC111444978 [Cucurbita moschata] >KAG6578493.1 hypothet...	[more]

BLAST of CsGy5G029545 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSP6	3.36e-200	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G645130 PE=4 SV=1	[more]
A0A1S3CA96	5.62e-192	96.21	uncharacterized protein LOC103498604 OS=Cucumis melo OX=3656 GN=LOC103498604 PE=...	[more]
A0A5D3BP90	2.93e-189	96.55	60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1FFG8	3.27e-170	86.60	uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1K0Y8	4.98e-166	85.57	uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167...	[more]

BLAST of CsGy5G029545 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40800.1	7.6e-84	59.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56430.1	3.9e-80	64.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36354	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 8..290
None	No IPR available	PANTHER	PTHR36354:SF2	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 8..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G029545.1	CsGy5G029545.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome