CsGy5G028570 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G028570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transmembrane protein 230
Location	Gy14Chr5: 32158870 .. 32161188 (-)
RNA-Seq Expression	CsGy5G028570
Synteny	CsGy5G028570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCTTTGTTTTCTCTCCTGAACGAAACGACGACTTTTCTCCCGACCTCCAAGCTCCGGTGAAGGATTTCAAGACTCTTCAACTTGACCCGAATTCTGATATTGCACCATTGGTTCTTCATCGCCTCTTTCCACCGCTGCTATTTCTGCGTTTTTTCTTTCATTTTCTATTCCAGGTACACACATTCTTCTAATTTTGCTCTGAATTGTGGGGATTCAATTCAATTAGTACTTTTAATGGCTTCAGTTGCTGATTATATGGGAATTCGTTAGATTTTTATGTGTTTTCATTCTAAATCTGATTGGGCGAAAGAAGAATTTGTATATAGCGAGTAGTTGTTTTTCATTAGATTGAAATGAATTATTTAGGATTGAAGAAGGAAAATCCCTTCTCATCTCTCTCCTTCAATCTCTTCTCTCTTCCTCTCTCATGAGTGAACGGCGGTCCCTTTCGAACACCCATGAACAGATCTGAGACCCACGCACATGAACACGCACGAACATGAAGTTCTCTACGAGTTGAGTAAATAGCGAAAGCTTAGTTGGCTTTAATACATTTGTTCAATTAAGTATGAAGTATTACTTATTAGTTTAGGCTGAAATTTGGGGTCTTTACATTGAAAACCATGTGAAAATTGTAGTTTTCATCCTCGTTTTGATGATTTTTTTACTGTATTTGATTCTTGATTTCAAAGGTGGCTGATTCACTTGAAATTTGAAGACTTCATTCTTGTTGATATTCACTGTCATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTATTGATGAAATTTTTTGTTTCACAGTTTTTTGAGTGCTGTTCTTTGTCATTTATTTTCATGGTATGCAAAGTGTAGTCGTTTGGCTTTTGTTTGTTGAGCTTAACTCATCATTCAAGAACCCATATAAGACTTGGTGCGAACAGAATCTTCTTAGTTTTGGTCGAATGGTATCATTGTTAGTCACAACAGCTTGAAGCTGCCACCTGGATTGTGATAATCTAATTCATAAATAGTGTTAAAAGACCATCGATGTCAATTTTAGGTATCTTTCCCTATTCGGGGAGGAGCTTAGACAATATCAAGAGGAGAATGTTGAAAGGAGTGCTTAATCAATCTGGATAGGGAAAATAGGATATTTTAGAAATTCAATAATGAATAGTTTAGATTTTAGTTTGACACCAAAAAACTTGTGATATGTGGTCTTGCTATGAGCCATTCGAGTTTATCTCGATGGTATATTCCAGCCATAAGCAAGCACGTACCACAGTTGCATGAGATGCACAAACCAAAACTAAATTAACAGTGACTTTAGTTTGGTAAAGCACAAAACTATTAACGAGTACTTTAAGTATAAAGTGGTCCATAGGTTAGAAATTTGTTGAATATCGATATTTTCATTATGGAACTCTAATATTCTTTCAACTATCAGGCTTCCTACTAAAGGAATAATTACAATTTTTAGTAAAATCTTGTCGCACCATCGACTTTGGCAATGGGAGTATATTCAATTCTTTGGCCGACTCTTTCTATATTCTATCATTATACTTATTATACTTGACCATAAAGCCACTGGAATACAAAACCAACATGTGACTGTTAAAACCAAATCACAAACAACCTGCAAAGTTTTGTTATCGTTCAATATGTCATCAGTAGAAATGCCGTTGATTCATCCTGTTCATGAAGTTTGATAATCTGAACAACTTTTGGTTTGTTGATGCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAAGCGTTCCTATCCCAATGGTGTATGCTTGTCCCATCTCTCTTTCAATGTAAAAACTATCATATAAAAGTCAGAAAATGGTTTGTACAGAATCACGTCTCTTGAATTTGTAACGTATTTGTCCTTTGTTTCTTCTCATTCTCATAGGTTGTGTAGGGTCAGGAAAATGATAAATGATTTAGCTTTAATTCTTTAGCTGGACAAGTCTTGTAGTTAAACTCAAAATCTTTATGCCTATGAGAATACTTGCCAGTGAGGTTATTCCATATGACAAA

mRNA sequence

ATCTTCTTTGTTTTCTCTCCTGAACGAAACGACGACTTTTCTCCCGACCTCCAAGCTCCGGTGAAGGATTTCAAGACTCTTCAACTTGACCCGAATTCTGATATTGCACCATTGGTTCTTCATCGCCTCTTTCCACCGCTGCTATTTCTGCGTTTTTTCTTTCATTTTCTATTCCAGGTACACACATTCTTCTAATTTTGCTCTGAATTGTGGGGATTCAATTCAATTAGTACTTTTAATGGCTTCAGTTGCTGATTATATGGGAATTCGTTAGATTTTTATGTGTTTTCATTCTAAATCTGATTGGGCGAAAGAAGAATTTGTATATAGCGAGTAGTTGTTTTTCATTAGATTGAAATGAATTATTTAGGATTGAAGAAGGAAAATCCCTTCTCATCTCTCTCCTTCAATCTCTTCTCTCTTCCTCTCTCATGAGTGAACGGCGGTCCCTTTCGAACACCCATGAACAGATCTGAGACCCACGCACATGAACACGCACGAACATGAAGTTCTCTACGAGTGGCTGATTCACTTGAAATTTGAAGACTTCATTCTTGTTGATATTCACTGTCATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAAGCGTTCCTATCCCAATGGTGTATGCTTGTCCCATCTCTCTTTCAATGTAAAAACTATCATATAAAAGTCAGAAAATGGTTTGTACAGAATCACGTCTCTTGAATTTGTAACGTATTTGTCCTTTGTTTCTTCTCATTCTCATAGGTTGTGTAGGGTCAGGAAAATGATAAATGATTTAGCTTTAATTCTTTAGCTGGACAAGTCTTGTAGTTAAACTCAAAATCTTTATGCCTATGAGAATACTTGCCAGTGAGGTTATTCCATATGACAAA

Coding sequence (CDS)

ATGGCATCTAGACGGAATGTTCGTTATAGCCCCCTTACCTCTGATGATAACGATATTGATTCAGAGGGAAATCAATCTGATCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAACCGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAA

Protein sequence

MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY*

Homology

[Close]

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 7   VRYSPLTS-DDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L S DD  ID +  +S P          KIP+K+IALA+ L ++G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 7   VRYSPLTS-DDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L+S DD  ID +  +S P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q5E975 (Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 7   VRYSPLTS-DDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L+S DD  ID +  +S P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 7   VRYSPLTS-DDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L S DD  ID +  +S P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 7   VRYSPLTS-DDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L+S DD  ID +  ++ P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKTPP----------KIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_004141452.1 (transmembrane protein 230 [Cucumis sativus] >KGN52486.1 hypothetical protein Csa_008216 [Cucumis sativus])

HSP 1 Score: 234 bits (597), Expect = 1.28e-77
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 223 bits (567), Expect = 4.84e-73
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYS L SDDND+DSEG++ DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220 bits (560), Expect = 5.66e-72
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L +DDND+D EG+Q DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_022939930.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembrane protein 230-like [Cucurbita moschata] >XP_022993688.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993689.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993690.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023549544.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023549545.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6578563.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219 bits (557), Expect = 1.62e-71
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L++DDND+D +GNQ DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218 bits (556), Expect = 2.31e-71
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L +DDND+D EG+Q DPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A0A0KXG1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_5G637760 PE=3 SV=1)

HSP 1 Score: 234 bits (597), Expect = 6.21e-78
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 2.34e-73
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYS L SDDND+DSEG++ DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 7.86e-72
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L++DDND+D +GNQ DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1FP54 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 7.86e-72
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L++DDND+D +GNQ DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.12e-71
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYS L +DDND+D EG+Q DPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of CsGy5G028570 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 161.8 bits (408), Expect = 3.4e-40
Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MASRRNVRYSPLTSDDNDID-----SEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLG 60
           MASRR+VRY+ L  D++D        E    DPRF Y+PKAFD++PWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPD 117
            LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYETRIAYY+WRGA GYRFA+IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

[Close]

BLAST of CsGy5G028570 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

[Close]

BLAST of CsGy5G028570 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEIALAVALLVFGTLGIVSGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

The following BLAST results are available for this feature:

BLAST of CsGy5G028570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	1.4e-14	41.96	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q5BJP5	1.8e-14	42.86	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]
Q5E975	2.4e-14	42.86	Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1	[more]
Q8CIB6	2.4e-14	42.86	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q96A57	4.1e-14	41.96	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]

BLAST of CsGy5G028570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141452.1	1.28e-77	100.00	transmembrane protein 230 [Cucumis sativus] >KGN52486.1 hypothetical protein Csa...	[more]
XP_008459349.1	4.84e-73	93.97	PREDICTED: transmembrane protein 230 [Cucumis melo]	[more]
XP_023521905.1	5.66e-72	93.10	transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran...	[more]
XP_022939930.1	1.62e-71	92.24	transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembran...	[more]
XP_022961740.1	2.31e-71	92.24	transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran...	[more]

BLAST of CsGy5G028570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXG1	6.21e-78	100.00	Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_5G637760 PE=3 SV=1	[more]
A0A1S3C9X7	2.34e-73	93.97	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1	[more]
A0A6J1K312	7.86e-72	92.24	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1	[more]
A0A6J1FP54	7.86e-72	92.24	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=...	[more]
A0A6J1HAY7	1.12e-71	92.24	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=...	[more]

BLAST of CsGy5G028570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29170.1	3.4e-40	65.29	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	5.1e-12	43.24	Eukaryotic protein of unknown function (DUF872)	[more]
AT4G29850.1	8.7e-12	43.24	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 39..116 e-value: 5.9E-26 score: 90.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 6..26
None	No IPR available	PANTHER	PTHR15664:SF0	TRANSMEMBRANE PROTEIN 230	coord: 1..116
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G028570.2	CsGy5G028570.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane