CsGy5G027170 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G027170
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
LocationGy14Chr5: 30807047 .. 30811460 (-)
RNA-Seq ExpressionCsGy5G027170
SyntenyCsGy5G027170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTTTTAGTTGTAGACATATCTTTTACTCTCATAAGAAATAGAACTGGGAGAAGAAAAGTAGGGATTTGAAGATTGCAAGAGGTAGCGCAGCGATAGCCGAGTGGAGTTGGCGAAGGCAGAGCGAAGTTACACTCTGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCCGCGAGTCTTGAAGAAGCCCGGAGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTCTTCTCGTTCCTTCAATTTACTCTATTTGCTTCTTGTTTCTATATGATTTTCGATTCTCCTTAATGGGTTTATGAGATTTTCCCTCTGTGTCGATTAGAGACGTAAGGAATTTTGAAGCTTTCTTGCCGTTCATTTGAAACGAAGCTTTATAGAAATATAAAACAAAGAAAAGAGTTTTAGAGGGCTTTGGTGCCCTAGGGGTTTTGCCATTGCAACGCAGCGGGGCGACTTTTTGAACTTGGATGATTTCTCCCTCCTTAATAGTGGGCATATTAGATAGGGTGGATAAAGTTGATGACTTGTGTTCTTTCGTCTCAACTTTTTCGTGGACAATCTATTCTATATGTTTTGTTTTTCTTGGACTCGTCCTTCTAATTATGGGAGTTGGGTATTAGTTCTTTCAGTGCTATGGTGAATTTGATGGTATGATTCTTCGGACAACCCATCAATTGCTGACTTTTTGGGAGATTTATTTCAATGGAGTTTCTTGAAGATAGGCGTGCAAGAACAAGTTTGAAAGAACCTAGGCTTAGAACTCATTTATTTACTTCTTTTGCTACTGCAATTTTACAAAAAGTTCTATTTTTCTCCTAGAAAATTTCTTGTTTTCGAGGTCTTCAGTTAGAAAGAAACCAGAGTGTAAAATCGTTATTTTGGGTCAGTTTACTCCAATTGAGGTGCCTTTTTTCAAACTCCTTGAAAGTTTTTTCTTCTGTATATTTCATTTATAGATGCACTTGGTTTCCTGTCAAATTCAATAGTGTATTAATAATTTGAACGTTTCACGAGACTACCATAATCTTAATTTGTTATGGGCCTGGTATGTGAGGGTATTTGATGAATTTGTCGATGTGTACTGTCCCTAAAAAAAATATTGTTAACGGCCTAAGAGCAAGGGGATCTTGGTAGTAAATAAGATAATTAGCTGTAAAAATCATCAATGATTTTATTTTATTCTCTTTTTTATTGTTTCCTTTTATGTATTGACTCTCCTATATTAGAAGGCTACTTATCTTGCAAATAATTTAATTTATTCTATTCAATTCTTAATGGAATCAGAGAATGTGGTCAAAGGCAAAAATACAAAATCCTGGTTTTTTTTGTCTTCATTGAAACATGTTTAGGCTTGCTTGCACCAAACTTCTTCATCTTTATCATCATTCGACTAAGAAATTGTTTTGTTGTTGATGTTTGTTGCTTGGGAGCTCATTCTCATTCTCATTTGATTTCCATCATCCTTTGTCCAATAGGGAAGCTACTTAGGTTATGACCCCCCTTTATTTATTACTGGATGGTGAGGTTAGGCAAGGGAAGAGGGACTTCCAAAGAGAAAAGGAACGCTGATGGAAATCACATTGCAAAAAGTAAATAATGGATTAAATAGAATCCTTGTTACGATTGGTGAAGATAGAAGAGGTTGGAAAGCATATCTTTCTCTTTTGTCTTCACTTCATGAAAGCCAGGTCCAGAACGAGAGGAAAGAGAACCCCCAAGAGGGCCAAGACAAAAAGCCATCCACGTACATCATACATTGCTGCTCTTAAGAAGGAAAATTTCCATATCTTTCCACCCTCTACTGAACTAGCGAATTCATCAACCACATCAAAGGCTCCATCTCCCACATCCATCAACAAATCAGCCCATGCATATCCACATTCCTCCATCCACTTTAATAGTTTGGTTGTCATTAGGAGATACTGCTTCAACGACAATTGGTACAACATTATAAGAGCTTTCAACATTCATGAGAGTGCCTGTATCAGCAATCCTTTCAACACTGACAGGGTTGCTTATCTCTGAGGATATTGATCAAACCAAAACCCTTAGTACAGTAAAGGTTTGGTATAAGGTAGGAAGATATTTGGTAAAATTCTCCCCATGGACTTGGAGTGCTGAAAATGCAACGAAAGATCAAGTTGTCCTTAGCTATGGAGGTTGGATGAAAATTAGGAACCTCCCACTTGATCGATGGGATAATGACATGCTTATGTTCATTGGAGAATCTTGTGGTGGCTTCCTTGAAATTTCCGAAAAGCCATTGAGACGACTAGATCTCTTTGAAGCTTCAAGAAGGTCAACAGAAATAATAAAGGTTTCATTCCACCTATAACCATATTCCTTCTTCTTCACATCACCGATCAAAGTACATATTGACCTCCTTTTTAATTAGGAAAACTACCTCTGCCGGAATCTGTTGTGCACCCACTTTGCCTAGTGTTCAACAGCTACTGGAGTCCAACTCGGAATCACCAATTCCAATTGGCGTAGCCCCACTAGTCTCTGCACAATCTCTACCCACAAATACCAAAACACTAAACCCATAGTTACCTGATCCTTCATGCGGTCATGCCCTCTGTCCACTTTACCTAATCCAGTTATTTTACCTGTTGCTGATCCACCAACCTACTCAATTCTCTTGTCTTAAGATCATTGAATGTACTCCTAATTCTGTTCTGACGACCTTTGGATGCTTGATAATCCACTGATGCTTCTTATCAAAAAAAAGATAATCCACTGATGCTGAGTGCTCTGTTTTTTCGAGTCTAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATCAATCTTCTCTTCTTGTAGTCTGTTTGCATCTTCAGATAGACTCATTTTCAGCTTGCTCTGTTCTGAATACCACTTTATGTAATCATGCTTTGATTTGAAGCTCTTCAACATATTGAGAAACATTTTCCATCCCTCTTTTTCCTCACCCAATAGAATATGTAAGAATGATATTCCTTCTGTTTGGGGCCAAAAATTGCATCTTAACACCCAACCTTTCTCTAATCTGAAGCTTAAGACTTCTGTTATGCCACTGTCCATTCTTCCTTCCAGCAGAGGTGAGACCTTGATAGTGACAGGATTTTATTTGCCTCCATATCTTCAAGTTGGAATAAATCATGCTCGTGCCATATGCAGTAGGGAGAGCCAAAAACCCTGCAGCTTTCTTACTTCCATTCCTTGCTTTCTAGCCTGTAGAGCATTCTTGTTCGTCATTTGTCTTGTTTTTTCTCTTTCTTGGTTTGTTTGTTTTGGTTCAAATTCTATCTAGGGTGCTCCCTATCCGAACTTTCTAATGGTGTTGTGTTAGAATGGTCAAGGTGGATGTACGTGTGGGATACTGTGTGACCCAAACATGAGGAATTTGATAACTTTTTTTTAGTTCTTACTTAATCTCCAGGTGGAGGCTATGTTCAGAGTTTTCTCCTAATTTTCCTTTTTTAATACAATTGTTTCTCTTTCCAAAAAATGAGATGGATGGTAGCTTGTGGTAGGCCATTATTTTTGCTTGATTATTTTAATTTCCTAAGATGCTGCTCTTCTCACTGTATTGGTGTTGGACTGCGAACGTTAAGATTATTTTTATTAGTTTCCATCTCTTTTTTTTTACAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGAGATATCCATAGTTTTAATTTGTGATCTTGATAAATAATAAAGGAACTATATCTGTCCTCTAGACCATGACATCATTTGATCGTTTTGTGGGATTGAATTGTCGGTATATTATAGCCAAAGCAATCCAAGATCTTTGGTTCGATTTACTCTTAACCATTAAGCCTAAATGTGGTTGTCTACCCTATGCTTTGGTTCGAGATGGTGCTTCCCTTGGTTTCGATTGTTTTCATTCATGACTGCCATGTTTATAAGTTCAATACAGTATCAAACTTGGAAAGGGACAGTGTGGTCTCTATTGGTTTATATAGAGAGAGAGAAATGTAAAACGAAAACTATTGTCTTGATTGTGGTGTGTGAAGAATGCACAAAAACCATTTATTTGATTGGATTAAGTTAATTTTGAGTTTTCGAGAACAG

mRNA sequence

ATTTGTTTTAGTTGTAGACATATCTTTTACTCTCATAAGAAATAGAACTGGGAGAAGAAAAGTAGGGATTTGAAGATTGCAAGAGGTAGCGCAGCGATAGCCGAGTGGAGTTGGCGAAGGCAGAGCGAAGTTACACTCTGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCCGCGAGTCTTGAAGAAGCCCGGAGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGAGATATCCATAGTTTTAATTTGTGATCTTGATAAATAATAAAGGAACTATATCTGTCCTCTAGACCATGACATCATTTGATCGTTTTGTGGGATTGAATTGTCGGTATATTATAGCCAAAGCAATCCAAGATCTTTGGTTCGATTTACTCTTAACCATTAAGCCTAAATGTGGTTGTCTACCCTATGCTTTGGTTCGAGATGGTGCTTCCCTTGGTTTCGATTGTTTTCATTCATGACTGCCATGTTTATAAGTTCAATACAGTATCAAACTTGGAAAGGGACAGTGTGGTCTCTATTGGTTTATATAGAGAGAGAGAAATGTAAAACGAAAACTATTGTCTTGATTGTGGTGTGTGAAGAATGCACAAAAACCATTTATTTGATTGGATTAAGTTAATTTTGAGTTTTCGAGAACAG

Coding sequence (CDS)

ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCCGCGAGTCTTGAAGAAGCCCGGAGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGA

Protein sequence

MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF*
Homology
[Close]
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match: Q9LHI0 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-49
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 0 

Query: 3   FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRSNF 122
            N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G KDQG+++F
Sbjct: 65  NNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGNKDQGKTDF 124

Query: 123 LKNFYKSNYF 133
           LKNFY SNYF
Sbjct: 125 LKNFYTSNYF 133

[Close]
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match: Q02366 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus OX=9913 GN=NDUFA6 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-09
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 11  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLD--ISVKQGRDKVREMFKKNAHITDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKMELEETIKVWKQRTHVM 104

[Close]
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match: Q9CQZ5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=10090 GN=Ndufa6 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-09
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 11  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDP 70
           P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP
Sbjct: 22  PIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLD--ITVKQGRDKVREMFMKNAHVTDP 81

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 82  RVVDLLVIKGKMELQETIKVWKQRTHVM 107

[Close]
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match: Q0MQA4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA6 PE=2 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0 

Query: 11  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKIELEETIKVWKQRTHVM 104

[Close]
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match: P56556 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens OX=9606 GN=NDUFA6 PE=1 SV=4)

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0 

Query: 11  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKIELEETIKVWKQRTHVM 104

[Close]
BLAST of CsGy5G027170 vs. NCBI nr
Match: XP_004142382.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus])

HSP 1 Score: 265 bits (677), Expect = 2.64e-89
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDFGAKDQGRS
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDFGAKDQGRS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. NCBI nr
Match: XP_008446979.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo])

HSP 1 Score: 258 bits (660), Expect = 1.03e-86
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYRSNYF 132

[Close]
BLAST of CsGy5G027170 vs. NCBI nr
Match: XP_038892169.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida])

HSP 1 Score: 256 bits (655), Expect = 5.99e-86
Identity = 127/132 (96.21%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD GAKDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDLGAKDQGIS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. NCBI nr
Match: KAE8648872.1 (hypothetical protein Csa_008170 [Cucumis sativus])

HSP 1 Score: 256 bits (655), Expect = 1.10e-85
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDFGAKDQGRS
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDFGAKDQGRS 120

Query: 121 NFLKNFYK 128
           NFLKNFYK
Sbjct: 121 NFLKNFYK 128

[Close]
BLAST of CsGy5G027170 vs. NCBI nr
Match: XP_023552714.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (648), Expect = 7.00e-85
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV T+SQ+RS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTISQIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match: A0A0A0KRV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G624440 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.28e-89
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDFGAKDQGRS
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDFGAKDQGRS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match: A0A1S3BH79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103489526 PE=3 SV=1)

HSP 1 Score: 258 bits (660), Expect = 5.01e-87
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYRSNYF 132

[Close]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match: A0A6J1H232 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111458871 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 5.63e-84
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIM+IYNLDDV T SQ+RS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match: A0A6J1JDJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111483420 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 1.14e-83
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIM+IYNLDDV T+S +RS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTISHIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match: A0A6J1CBT6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010212 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 1.09e-81
Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60
           MAFT R LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDVAT+SQLRS++AS+
Sbjct: 1   MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQ 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRS 120
           IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVG EGLVQD G KDQG S
Sbjct: 61  IRKNSHINDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGSEGLVQDLGTKDQGIS 120

Query: 121 NFLKNFYKSNYF 132
           NFLKNFYKSNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of CsGy5G027170 vs. TAIR 10
Match: AT3G12260.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-50
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 0 

Query: 3   FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGRSNF 122
            N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G KDQG+++F
Sbjct: 65  NNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGNKDQGKTDF 124

Query: 123 LKNFYKSNYF 133
           LKNFY SNYF
Sbjct: 125 LKNFYTSNYF 133

The following BLAST results are available for this feature:
BLAST of CsGy5G027170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LHI01.5e-4972.31NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thal... [more]
Q023663.4e-0935.23NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus OX=99... [more]
Q9CQZ53.4e-0938.64NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=... [more]
Q0MQA43.8e-0836.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla ... [more]
P565563.8e-0836.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens OX=... [more]
BLAST of CsGy5G027170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142382.12.64e-8999.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus][more]
XP_008446979.11.03e-8696.21PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis... [more]
XP_038892169.15.99e-8696.21NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida][more]
KAE8648872.11.10e-8599.22hypothetical protein Csa_008170 [Cucumis sativus][more]
XP_023552714.17.00e-8593.94NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo sub... [more]
BLAST of CsGy5G027170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRV01.28e-8999.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G624440 PE=3 SV=1[more]
A0A1S3BH795.01e-8796.21NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucumis melo OX=... [more]
A0A6J1H2325.63e-8493.18NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita moscha... [more]
A0A6J1JDJ21.14e-8392.42NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita maxima... [more]
A0A6J1CBT61.09e-8189.39NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Momordica charan... [more]
BLAST of CsGy5G027170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12260.11.1e-5072.31LYR family of Fe/S cluster biogenesis protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12964:SF4NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6-LIKEcoord: 1..132
NoneNo IPR availableCDDcd20266Complex1_LYR_NDUFA6_LYRM6coord: 17..93
e-value: 5.62487E-34
score: 111.501
IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6PANTHERPTHR12964NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNITcoord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G027170.2CsGy5G027170.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005747 mitochondrial respiratory chain complex I