CsGy5G027645 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G027645
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RNA ligase/cyclic nucleotide phosphodiesterase
Location	Gy14Chr5: 31438437 .. 31442768 (+)
RNA-Seq Expression	CsGy5G027645
Synteny	CsGy5G027645

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAGTTGTTAGGAGTATTAAGATATAGTAAAGCGTTGAGTAAATGTTGGTAAAGCATAATTCAAAATTTGGTGTACCAAAGGGATTTGGAGTTCAACGCTGGTTGGCTCGGTGGTTTAAGCGGGCCGGCCGATGCCCCCTTCTCTCTCTCTCTCTCCCGTTGTCTTCCTCGTTTCGATCCACTCCGAAACACACCCAATCTGGTTCGGCTCTTACCAAGTGGCTTTGCAGTTCCAACTCTCTCGTATAGCCTTTCCTTTCATCCCTCTCTTTCCCACTTTTAACTTCACTTCACCGCTTTAGGTCTCTATTCGTCCATTTCTTAATCACCCCATCTTCTTAAAACTCTCCACTTTCTTCAAATTTCTGTTTTTTGTTTCTCTTTTACCTCTTTCTCGCATTTTTATAGCTTCTTAATCATCTGGGTCCTTTGGATTTCTTCTGGGTATTATTGTTTTCTTCTGTTTTCTTTGTCTTCTATTTCTAGGGTTTTGAATTTCCCCTTTCGTACACCTCTGATCTTCTCTTGTAATTGGAAATTGGAAATTGGAAATTTTGGTTTCTGGGTTTTGTTTGTTTCTCTAATTTACTTTCAGGATTTTGAGTTCTAAGGCGATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGAAGCTTTGACGCCATTGTTGTGCTTTAATCTCATAGTTCTTCTCTATGAACTTGTATAACCTTCAATTTATTGTAGCTGTTTTAGAGGTCCTATTTAGACGCTAGAGCATTACAAATAAGGATACATTTTGTATTTTGTGTTATGAATTTGATATTTTCTATATTGTCTTCATATTACATTTGAATCTTACGTGCTAGTGCATTTAATAAACACAGTTGATTTGATTATTAGTGAAGAGGAAAAACCTTATAGGTTCATTCACTTGCTAAGGCTCTGAACTTGTTGGGTTCTTTGAGATGATTCCTGTATTCACAATTCATACTGTAGATTGTAACCTTTCATTGGATTCTGTTGAAATTGATGTTAAAGGCTTAGGCCTTTCAATTATAATTGCTCTTGGATAAACACTTTTACTTGCAAGTTGCTGTATCATGAACCTTTTTATGGGTTGAGTTGTAAACTGATAAGCAAAGTCCTATTAATTTAGACTTTCTGCTGTTGATGTGACTCAAAAAGTAGCTGAATTTGGTAAATTTCAATCTCATCCGTGGCTTGTTATGAACATTTGATTCACGGATGTCTTCATGGCCTACCTTCTTGAGTTCCTCTGTTATTAGTTGATATTGATCTCCTCTCTGTACATTTCCACATTTTCAATTTCATAAAAGCATTTGCTTTAGCTGTCCTCGAGTTCAATATGTTCTTCAGGGTGGCTGGACTTGGTTCGTGTTAGTGTTTAACTTCTTTGATCTGATTCCTATAGTAATTTGTTTCCTTACTTCTCTATGATCATTCATATGGAGACACTTAAGAGGGATGAGTGCATGTCAAATCCCTTACTTGTTGTGGATTGTGTATGAATTCATTGATCACTTACCCCTTAAATGTTGAGGTGCCTTAGGCGAAACTCATAACTAACCCCAAATTTTTTTATCTTGAGTTGAGAGACTTGTGTCAAAGAACACGTGGAGGCTACGCAGCTGTATGCCTCGTGACATAGCTACAAAAGTGATATCAATTTCCCGTGCTCTTCAAAAATATAGAAGCTCATGACTCTACCCTTGTAACCTTACCCAATTTCTATGATTATGAGTGAGTTAAGGAAAATATAGTGACTAAAGTTGAAGAATAAGTTCATACTACTAGTGATAATAATTTTACGATGTTGAAAATAATGGGATTATTGGTAGACATAATCTTTTTCCTTTTTTTTTTTTTTGTACTTTATATGATTATTTTGTTGATGATACTCTATTTACAACATAATCATCTGTTAATGTTTTTCTTTTAACTTAATCAAGTATTATGCTTCATATCATCTTGATGTGACTTTAATATTCAATGCTATGTTTTTCTCTTTTTTCTTAGTTTCGCATGAAGGGGTTGAGATATGGACCCCTTACATTTTGATAAGGAAGGATATAATCCTTAACAAGTCGACATCGCTTGAGTTGGATATGTAAAATAGGGCATGCTGTTATAATCAATCACATGCAAGCTCAAGTTTCTTGGCCTTTTGGTTTCTTTTCTTGCTCTCAAGAAAATCTTGTCCATCCAGCTTCCTTTTCCCTTTAAAAACCTTCTCATTCTTCATCCCTTCTAATACTAAGTTCTAGTTCCATACAACTTGGCATTTGTGTGTCATTACACTACAATAGTGTTCGCAAAGTTTAGTGAAATAGTTTTTACTTCAACAGATGTCTTATTGAACTTGTAATGAGAGGGAGATTTTTGTTATGTTAGATAATGGTAGATTCGAGGTTGTCCAAATTAGAACAACAAGTTGATCCATATAGCACGAGGATGCAACTAGCTCAGTCTGTGAGCCTAATGATTGGCCCAAGCTCAACCCAAGAGAGAATAGCGAGATACTAAAGTACCTCAGGGATGAAATTTGATTTGAGGGATTATGAAGAGAGTAAACATCCATACATACTATGCACTGCATATTTTAAGATTCAATCTCAACCCAACACAGTAAAACATATGGAAATAACTTCAATATCATCAGCTGATTCAAACACTGTCAATACAACAACTCTCATGATGAAACAGGAACTTCAAAGACAGACAAAGTAGAAACAACAAGAAATTCAACATTGCAGTACAGAATGACAGGCAGATCATTATCCATCAGAGAACTCAAACAATCTCTTTGAGGACAAGAAAAGAAACAAGAAGACCAAGAAACTTGAAGAGCATTGAGTGGGAATGTAAGGCCTCAGGTGCATCAGAGCTGCCATAGCTCTGAGCTTCTGCTTCTGTAGCCATGGAAACAAGCAAGCAAGCAACCCAAATGAGAACCATACCCAAACATTTCCGAAGATCCATGTTCCTTTCTTTCTTTCTTCTTCTTCTTTATGTTCAGACTGAGGAAAGGATGTTCTAATGGTGGGAAATTTATAGAGAGAAAAAAAGGATAATTTGGGAGAGAACTTTTTCATTGGAAGTGTCAAAATATGAAGCAAAAATTGTTTGTTACTTTTTCAGATGGATATGAATTTTGGTGTAGAGAACGGCATATAGGAGACAATTGGAGGCTGATTCAGCTTTCTTCATGGCTTCATGCTTTGCAGGCCAGGTGATAATAACAATGAGTTTTCAGGCCATAGGTTCCTCTAGTTATATGCTTACAAATAAATGTGTGAATATACTTTAAAATGTTCTTATAGCTCTAACACGTCTCAACTAGCTACGTAATTATGTTATTAACAAAAATGATGGAGATTTAAATATTTGTCCCAAATTTTTGAACGATTTTATATATTTTTTTAGATTGACTATACTTGATTCTAGATATTTCAAAGTGGAAACTTTGCTTGTAATTTGAAAAACAACCCGGAAGGGTTCTTAACTTTAATTCATCGTTAATTGCCTTAATGGATGTCGTAACAACTTTACTAATTAAATAATTGACATGGTTACCTTCTCTCTCTTTATTCTTTCTTCTAATCTCTCCCTTTCTTTAGCCGGCACATCGTTGTTGTTTGAAGAACCATATTAGAACAATAGGAACCCTTTGTTCCAAATCAGACTCATTTGAATTCGAGGAATGAATGATATGATCTGCAGCAACATACAGACAATAGTGAAGAGGGAGATTTTCAAGTATTATTATACTTCATACTACTTTCATTCAACATTTGATACAATAATAGACAATAA

mRNA sequence

ACTAGTTGTTAGGAGTATTAAGATATAGTAAAGCGTTGAGTAAATGTTGGTAAAGCATAATTCAAAATTTGGTGTACCAAAGGGATTTGGAGTTCAACGCTGGTTGGCTCGGTGGTTTAAGCGGGCCGGCCGATGCCCCCTTCTCTCTCTCTCTCTCCCGTTGTCTTCCTCGTTTCGATCCACTCCGAAACACACCCAATCTGGTTCGGCTCTTACCAAGTGGCTTTGCAGTTCCAACTCTCTCGTATAGCCTTTCCTTTCATCCCTCTCTTTCCCACTTTTAACTTCACTTCACCGCTTTAGGTCTCTATTCGTCCATTTCTTAATCACCCCATCTTCTTAAAACTCTCCACTTTCTTCAAATTTCTGTTTTTTGTTTCTCTTTTACCTCTTTCTCGCATTTTTATAGCTTCTTAATCATCTGGGTCCTTTGGATTTCTTCTGGGTATTATTGTTTTCTTCTGTTTTCTTTGTCTTCTATTTCTAGGGTTTTGAATTTCCCCTTTCGTACACCTCTGATCTTCTCTTGTAATTGGAAATTGGAAATTGGAAATTTTGGTTTCTGGGTTTTGTTTGTTTCTCTAATTTACTTTCAGGATTTTGAGTTCTAAGGCGATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGAACTTCAAAGACAGACAAAGTAGAAACAACAAGAAATTCAACATTGCAGTACAGAATGACAGGCAGATCATTATCCATCAGAGAACTCAAACAATCTCTTTGAGGACAAGAAAAGAAACAAGAAGACCAAGAAACTTGAAGAGCATTGAGTGGGAATGTAAGGCCTCAGGTGCATCAGAGCTGCCATAGCTCTGAGCTTCTGCTTCTGTAGCCATGGAAACAAGCAAGCAAGCAACCCAAATGAGAACCATACCCAAACATTTCCGAAGATCCATGTTCCTTTCTTTCTTTCTTCTTCTTCTTTATGTTCAGACTGAGGAAAGGATGTTCTAATGGTGGGAAATTTATAGAGAGAAAAAAAGGATAATTTGGGAGAGAACTTTTTCATTGGAAGTGTCAAAATATGAAGCAAAAATTGTTTGTTACTTTTTCAGATGGATATGAATTTTGGTGTAGAGAACGGCATATAGGAGACAATTGGAGGCTGATTCAGCTTTCTTCATGGCTTCATGCTTTGCAGGCCAGCCGGCACATCGTTGTTGTTTGAAGAACCATATTAGAACAATAGGAACCCTTTGTTCCAAATCAGACTCATTTGAATTCGAGGAATGAATGATATGATCTGCAGCAACATACAGACAATAGTGAAGAGGGAGATTTTCAAGTATTATTATACTTCATACTACTTTCATTCAACATTTGATACAATAATAGACAATAA

Coding sequence (CDS)

ATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGAACTTCAAAGACAGACAAAGTAGAAACAACAAGAAATTCAACATTGCAGTACAGAATGACAGGCAGATCATTATCCATCAGAGAACTCAAACAATCTCTTTGAGGACAAGAAAAGAAACAAGAAGACCAAGAAACTTGAAGAGCATTGAGTGGGAATGTAAGGCCTCAGGTGCATCAGAGCTGCCATAG

Protein sequence

MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGNFKDRQSRNNKKFNIAVQNDRQIIIHQRTQTISLRTRKETRRPRNLKSIEWECKASGASELP*

Homology

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BLAST of CsGy5G027645 vs. NCBI nr
Match: XP_004142350.1 (uncharacterized protein LOC101208638 [Cucumis sativus] >XP_008458738.1 PREDICTED: uncharacterized protein LOC103498055 [Cucumis melo] >KAA0037479.1 RNA ligase/cyclic nucleotide phosphodiesterase [Cucumis melo var. makuwa] >KGN52392.1 hypothetical protein Csa_007965 [Cucumis sativus] >TYK01955.1 RNA ligase/cyclic nucleotide phosphodiesterase [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 1.41e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

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BLAST of CsGy5G027645 vs. NCBI nr
Match: XP_038890563.1 (uncharacterized protein LOC120080080 [Benincasa hispida])

HSP 1 Score: 304 bits (779), Expect = 1.35e-102
Identity = 153/156 (98.08%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSD+NILFLGPAPSISLLQFQSQLC+AMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDSNILFLGPAPSISLLQFQSQLCDAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. NCBI nr
Match: XP_022993671.1 (uncharacterized protein LOC111489594 [Cucurbita maxima] >XP_023551692.1 uncharacterized protein LOC111809459 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301 bits (772), Expect = 1.57e-101
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSG
Sbjct: 121 RPGSWIPHCAVAQEVPRARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. NCBI nr
Match: XP_022964210.1 (uncharacterized protein LOC111464296 [Cucurbita moschata] >KAG6602451.1 hypothetical protein SDJN03_07684, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033135.1 hypothetical protein SDJN02_07188, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301 bits (772), Expect = 1.57e-101
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSL+SIGSLP+DNNILFLGPAPSISLLQFQSQLCEAMRKEGIE GEEY
Sbjct: 61  VKNFASKQEPLPLSLASIGSLPNDNNILFLGPAPSISLLQFQSQLCEAMRKEGIETGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. NCBI nr
Match: XP_022939795.1 (uncharacterized protein LOC111445566 [Cucurbita moschata] >KAG6578632.1 hypothetical protein SDJN03_23080, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300 bits (769), Expect = 4.49e-101
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           R GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSG
Sbjct: 121 RPGSWIPHCSVAQEVPRARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL
Match: A0A5A7T7Y4 (RNA ligase/cyclic nucleotide phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00470 PE=4 SV=1)

HSP 1 Score: 309 bits (792), Expect = 6.84e-105
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL
Match: A0A0A0KVB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630940 PE=4 SV=1)

HSP 1 Score: 309 bits (792), Expect = 6.84e-105
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL
Match: A0A1S3C834 (uncharacterized protein LOC103498055 OS=Cucumis melo OX=3656 GN=LOC103498055 PE=4 SV=1)

HSP 1 Score: 309 bits (792), Expect = 6.84e-105
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL
Match: A0A6J1JWZ6 (uncharacterized protein LOC111489594 OS=Cucurbita maxima OX=3661 GN=LOC111489594 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 7.60e-102
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSG
Sbjct: 121 RPGSWIPHCAVAQEVPRARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL
Match: A0A6J1HK74 (uncharacterized protein LOC111464296 OS=Cucurbita moschata OX=3662 GN=LOC111464296 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 7.60e-102
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSL+SIGSLP+DNNILFLGPAPSISLLQFQSQLCEAMRKEGIE GEEY
Sbjct: 61  VKNFASKQEPLPLSLASIGSLPNDNNILFLGPAPSISLLQFQSQLCEAMRKEGIETGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 156

[Close]

BLAST of CsGy5G027645 vs. TAIR 10
Match: AT5G40190.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-63
Identity = 111/156 (71.15%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60
           MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFST F + T++ES+
Sbjct: 1   MSEGYAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESV 60

Query: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           +KNF SKQEP+++S S+IGS  SDNN+LFL P PS+SLLQ Q+QLC+ ++KE ++IGEEY
Sbjct: 61  IKNFVSKQEPISISFSTIGSFSSDNNVLFLSPTPSLSLLQLQTQLCDMLKKESVDIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG 157
           R+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+G
Sbjct: 121 RVDSWVPFCPVALDVPKSRMAEAFSVLRDLKLPVNG 156

[Close]

BLAST of CsGy5G027645 vs. TAIR 10
Match: AT3G28140.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-58
Identity = 111/161 (68.94%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVES 60
           MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS T  ++ TK+E 
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEP 60

Query: 61  IVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEE 120
           I+K+F+SKQEP++LS SSIGS  SD+N LFL P PS+SL+Q Q QLCE ++KEG EIGEE
Sbjct: 61  IIKSFSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEE 120

Query: 121 YRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGNFKD 161
           YR+ SW+P C+VA +VPK+R++E F VLRDLKL V G   D
Sbjct: 121 YRVDSWVPFCSVAVDVPKSRISEGFLVLRDLKLLVYGYAMD 161

[Close]

BLAST of CsGy5G027645 vs. TAIR 10
Match: AT3G28140.2 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-54
Identity = 103/153 (67.32%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVES 60
           MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS T  ++ TK+E 
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEP 60

Query: 61  IVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEE 120
           I+K+F+SKQEP++LS SSIGS  SD+N LFL P PS+SL+Q Q QLCE ++KEG EIGEE
Sbjct: 61  IIKSFSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEE 120

Query: 121 YRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL 153
           YR+ SW+P C+VA +VPK+R++E F V     L
Sbjct: 121 YRVDSWVPFCSVAVDVPKSRISEGFLVTSTFSL 153

The following BLAST results are available for this feature:

BLAST of CsGy5G027645 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G027645 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142350.1	1.41e-104	100.00	uncharacterized protein LOC101208638 [Cucumis sativus] >XP_008458738.1 PREDICTED...	[more]
XP_038890563.1	1.35e-102	98.08	uncharacterized protein LOC120080080 [Benincasa hispida]	[more]
XP_022993671.1	1.57e-101	96.79	uncharacterized protein LOC111489594 [Cucurbita maxima] >XP_023551692.1 uncharac...	[more]
XP_022964210.1	1.57e-101	96.79	uncharacterized protein LOC111464296 [Cucurbita moschata] >KAG6602451.1 hypothet...	[more]
XP_022939795.1	4.49e-101	96.15	uncharacterized protein LOC111445566 [Cucurbita moschata] >KAG6578632.1 hypothet...	[more]

BLAST of CsGy5G027645 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7Y4	6.84e-105	100.00	RNA ligase/cyclic nucleotide phosphodiesterase OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KVB2	6.84e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630940 PE=4 SV=1	[more]
A0A1S3C834	6.84e-105	100.00	uncharacterized protein LOC103498055 OS=Cucumis melo OX=3656 GN=LOC103498055 PE=...	[more]
A0A6J1JWZ6	7.60e-102	96.79	uncharacterized protein LOC111489594 OS=Cucurbita maxima OX=3661 GN=LOC111489594...	[more]
A0A6J1HK74	7.60e-102	96.79	uncharacterized protein LOC111464296 OS=Cucurbita moschata OX=3662 GN=LOC1114642...	[more]

BLAST of CsGy5G027645 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40190.1	1.8e-63	71.15	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT3G28140.1	3.0e-58	68.94	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT3G28140.2	2.7e-54	67.32	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 5..176 e-value: 1.1E-15 score: 59.8
None	No IPR available	PFAM	PF13563	2_5_RNA_ligase2	coord: 41..157 e-value: 2.0E-11 score: 44.1
None	No IPR available	PANTHER	PTHR36039	FAMILY NOT NAMED	coord: 1..158
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 5..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G027645.1	CsGy5G027645.1	mRNA