CsGy5G026700 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G026700
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Nuclear receptor corepressor
Location	Gy14Chr5: 30508254 .. 30509152 (+)
RNA-Seq Expression	CsGy5G026700
Synteny	CsGy5G026700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCAGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTTAATCGGTGGGGTTCTGCTGACTTACGAAGGCCTACTGGTGAGTTTTGATGTTACTTTACTGTTTCCTCCGTTTCAACTTCTTAGATCCTTGGGCGTCTTAGCTGGTTTATTACAATCGCATTTATTTTTAATAATCTTGAGTTTTTGGCCCGGCTTTCTTTGAAGCTTTGGATGATAAAAGGATTTCGGGTTTCATTCCTGCTGAGATTTTGGGCCGTCCTCAAAACCTGCCTGCATACTTTTTGTCTTCTGATATTGATACTCTTTGCTGTCCTTTTTTCCTGAAGGTCATGGTAAGCAGGGTGGTTGGCATCAGTTTTCTGAAGACTCTAGTCACGGTTATGGACCTTCTCGGTCATTCAGTGACAGGGTGATAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGTGATGGAAAGTATATTAGAATCGGTAGAGAAAGTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCAAGAGATGCTAACAATGGATTTGGGAACCCTTCACGAAGAACGTCATCGCAGGATGTGAGTTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCGTTTCATGGGTTAGAAAATGGCCCGAGGTCTGATGTGGAAGTTTCCCTTGGCTCCACTGATTGGAAGCCGCTTAAGTGGTCCAGATCTGGGAGTTTGTCTTCTCGGGGATCTGCTTACAGCAGTTCAACAAACTCGAAGAATGAAAAGGCCGATTTACCTCTTAGAGTTGCATCTCCTATAG

mRNA sequence

ATGCCGCCAGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTTAATCGGTGGGGTTCTGCTGACTTACGAAGGCCTACTGGTCATGGTAAGCAGGGTGGTTGGCATCAGTTTTCTGAAGACTCTAGTCACGGTTATGGACCTTCTCGGTCATTCAGTGACAGGGTGATAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGTGATGGAAAGTATATTAGAATCGGTAGAGAAAGTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCAAGAGATGCTAACAATGGATTTGGGAACCCTTCACGAAGAACGTCATCGCAGGATGTGAGTTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCGTTTCATGGGTTAGAAAATGGCCCGAGGTCTGATGTGGAAGTTTCCCTTGGCTCCACTGATTGGAAGCCGCTTAAGTGGTCCAGATCTGGGAGTTTGTCTTCTCGGGGATCTGCTTACAGCAGTTCAACAAACTCGAAGAATGAAAAGGCCGATTTACCTCTTAGAGTTGCATCTCCTATAG

Coding sequence (CDS)

ATGCCGCCAGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTTAATCGGTGGGGTTCTGCTGACTTACGAAGGCCTACTGGTCATGGTAAGCAGGGTGGTTGGCATCAGTTTTCTGAAGACTCTAGTCACGGTTATGGACCTTCTCGGTCATTCAGTGACAGGGTGATAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGTGATGGAAAGTATATTAGAATCGGTAGAGAAAGTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCAAGAGATGCTAACAATGGATTTGGGAACCCTTCACGAAGAACGTCATCGCAGGATGTGAGTTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCGTTTCATGGGTTAGAAAATGGCCCGAGGTCTGATGTGGAAGTTTCCCTTGGCTCCACTGATTGGAAGCCGCTTAAGTGGTCCAGATCTGGGAGTTTGTCTTCTCGGGGATCTGCTTACAGCAGTTCAACAAACTCGAAGAATGAAAAGGCCGATTTACCTCTTAGAGTTGCATCTCCTATAG

Protein sequence

MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGGWHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSRDANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPIX

Homology

[Close]

BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_004142488.1 (uncharacterized protein LOC101222167 [Cucumis sativus] >KGN52286.1 hypothetical protein Csa_008147 [Cucumis sativus])

HSP 1 Score: 435 bits (1119), Expect = 1.00e-138
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_008446909.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 [Cucumis melo])

HSP 1 Score: 431 bits (1109), Expect = 2.60e-137
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           D NNGFGNPSRR SSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DTNNGFGNPSRRPSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. NCBI nr
Match: KAA0034735.1 (Myb_DNA-binding domain-containing protein [Cucumis melo var. makuwa] >TYK09288.1 Myb_DNA-binding domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 431 bits (1109), Expect = 2.63e-137
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           D NNGFGNPSRR SSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DTNNGFGNPSRRPSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_038892245.1 (uncharacterized protein LOC120081444 [Benincasa hispida])

HSP 1 Score: 415 bits (1067), Expect = 2.89e-131
Identity = 206/216 (95.37%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSE+SSHGYGPSRSFSDRV+EDESFRPSV RGDGKYIRIGRESRGSFSHRDWR HSR
Sbjct: 61  WHQFSEESSHGYGPSRSFSDRVLEDESFRPSVARGDGKYIRIGRESRGSFSHRDWRGHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           + NNGFGN SRR SSQDVSSDQRSVDDTVTYSSPQS HGLENGPRSDVEV LGSTDWKPL
Sbjct: 121 ETNNGFGNSSRRLSSQDVSSDQRSVDDTVTYSSPQSVHGLENGPRSDVEVPLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. NCBI nr
Match: KAG6573827.1 (hypothetical protein SDJN03_27714, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374 bits (961), Expect = 2.76e-123
Identity = 194/236 (82.20%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSA RWRDSYHGSREFNRWGSAD RRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAPRWRDSYHGSREFNRWGSADFRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSE++SHGYGPSRSFSDRV+E+ESFRPSVPRGDGKYIRIGRESRGS S+RDWRS+SR
Sbjct: 61  WHQFSEEASHGYGPSRSFSDRVVENESFRPSVPRGDGKYIRIGRESRGSSSYRDWRSYSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQS--------FH------------GL 180
           +  NGFGNPSRR SSQDVSSDQRSVDDT T+SSPQS         H            G 
Sbjct: 121 ETTNGFGNPSRRPSSQDVSSDQRSVDDTATHSSPQSDVVSVSDQIHSKDRNDKVGGACGS 180

Query: 181 ENGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           ENG RSDVEVSLGSTDWKPLKWSRSGSLSSR SAYS STNSKNEKADLPLRV+S I
Sbjct: 181 ENGLRSDVEVSLGSTDWKPLKWSRSGSLSSRASAYSGSTNSKNEKADLPLRVSSLI 236

[Close]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL
Match: A0A0A0KWU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623500 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 4.85e-139
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL
Match: A0A1S3BG74 (LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 OS=Cucumis melo OX=3656 GN=LOC103489481 PE=4 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 1.26e-137
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           D NNGFGNPSRR SSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DTNNGFGNPSRRPSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL
Match: A0A5A7SZU1 (Myb_DNA-binding domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002830 PE=4 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 1.27e-137
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180
           D NNGFGNPSRR SSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL
Sbjct: 121 DTNNGFGNPSRRPSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSTDWKPL 180

Query: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI
Sbjct: 181 KWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216

[Close]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL
Match: A0A6J1CFA1 (uncharacterized protein LOC111010219 OS=Momordica charantia OX=3673 GN=LOC111010219 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 6.99e-120
Identity = 196/236 (83.05%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEA+GSAARWRDSYHGSREFNRWGS+D RRPT HGKQGG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEALGSAARWRDSYHGSREFNRWGSSDFRRPTSHGKQGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSEDSSHGYGPSRSFSD+++EDESFRPSVPRG+GKYIRIGRESRGSFSHRDWRSHSR
Sbjct: 61  WHQFSEDSSHGYGPSRSFSDKMLEDESFRPSVPRGEGKYIRIGRESRGSFSHRDWRSHSR 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQS--------FH------------GL 180
           + NN F NPSRR S QDVSSDQRSVDDTVTYSSPQS         H            GL
Sbjct: 121 ETNNEFTNPSRRPS-QDVSSDQRSVDDTVTYSSPQSDIMNASDQIHSKDRNEKVGGVCGL 180

Query: 181 ENGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
           ENGPRSDVE+SL ST+WKPLKWSRSGSLSSRGSAYSSSTN+KNEKADLPLR+ASPI
Sbjct: 181 ENGPRSDVEISLSSTEWKPLKWSRSGSLSSRGSAYSSSTNAKNEKADLPLRIASPI 235

[Close]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL
Match: A0A6J1JPM1 (uncharacterized protein LOC111486582 OS=Cucurbita maxima OX=3661 GN=LOC111486582 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 3.03e-118
Identity = 193/236 (81.78%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTGHGKQGG 60
           MPPEPLPWDRKDLFKERKHEKSEAIGSA RWRDSYHGSREFNRWGSAD RRPTGHGK GG
Sbjct: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSATRWRDSYHGSREFNRWGSADFRRPTGHGKLGG 60

Query: 61  WHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSR 120
           WHQFSE++SHGYGPSRSFSDRV+EDESFRPSVPRGDGKY RIGRESRGSFS RDWRSHS+
Sbjct: 61  WHQFSEETSHGYGPSRSFSDRVLEDESFRPSVPRGDGKYNRIGRESRGSFSQRDWRSHSK 120

Query: 121 DANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQS--------------------FHGL 180
           + +  FGNPSRR SSQD SSDQRS+DDTVTYSSPQS                     +GL
Sbjct: 121 ENSKEFGNPSRRPSSQDASSDQRSLDDTVTYSSPQSDFVSVSDKIHSKDRNDKVGGVYGL 180

Query: 181 ENGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPI 216
            NGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEK DLP RVASP+
Sbjct: 181 GNGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKTDLPRRVASPL 236

[Close]

BLAST of CsGy5G026700 vs. TAIR 10
Match: AT3G52250.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22
Identity = 67/159 (42.14%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 1   MPPEPLPWDRKDLFKERKHEKSEAIGSAA--RWRD---SYHGSREF-NRWGSADLRRPTG 60
           MP +   WDRK+L ++RKH++ E    +   RWRD   S+H  REF +R GS D RRP+ 
Sbjct: 1   MPQDHASWDRKELLRQRKHDRPEQSFESPPFRWRDSPSSHHVPREFSSRLGSGDFRRPSC 60

Query: 61  HGKQGGWHQFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRD 120
           HGKQGG HQF E++SHGY  SRS S R+   +++RPS  RGD +Y R  R+ R S S ++
Sbjct: 61  HGKQGGRHQFVEETSHGYTSSRS-SARMF--DNYRPSASRGDWRYTRNCRDDRVSVSQKE 120

Query: 121 WRSHSRDANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSS 154
           W+ ++ + +NG      R     + + +RSVD+   ++S
Sbjct: 121 WKCNTWEMSNGSSRSFERPFG--IRNGRRSVDERPLHAS 154

The following BLAST results are available for this feature:

BLAST of CsGy5G026700 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G026700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142488.1	1.00e-138	100.00	uncharacterized protein LOC101222167 [Cucumis sativus] >KGN52286.1 hypothetical ...	[more]
XP_008446909.2	2.60e-137	99.07	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 [Cucumis me...	[more]
KAA0034735.1	2.63e-137	99.07	Myb_DNA-binding domain-containing protein [Cucumis melo var. makuwa] >TYK09288.1...	[more]
XP_038892245.1	2.89e-131	95.37	uncharacterized protein LOC120081444 [Benincasa hispida]	[more]
KAG6573827.1	2.76e-123	82.20	hypothetical protein SDJN03_27714, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy5G026700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWU7	4.85e-139	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623500 PE=4 SV=1	[more]
A0A1S3BG74	1.26e-137	99.07	LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 OS=Cucumis melo OX=365...	[more]
A0A5A7SZU1	1.27e-137	99.07	Myb_DNA-binding domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1CFA1	6.99e-120	83.05	uncharacterized protein LOC111010219 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1JPM1	3.03e-118	81.78	uncharacterized protein LOC111486582 OS=Cucurbita maxima OX=3661 GN=LOC111486582...	[more]

BLAST of CsGy5G026700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52250.1	4.5e-22	42.14	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..120
None	No IPR available	PANTHER	PTHR47340:SF1	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 1..205
None	No IPR available	PANTHER	PTHR47340	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G026700.2	CsGy5G026700.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding