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CsGy5G028570 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTCTTTGTTTTCTCTCCTGAACGAAACGACGACTTTTCTCCCGACCTCCAAGCTCCGGTGAAGGATTTCAAGACTCTTCAACTTGACCCGAATTCTGATATTGCACCATTGGTTCTTCATCGCCTCTTTCCACCGCTGCTATTTCTGCGTTTTTTCTTTCATTTTCTATTCCAGGTACACACATTCTTCTAATTTTGCTCTGAATTGTGGGGATTCAATTCAATTAGTACTTTTAATGGCTTCAGTTGCTGATTATATGGGAATTCGTTAGATTTTTATGTGTTTTCATTCTAAATCTGATTGGGCGAAAGAAGAATTTGTATATAGCGAGTAGTTGTTTTTCATTAGATTGAAATGAATTATTTAGGATTGAAGAAGGAAAATCCCTTCTCATCTCTCTCCTTCAATCTCTTCTCTCTTCCTCTCTCATGAGTGAACGGCGGTCCCTTTCGAACACCCATGAACAGATCTGAGACCCACGCACATGAACACGCACGAACATGAAGTTCTCTACGAGTTGAGTAAATAGCGAAAGCTTAGTTGGCTTTAATACATTTGTTCAATTAAGTATGAAGTATTACTTATTAGTTTAGGCTGAAATTTGGGGTCTTTACATTGAAAACCATGTGAAAATTGTAGTTTTCATCCTCGTTTTGATGATTTTTTTACTGTATTTGATTCTTGATTTCAAAGGTGGCTGATTCACTTGAAATTTGAAGACTTCATTCTTGTTGATATTCACTGTCATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTATTGATGAAATTTTTTGTTTCACAGTTTTTTGAGTGCTGTTCTTTGTCATTTATTTTCATGGTATGCAAAGTGTAGTCGTTTGGCTTTTGTTTGTTGAGCTTAACTCATCATTCAAGAACCCATATAAGACTTGGTGCGAACAGAATCTTCTTAGTTTTGGTCGAATGGTATCATTGTTAGTCACAACAGCTTGAAGCTGCCACCTGGATTGTGATAATCTAATTCATAAATAGTGTTAAAAGACCATCGATGTCAATTTTAGGTATCTTTCCCTATTCGGGGAGGAGCTTAGACAATATCAAGAGGAGAATGTTGAAAGGAGTGCTTAATCAATCTGGATAGGGAAAATAGGATATTTTAGAAATTCAATAATGAATAGTTTAGATTTTAGTTTGACACCAAAAAACTTGTGATATGTGGTCTTGCTATGAGCCATTCGAGTTTATCTCGATGGTATATTCCAGCCATAAGCAAGCACGTACCACAGTTGCATGAGATGCACAAACCAAAACTAAATTAACAGTGACTTTAGTTTGGTAAAGCACAAAACTATTAACGAGTACTTTAAGTATAAAGTGGTCCATAGGTTAGAAATTTGTTGAATATCGATATTTTCATTATGGAACTCTAATATTCTTTCAACTATCAGGCTTCCTACTAAAGGAATAATTACAATTTTTAGTAAAATCTTGTCGCACCATCGACTTTGGCAATGGGAGTATATTCAATTCTTTGGCCGACTCTTTCTATATTCTATCATTATACTTATTATACTTGACCATAAAGCCACTGGAATACAAAACCAACATGTGACTGTTAAAACCAAATCACAAACAACCTGCAAAGTTTTGTTATCGTTCAATATGTCATCAGTAGAAATGCCGTTGATTCATCCTGTTCATGAAGTTTGATAATCTGAACAACTTTTGGTTTGTTGATGCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAAGCGTTCCTATCCCAATGGTGTATGCTTGTCCCATCTCTCTTTCAATGTAAAAACTATCATATAAAAGTCAGAAAATGGTTTGTACAGAATCACGTCTCTTGAATTTGTAACGTATTTGTCCTTTGTTTCTTCTCATTCTCATAGGTTGTGTAGGGTCAGGAAAATGATAAATGATTTAGCTTTAATTCTTTAGCTGGACAAGTCTTGTAGTTAAACTCAAAATCTTTATGCCTATGAGAATACTTGCCAGTGAGGTTATTCCATATGACAAA ATCTTCTTTGTTTTCTCTCCTGAACGAAACGACGACTTTTCTCCCGACCTCCAAGCTCCGGTGAAGGATTTCAAGACTCTTCAACTTGACCCGAATTCTGATATTGCACCATTGGTTCTTCATCGCCTCTTTCCACCGCTGCTATTTCTGCGTTTTTTCTTTCATTTTCTATTCCAGGTACACACATTCTTCTAATTTTGCTCTGAATTGTGGGGATTCAATTCAATTAGTACTTTTAATGGCTTCAGTTGCTGATTATATGGGAATTCGTTAGATTTTTATGTGTTTTCATTCTAAATCTGATTGGGCGAAAGAAGAATTTGTATATAGCGAGTAGTTGTTTTTCATTAGATTGAAATGAATTATTTAGGATTGAAGAAGGAAAATCCCTTCTCATCTCTCTCCTTCAATCTCTTCTCTCTTCCTCTCTCATGAGTGAACGGCGGTCCCTTTCGAACACCCATGAACAGATCTGAGACCCACGCACATGAACACGCACGAACATGAAGTTCTCTACGAGTGGCTGATTCACTTGAAATTTGAAGACTTCATTCTTGTTGATATTCACTGTCATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAAGCGTTCCTATCCCAATGGTGTATGCTTGTCCCATCTCTCTTTCAATGTAAAAACTATCATATAAAAGTCAGAAAATGGTTTGTACAGAATCACGTCTCTTGAATTTGTAACGTATTTGTCCTTTGTTTCTTCTCATTCTCATAGGTTGTGTAGGGTCAGGAAAATGATAAATGATTTAGCTTTAATTCTTTAGCTGGACAAGTCTTGTAGTTAAACTCAAAATCTTTATGCCTATGAGAATACTTGCCAGTGAGGTTATTCCATATGACAAA ATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAA MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY* Homology
BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14 Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5E975 (Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14 Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14 Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_004141452.1 (transmembrane protein 230 [Cucumis sativus] >KGN52486.1 hypothetical protein Csa_008216 [Cucumis sativus]) HSP 1 Score: 234 bits (597), Expect = 1.28e-77 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo]) HSP 1 Score: 223 bits (567), Expect = 4.84e-73 Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220 bits (560), Expect = 5.66e-72 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0
BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_022939930.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembrane protein 230-like [Cucurbita moschata] >XP_022993688.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993689.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993690.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023549544.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023549545.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6578563.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219 bits (557), Expect = 1.62e-71 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218 bits (556), Expect = 2.31e-71 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A0A0KXG1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_5G637760 PE=3 SV=1) HSP 1 Score: 234 bits (597), Expect = 6.21e-78 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1) HSP 1 Score: 223 bits (567), Expect = 2.34e-73 Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1) HSP 1 Score: 219 bits (557), Expect = 7.86e-72 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1FP54 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=1) HSP 1 Score: 219 bits (557), Expect = 7.86e-72 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1) HSP 1 Score: 218 bits (556), Expect = 1.12e-71 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsGy5G028570 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 161.8 bits (408), Expect = 3.4e-40 Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CsGy5G028570 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of CsGy5G028570 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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