CsGy5G028520 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G028520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	transmembrane emp24 domain-containing protein p24delta9
Location	Gy14Chr5: 32136558 .. 32138913 (+)
RNA-Seq Expression	CsGy5G028520
Synteny	CsGy5G028520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGGCCAATGCCATGACCGTCGGAAAATATTCGGCAGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGATCACTGTCAGGGTATATTCACTTTTAAGTTTATCCATTGCTTATCTTCTCCATTCTGAATTTATCATCTTTATGGTTTGCTTTTGGGTTTTTGTTTATGTTGATTTTGGAATTTGTTTAGATGATTAATTTAGGGTAATGGGAATTCTTATTAGGTTAGTTCGCCTCATGGCAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCGTTCACTGCAGCCGAGACTGGGGACTATACTACTTGCTTTTGGGTTCCCGAACAAAATCCTCCAGGTTTAGTTTCTGTTGAATTTGATTGGAGGTCCGGTGTTTCTTCTAAGGATTGGTCTAAGGTTGCTAAGAAAGGCCAGATTGAAGTAAGTCGTGAAATTTCTCGGTTGTTTTTGGCTTAGACTTGGATGCATTTGCTCATTGTTTGATGTTTGATGTTTTTGATGTTTTTCTTTTTCCTAACTATGCTTATATTTTCTGAATAATTATGTTGAACTTGTGATCATTGTGGTGGCTGCATGGTAAAATAAGTGTTCATGTTAGATCATAATTTGATTTGATACGGATTCAGATTGTAGAATAGATTTTGTCTCGTTTTTCTTCCTTGCAATATCATTAAAACAATTATGTTTTCAACAAGAATCTTCCTCTTTTTCTTGTAAAGAACTTATCATTATGGAATCAAGCAAAAGGAGACCCACATCAAGACCGTGTCAATGATATCATTTCTCTCTTGTACAATCAACTGAAAAACTTTTAACTTCTTTGGGATGTTCATCTTCTAGAGTTTGGCCCAAAAAAGGGGGCCCTCATAAAGCAAGAGGACCATTATTTTATTCTGAAGAGTGGCACTAAGGACCACTCGACTAGATGAAGGTGGACCATGATTTAAATTCCTTTGAAGGTAAAATTTAAGGGGACCCTGGAAGTAAAAAATGCCAAAAGAAGCCATAAAATTCTGGAGGAAAGCAAAGTCTTGATCCTTTTAAGCAAGGACTACCCTAATGATATAAGGCAGGATTATCATTTGAATTTCTATTCAAGTTGAAAATAGAGGAAGGAAGTCTTAATGTAAAATGTACAATATGCCACCATAACTACGAGGATCATGCTTGTGGGTCAAAGTAACTGGGTTAGAGAGAGAAAATAAAAGAACAAAAGCAAAAAGGAGTATAAGTTTTTCATATACAATGATGTTTTATGGGTTTTAGTGGTTCCTAATTTATGAATTTTATGCTGATATTTTTATCATATGGTCTCAATATATGAGGCGTGACTGAGATATAGTAAAGATTGTATACTTTTACCAATGTGCCCTTCTTCTCATTATATTCTCTACTAAATGTAGAAGATGGGTTCTTGTTTTTGTTTGATAGAAAGAATCTGTCAAATGATCATCTGATGAAATTGTTCATCATCTCTTGTGCTAGGTAATGGAACTTGAGTTGAAGAAGTTGTCCGACACAATCACCTCCATACATGATGAGATGTTTTATCTGCGTGAAAGGTACATTACAATGGATTGAGTCTCTAAAAAGCCTATAAAGCAAGGACACTTTAGTTTAGCTAACGTGTTTAAATACTTAGGCACTTCAACACTTGTTAGTCAAACAAATGTACCAGACATGTTGAATAAACTAAAAAAAACACGTATATGACAATAATAATAAATTTTGAGTATGAGATACCTCAAACTAACTTTTTCATGCATGTAATTCATCATAGCCATACAAAATTTGATATTAAAAAAAGATATACTAAAATGATATATTTTTTAGTTTCCTTGGCATTTGTATATTTGGTCGGCTATATAGTCTGTAGGTTCATTCAATGTGTGTTTAGATTGACTTTCAAAGTGTTTAAATAATTGTTATAAATGCAAAACAACACTTGGTAGAAAGTGAATCGAAACGGACACTCAGACTTGAGTTGATCGTATAATGAATATGATGATTGATTGATTATGTGTGTTTATCTTTTTTTGGTTTTCAGAGAGGAAGAAATGCAACTACTGAATAGATCAACGACTACAAAGATGGCCACTTTTAGTATCTTATCACTGGGAGTTTGCTTGTCTGTGGCTGCTTTACAATTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTCTGATTTTTCTCCCACTCTCTATTTCTGATATATTCTTCTCTAACAAATTACTTATTAGTCCTTTTCTTTTCCTTTTTAAAAACTTCAAAATTTAATAATAATAATTTGGGTATTAGATGGAAAAGTTTATGTTGGGCCGTGGG

mRNA sequence

CAAGGCCAATGCCATGACCGTCGGAAAATATTCGGCAGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGATCACTGTCAGGGTTAGTTCGCCTCATGGCAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCGTTCACTGCAGCCGAGACTGGGGACTATACTACTTGCTTTTGGGTTCCCGAACAAAATCCTCCAGGTTTAGTTTCTGTTGAATTTGATTGGAGGTCCGGTGTTTCTTCTAAGGATTGGTCTAAGGTTGCTAAGAAAGGCCAGATTGAAGTAATGGAACTTGAGTTGAAGAAGTTGTCCGACACAATCACCTCCATACATGATGAGATGTTTTATCTGCGTGAAAGAGAGGAAGAAATGCAACTACTGAATAGATCAACGACTACAAAGATGGCCACTTTTAGTATCTTATCACTGGGAGTTTGCTTGTCTGTGGCTGCTTTACAATTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTCTGATTTTTCTCCCACTCTCTATTTCTGATATATTCTTCTCTAACAAATTACTTATTAGTCCTTTTCTTTTCCTTTTTAAAAACTTCAAAATTTAATAATAATAATTTGGGTATTAGATGGAAAAGTTTATGTTGGGCCGTGGG

Coding sequence (CDS)

ATGACCGTCGGAAAATATTCGGCAGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGATCACTGTCAGGGTTAGTTCGCCTCATGGCAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCGTTCACTGCAGCCGAGACTGGGGACTATACTACTTGCTTTTGGGTTCCCGAACAAAATCCTCCAGGTTTAGTTTCTGTTGAATTTGATTGGAGGTCCGGTGTTTCTTCTAAGGATTGGTCTAAGGTTGCTAAGAAAGGCCAGATTGAAGTAATGGAACTTGAGTTGAAGAAGTTGTCCGACACAATCACCTCCATACATGATGAGATGTTTTATCTGCGTGAAAGAGAGGAAGAAATGCAACTACTGAATAGATCAACGACTACAAAGATGGCCACTTTTAGTATCTTATCACTGGGAGTTTGCTTGTCTGTGGCTGCTTTACAATTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTCTGA

Protein sequence

MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCFWVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLREREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL*

Homology

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BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-57
Identity = 105/169 (62.13%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKY+ VN NE  P P SHKI++RV+S +GNTYH+A+ VESG FAFTA E+GDY  C+
Sbjct: 46  MTVGKYTVVNPNEAHPSPQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACY 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   +S++FDWR+GV SK WS VAKK Q+EVME ++K+L +T+ SIH+EMFYLR
Sbjct: 106 TAVDHKPEVTLSIDFDWRTGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           EREEEMQ LNR+T +KMA  S LSL VCL VA +Q  HLKTFFE+KK++
Sbjct: 166 EREEEMQNLNRATNSKMAWLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

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BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.7e-57
Identity = 101/169 (59.76%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MT+GKYS +N +E  P+P SHK+TVRV+SP G  YH +D VESG F+F A ETGDY +CF
Sbjct: 44  MTIGKYSIINPHEDHPLPSSHKVTVRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCF 103

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   + ++FDWR+G+ +KDWS VAKK Q+E ME E+KKL +T+  IHDEMFYLR
Sbjct: 104 SAVDHKPETTLIIDFDWRTGIHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLR 163

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           +REEEM  LN +T +KMA  S +SL VCLSVA LQ WHLKTFF++KKL+
Sbjct: 164 DREEEMHNLNIATNSKMAWLSFVSLAVCLSVAGLQFWHLKTFFQKKKLI 212

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BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.5e-53
Identity = 97/169 (57.40%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKY+  N +EG  +P +HKI+V+V+S  GN YH+A+ V+SG FAF+A E GDY  CF
Sbjct: 46  MTVGKYNIDNPHEGQALPQTHKISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   +S++F+W++GV SK W+ VAKK Q+EVME E+K L DT+ SIH+EM+YLR
Sbjct: 106 TAVDHKPEVSLSIDFEWKTGVQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           +REEEMQ LNRST TKMA  S+LS  VC+ VA +Q  HLKTFFE+KK++
Sbjct: 166 DREEEMQDLNRSTNTKMAWLSVLSFFVCIGVAGMQFLHLKTFFEKKKVI 214

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BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-51
Identity = 98/170 (57.65%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 1   MTVGKYSAVNLNE-GFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTC 60
           M++GKY  VN NE   P+PDSHKI V+V  P G   H AD VE+G F+FTA E G Y  C
Sbjct: 44  MSIGKYFIVNPNEDNHPLPDSHKIIVKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVAC 103

Query: 61  FWVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYL 120
               +  P   ++++FDW++GV SK+W+ VAKK Q+++ME ++K L DT+ SIH+EM+YL
Sbjct: 104 ITAIDYKPETTLTIDFDWKTGVHSKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYL 163

Query: 121 REREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           REREEEMQ LNRST +KMA  S  SL VCLSVA LQ WHLKTFFE+KKL+
Sbjct: 164 REREEEMQELNRSTNSKMAWLSFGSLVVCLSVAGLQFWHLKTFFEKKKLI 213

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BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.9e-51
Identity = 99/169 (58.58%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG YS VN NEG  +P SHK+ V VSSP G ++H+A++VESG F FTA ETGDY TCF
Sbjct: 57  MTVGTYSIVNPNEGHHLPPSHKLFVTVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCF 116

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
             P   P    +V+F+W+SGV +KDW+ +AK+GQI ++E+E++KL D   +IH+EMF L 
Sbjct: 117 VAPGYRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEVEVRKLLDVTETIHEEMFQLI 176

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           ERE EMQ LNRST ++MA  S+LS  V +SVA LQL HLK+F ERKKLL
Sbjct: 177 EREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLKSFLERKKLL 225

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BLAST of CsGy5G028520 vs. NCBI nr
Match: XP_004141449.2 (transmembrane emp24 domain-containing protein p24delta9 [Cucumis sativus] >KGN52481.1 hypothetical protein Csa_008770 [Cucumis sativus])

HSP 1 Score: 341 bits (875), Expect = 1.32e-117
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF
Sbjct: 46  MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR
Sbjct: 106 WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

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BLAST of CsGy5G028520 vs. NCBI nr
Match: XP_008459344.1 (PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo])

HSP 1 Score: 318 bits (816), Expect = 1.30e-108
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG+YS VN+NEGFPIPDSH IT+RVSSPHGNTYH+ADHVESGHFAFTAAE+GDYTTCF
Sbjct: 46  MTVGRYSVVNVNEGFPIPDSHFITIRVSSPHGNTYHHADHVESGHFAFTAAESGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEFDWRSGVSSKDWSKVAKKGQIEVMELELKKL DT+TSIHDEMFYLR
Sbjct: 106 WAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLYDTVTSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRST TKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTNTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

[Close]

BLAST of CsGy5G028520 vs. NCBI nr
Match: KAA0039457.1 (transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo var. makuwa] >TYK00647.1 transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (816), Expect = 1.30e-108
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG+YS VN+NEGFPIPDSH IT+RVSSPHGNTYH+ADHVESGHFAFTAAE+GDYTTCF
Sbjct: 46  MTVGRYSVVNVNEGFPIPDSHFITIRVSSPHGNTYHHADHVESGHFAFTAAESGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEFDWRSGVSSKDWSKVAKKGQIEVMELELKKL DT+TSIHDEMFYLR
Sbjct: 106 WAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLYDTVTSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRST TKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTNTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

[Close]

BLAST of CsGy5G028520 vs. NCBI nr
Match: XP_038890728.1 (transmembrane emp24 domain-containing protein p24delta9-like [Benincasa hispida])

HSP 1 Score: 313 bits (801), Expect = 2.41e-106
Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYS VNLNEGFPIPDSHK+TVRVSSPHGNTYHNADHVESGHFAFTAAE+GDYTTCF
Sbjct: 45  MTVGKYSVVNLNEGFPIPDSHKLTVRVSSPHGNTYHNADHVESGHFAFTAAESGDYTTCF 104

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ P G V+VEFDWRSGVSSKDWSKVAKKGQ+EVMELELKKL DT+ SIHDEMFYLR
Sbjct: 105 WAPEQKPLGSVTVEFDWRSGVSSKDWSKVAKKGQVEVMELELKKLYDTVISIHDEMFYLR 164

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQ LNRST  KMATFS+LSLGVCLSVA+LQLWHLKTFFERKKLL
Sbjct: 165 EREEEMQKLNRSTNAKMATFSLLSLGVCLSVASLQLWHLKTFFERKKLL 213

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BLAST of CsGy5G028520 vs. NCBI nr
Match: XP_022990520.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita maxima])

HSP 1 Score: 295 bits (755), Expect = 2.29e-99
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYS VNLNEG PIPDSH +TVRVSSP GNTYHNADHV+SG FAFTA E+GDY TCF
Sbjct: 43  MTVGKYSVVNLNEGVPIPDSHMLTVRVSSPRGNTYHNADHVDSGQFAFTAVESGDYITCF 102

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEF+WRSGVSSKDWSKVAK+GQIEVME+ELKKL DT+ SIHDEMFYLR
Sbjct: 103 WAPEQKPPGAVTVEFEWRSGVSSKDWSKVAKRGQIEVMEVELKKLYDTVISIHDEMFYLR 162

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQ LNR+T  KMATFS LSLGVCLSVA LQLWHLKTFFERKKLL
Sbjct: 163 EREEEMQKLNRATNAKMATFSFLSLGVCLSVAGLQLWHLKTFFERKKLL 211

[Close]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL
Match: A0A0A0KXF5 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G637710 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 6.40e-118
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF
Sbjct: 46  MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR
Sbjct: 106 WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

[Close]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL
Match: A0A5D3BN42 (Transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002690 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 6.27e-109
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG+YS VN+NEGFPIPDSH IT+RVSSPHGNTYH+ADHVESGHFAFTAAE+GDYTTCF
Sbjct: 46  MTVGRYSVVNVNEGFPIPDSHFITIRVSSPHGNTYHHADHVESGHFAFTAAESGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEFDWRSGVSSKDWSKVAKKGQIEVMELELKKL DT+TSIHDEMFYLR
Sbjct: 106 WAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLYDTVTSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRST TKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTNTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

[Close]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL
Match: A0A1S3CAG6 (transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo OX=3656 GN=LOC103498505 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 6.27e-109
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG+YS VN+NEGFPIPDSH IT+RVSSPHGNTYH+ADHVESGHFAFTAAE+GDYTTCF
Sbjct: 46  MTVGRYSVVNVNEGFPIPDSHFITIRVSSPHGNTYHHADHVESGHFAFTAAESGDYTTCF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEFDWRSGVSSKDWSKVAKKGQIEVMELELKKL DT+TSIHDEMFYLR
Sbjct: 106 WAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLYDTVTSIHDEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQLLNRST TKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL
Sbjct: 166 EREEEMQLLNRSTNTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 214

[Close]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL
Match: A0A6J1JQB4 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima OX=3661 GN=LOC111487373 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 1.11e-99
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYS VNLNEG PIPDSH +TVRVSSP GNTYHNADHV+SG FAFTA E+GDY TCF
Sbjct: 43  MTVGKYSVVNLNEGVPIPDSHMLTVRVSSPRGNTYHNADHVDSGQFAFTAVESGDYITCF 102

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEF+WRSGVSSKDWSKVAK+GQIEVME+ELKKL DT+ SIHDEMFYLR
Sbjct: 103 WAPEQKPPGAVTVEFEWRSGVSSKDWSKVAKRGQIEVMEVELKKLYDTVISIHDEMFYLR 162

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQ LNR+T  KMATFS LSLGVCLSVA LQLWHLKTFFERKKLL
Sbjct: 163 EREEEMQKLNRATNAKMATFSFLSLGVCLSVAGLQLWHLKTFFERKKLL 211

[Close]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL
Match: A0A6J1HDX5 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moschata OX=3662 GN=LOC111463104 PE=3 SV=1)

HSP 1 Score: 295 bits (754), Expect = 1.58e-99
Identity = 143/169 (84.62%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKYS VNLNEG PIPDSH +TVRVSSP GNTYHNADHV+SG FAFTA E+GDY TCF
Sbjct: 43  MTVGKYSVVNLNEGVPIPDSHMLTVRVSSPRGNTYHNADHVDSGQFAFTAVESGDYITCF 102

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
           W PEQ PPG V+VEF+WRSGVSSKDWSKVAK+GQIEVME+ELKKL DT+ SIHDEMFYLR
Sbjct: 103 WAPEQKPPGAVTVEFEWRSGVSSKDWSKVAKRGQIEVMEVELKKLYDTVISIHDEMFYLR 162

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 169
           EREEEMQ LNR T  KMATFS LSLGVCLSVA LQLWHLKTFFERKKLL
Sbjct: 163 EREEEMQKLNRDTNAKMATFSFLSLGVCLSVAGLQLWHLKTFFERKKLL 211

[Close]

BLAST of CsGy5G028520 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-58
Identity = 105/169 (62.13%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKY+ VN NE  P P SHKI++RV+S +GNTYH+A+ VESG FAFTA E+GDY  C+
Sbjct: 46  MTVGKYTVVNPNEAHPSPQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACY 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   +S++FDWR+GV SK WS VAKK Q+EVME ++K+L +T+ SIH+EMFYLR
Sbjct: 106 TAVDHKPEVTLSIDFDWRTGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           EREEEMQ LNR+T +KMA  S LSL VCL VA +Q  HLKTFFE+KK++
Sbjct: 166 EREEEMQNLNRATNSKMAWLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of CsGy5G028520 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.0e-58
Identity = 101/169 (59.76%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MT+GKYS +N +E  P+P SHK+TVRV+SP G  YH +D VESG F+F A ETGDY +CF
Sbjct: 44  MTIGKYSIINPHEDHPLPSSHKVTVRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCF 103

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   + ++FDWR+G+ +KDWS VAKK Q+E ME E+KKL +T+  IHDEMFYLR
Sbjct: 104 SAVDHKPETTLIIDFDWRTGIHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLR 163

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           +REEEM  LN +T +KMA  S +SL VCLSVA LQ WHLKTFF++KKL+
Sbjct: 164 DREEEMHNLNIATNSKMAWLSFVSLAVCLSVAGLQFWHLKTFFQKKKLI 212

[Close]

BLAST of CsGy5G028520 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-54
Identity = 97/169 (57.40%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVGKY+  N +EG  +P +HKI+V+V+S  GN YH+A+ V+SG FAF+A E GDY  CF
Sbjct: 46  MTVGKYNIDNPHEGQALPQTHKISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACF 105

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
              +  P   +S++F+W++GV SK W+ VAKK Q+EVME E+K L DT+ SIH+EM+YLR
Sbjct: 106 TAVDHKPEVSLSIDFEWKTGVQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLR 165

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           +REEEMQ LNRST TKMA  S+LS  VC+ VA +Q  HLKTFFE+KK++
Sbjct: 166 DREEEMQDLNRSTNTKMAWLSVLSFFVCIGVAGMQFLHLKTFFEKKKVI 214

[Close]

BLAST of CsGy5G028520 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 204.1 bits (518), Expect = 8.7e-53
Identity = 98/170 (57.65%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 1   MTVGKYSAVNLNE-GFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTC 60
           M++GKY  VN NE   P+PDSHKI V+V  P G   H AD VE+G F+FTA E G Y  C
Sbjct: 44  MSIGKYFIVNPNEDNHPLPDSHKIIVKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVAC 103

Query: 61  FWVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYL 120
               +  P   ++++FDW++GV SK+W+ VAKK Q+++ME ++K L DT+ SIH+EM+YL
Sbjct: 104 ITAIDYKPETTLTIDFDWKTGVHSKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYL 163

Query: 121 REREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           REREEEMQ LNRST +KMA  S  SL VCLSVA LQ WHLKTFFE+KKL+
Sbjct: 164 REREEEMQELNRSTNSKMAWLSFGSLVVCLSVAGLQFWHLKTFFEKKKLI 213

[Close]

BLAST of CsGy5G028520 vs. TAIR 10
Match: AT3G29070.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-52
Identity = 99/169 (58.58%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MTVGKYSAVNLNEGFPIPDSHKITVRVSSPHGNTYHNADHVESGHFAFTAAETGDYTTCF 60
           MTVG YS VN NEG  +P SHK+ V VSSP G ++H+A++VESG F FTA ETGDY TCF
Sbjct: 57  MTVGTYSIVNPNEGHHLPPSHKLFVTVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCF 116

Query: 61  WVPEQNPPGLVSVEFDWRSGVSSKDWSKVAKKGQIEVMELELKKLSDTITSIHDEMFYLR 120
             P   P    +V+F+W+SGV +KDW+ +AK+GQI ++E+E++KL D   +IH+EMF L 
Sbjct: 117 VAPGYRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEVEVRKLLDVTETIHEEMFQLI 176

Query: 121 EREEEMQLLNRSTTTKMATFSILSLGVCLSVAALQLWHLKTFFERKKLL 170
           ERE EMQ LNRST ++MA  S+LS  V +SVA LQL HLK+F ERKKLL
Sbjct: 177 EREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLKSFLERKKLL 225

The following BLAST results are available for this feature:

BLAST of CsGy5G028520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQY3	2.5e-57	62.13	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]
Q8GYG1	5.7e-57	59.76	Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana ...	[more]
Q8VY92	8.5e-53	57.40	Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana...	[more]
O81045	1.2e-51	57.65	Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana ...	[more]
Q9LJV9	7.9e-51	58.58	Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana...	[more]

BLAST of CsGy5G028520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141449.2	1.32e-117	100.00	transmembrane emp24 domain-containing protein p24delta9 [Cucumis sativus] >KGN52...	[more]
XP_008459344.1	1.30e-108	91.72	PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo...	[more]
KAA0039457.1	1.30e-108	91.72	transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo var. makuw...	[more]
XP_038890728.1	2.41e-106	89.94	transmembrane emp24 domain-containing protein p24delta9-like [Benincasa hispida]	[more]
XP_022990520.1	2.29e-99	84.62	transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita maxima]	[more]

BLAST of CsGy5G028520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXF5	6.40e-118	100.00	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G637710 PE=3 S...	[more]
A0A5D3BN42	6.27e-109	91.72	Transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo var. mak...	[more]
A0A1S3CAG6	6.27e-109	91.72	transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo OX=3656 ...	[more]
A0A6J1JQB4	1.11e-99	84.62	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima...	[more]
A0A6J1HDX5	1.58e-99	84.62	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moscha...	[more]

BLAST of CsGy5G028520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26690.1	1.8e-58	62.13	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G14010.1	4.0e-58	59.76	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G69460.1	6.0e-54	57.40	emp24/gp25L/p24 family/GOLD family protein	[more]
AT2G03290.1	8.7e-53	57.65	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G29070.1	5.6e-52	58.58	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..115
None	No IPR available	PANTHER	PTHR22811:SF72	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24DELTA7	coord: 1..169
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 6..164 e-value: 6.1E-36 score: 135.4
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 4..164 e-value: 4.6E-43 score: 147.3
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 1..104 score: 10.337213
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G028520.2	CsGy5G028520.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane