CsGy5G026320 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G026320
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGlycine-rich RNA-binding protein RZ1C-like isoform X1
LocationGy14Chr5: 30259668 .. 30265298 (-)
RNA-Seq ExpressionCsGy5G026320
SyntenyCsGy5G026320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAATAGGGTGTGTAGTTAGAAATTTATTTTCTAGGGTTCGGGAGGAATCTTTATAAACGAGTGGAACTCATTCTTTTACAACATTTCACTGTAACCGAACAAATTAGGTATCGCCCTTTCTCCACTCTCATCACTTTCTTCAAATTCTCACTATCATTTGTTCTTTACGGTAGCAAATTTACTGGGTGCTTTTCGTTTTCGCCGATTTTTTTTTCTAAAATTTTGCTTCTATTTCTCAAATTACCTTTTGGGTTTTTGCTGTGCAGGAGGATATTTTCCCCCCGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGCGGTTTGTCATGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGGTTACCCTTATTTATATATATTCGTTGATTTGTAGTTTGATCTTTATTGAATGCATTGGACTTTGTCTAAACTGAACACATGGGAATAAGTTGTTCATTTTTATCTTATAGGTGAAGGAAATAGAGGAAATTGTAAAATGGGTGTCATTCCGTGCTAATGTTCATATGAAGAATATAATTTGTAAATTTACACCCCTTTTCCAAAAACACTGCAGATGAACTGCAAGATTAACTTTTACCGTCTGAAGCCATTATTTTTTTGTTTTGTTTTGTTTTCTCAGTATTGTTTTATGATTACCATAATTTTTTCTTCTCCATCCTCCTCTTCCTGATGACGTTTCTTTTTCCCTTGTGAATGAGGACGCTGTTAATGAAATTTTTGGGAAGCGGTTTCACTATCCATGTAAAGTTGAATGCATCAAGATGCTGAAGGTCATAGGGTTGTTTGCGCTTAAGTATAATTTGATTTAGATCTGCTGGTTAAGAAAATGTGCTACCATCTGGATATTGGGAATATGGTTGCCTGCTAACTCACTCAATCTTGTGGTCTAGCTGATTGGGGTTTGGTAGGATTTTAATATGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCTTGATTTAAACCAGAGGAACTATTAACAAGTGATGTGCTGATGCCTGCTCGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTTGATGAGGAAACTGAAGCCACTAAAATGTTTCAGGATCCGACTAATAAATGTTCTAGTATTTTCATGGGGAATTTTATCTTGCTCTGGATGATTATTAAGCCCAACTTATTTTTGGGTTACCCTTCTTATCAATGGTACAGCCAAAAGTTAATGAAGAAGTTTATGTGGTTTACGAGATGTTGCGTGGGGCAGAAAGTCTGGGCTAGATTGCTATATTGACTCAGATAATGAGTTTGCTAAGTCAAATAATCTCAGAAAGTTTTCAGAAGCCATATCTCATAGATGGAATGTTTTGTTGTACGAAGTACTGTCTGCCTCTTTGTAATTCTTTCTTCGCGTTCCTGTTCGTGACTAATTACTATTCAAGTGAGAGATAGCTGGTTTCTCATTTGCTAGTTTCACTGGAGTTGAGAGTTGTCAGTTTGATTTAAGATGAAGAAGAAAATGTAGCAGTGGTGCATGTGTTATGGCTAAGATTTATGATAGCATGCAAAGGTACAGTTTTGGGACATCAATAACCATTTCATTCTTTTGAGTGGACACTGCATCTTTGAATTTCATTTTTCTGTGATGAAGTTGCCAGAGTACCCTACATTTCCGAGCATGCTCAGAAAGTTATTTGTACTGGTTTCTGTTTAGCAGCTTATGTGGCTAGAAATTGTACTAGTGATGCCAGGCTTAGCAGCTCAGACATTTTCTGAAGAATCGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGGATCCTCCTTGTATGATGTCAGCTGAATTTTAAATGTCTGCTTGAGAACCTTTTCTGATCAGTTGTTATCTTTGTTGGTGAGCTTGTTAAGTAATGTGTGATGGACCGGACCCTGGACAATGATGTCGATATTATTGCCATCTAAAAGTTCCAGAGTTCTTAGGCCCTCAGTTTTCTGTTATGTCCGAGCATTATGAATGTCTATTTGTCGGGTATAGTACTGCAGTCTGCAAGAGAGCAATTGGATCTGAAGCTAAATTTGAGTTCCGTAGGTGCAGTGGCAGTTCCTATTTAGAGGAATGGGTTTAGGTTGTGGCAACGTGAGAAATTATGGAGCTGTAGTTTTTCATTCCTTTGTTTGCATCCTTTTCCTGTTGTTTGGAGTCGTTTCTCAAGATTTGCCAAGAATGCTGCTGTTCTGTTTTCCTTTTCTGTGGTGTTGATGTGCTAGTTTACTCATTTTATACTCATTGACAGTCTTTGTCTTAGCAAAGTTTGAATTCATCGATTTTTGAATCTATTTAAACTTAAGAGGGGTTGAATATGAATATGTGCCTAGTTAAGTATGGTTGCCACGCAAGAAGTTTTGTTGTTGTCAAATTTTCTAATACAGCCTCTTGTCCACGAATTCTGTGGTTGCTATGCAAGTTGGTCATCAAGTTTTCTAGTACAGCCTCTTGTGTCCACAAGCTGATGGGATCTCTATTGCAGAATAAGTTGGCATCTCAATTGCCTGAAATTTTGCTGTGTCTTCTTGCCTGCGTTTCCTTGACCATTCATCCTGGAAGATATGTTGTTCAAGGATTCATCTTTCTTTTTTGAGATTTATTCCACCATCTACTTCACATCACGTCCCAATATGATCATTTGACAACAACATTGAGGTTAACAAATCACCTAGTTGGAGTAATACACAAATCAAATGAAGTGTTTGTAGTGGGCTTTTTTTTTAGTTAAGATTGACTTTGAGTACCATTTTCGGATGGCTGACTGCTCAGAAGAAGGCCATGTAGCCATGTTTTTATGGCATTGTTTCTTTTGAATAAAAGGCGACTAGAGATGTAAGATACTCTCACTTCAGAAGATAGACCTAAAGATGTGCAGGTGCTTTTGTTTTGTTAAGGAATTATGTAACATGTTGCCATGAGTTCATAAACGGAAGAAAAAGTAAGTTGTCAGACTTTTAAAAACATTTTTATGGTGTTATTATCAATTACTTTGAACGAGTTCTCTTTGATGTTGTACTCTTTTTTATTGTGTATACAGCATGTGATAGGCTAAACTTCATCACCTGCTTGTACCCATAACTTATTCTGTTATTCTGCTTCTCTAATGGAGTGTAGGTTTGTTAACCATGTGTCCTGAATGATAATTTGATGGAGTTTTAACCTCTATTTTTAGTAGTTGTTGGAGTTTGAAATCTCTAGATTATGGTAACTGTTTGGTATTGAATCTATATCTATAACTTGCAACTTTGTCACAATTCTACTTATGGGCTTCAAGCCCAATATTGGGTATAGTTTTCCATGCTTTTAGATTAACCTTATGACCACTCCAAATTTTTATGGGCTATGAACTGGGATCTTAAGTACCACACCTTATATTGGTGGTCAGGTTGTAGAGTTTATCTTGAAGCCTGTCATCTTTCAACATTGAGGAGGTGGGATCTCTGGGCTATTTGTTTATCTTTAACTGTGGTGGTCTTCGTCCCTGTTTCTTTGATGCTAGTTTTTGTTACATTGGACAAATTCACTTTATAATCTAGGGTTAGACTATAGTGATGGCTAGCAGGTTTCTAGTTTTCACTTAGTATACCTTATTAGCGTGGGATGTACTTTAGTAGCTCTGTTCTAATGACTTCATTTAAGTTTTATTGGCTATTCAATTGATTTTCTCTTTGGCATTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGCGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGACGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCGACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGTGGGGATCGCTTTGCTGGAGATGCTAATCGTTATGTGGATGATCGTTATGATGGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGCAGGGACAACAAATATGGCAGTCGTGATCGCTATGTTAGTGATAGGTACTGACTGATTTTTTTCTGTGGATTTTTAGGGTATTATTTGTTCGTTTAAAGTAATTATGACTAGGAAATAATAATTGGCAGAATAACGATCCAATATTATATTGTTCTTTTTGTTGATTAATTGATGGCTGCTCAATTGTTTTCGTTGCAGCATATCATGTAGTTAACCAATCTCATTCCTGATTTTTTGCATAAATCTGGCAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATACTAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGACAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAACCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTTATTGTTAACACATTATCAGATTTATCAAAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGCAGTACCGATGCCTGACTGAGACAGATTGTTCCTGTGTTGTGTAGTTTTAACTAGAGTTTTTTTGCTCAGAGAGACAGATAAATGCTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTTCTAAAATGAGGCAAATCTCGAACGGAAGGGACTCTTAAGGCTTTGATTCATAGTTCATAAACAAATTAGCAAAGATACAACTAGAGAGGCCAGTAGCACCATATTCGTGTATTGAGCAGAGGTATGATGATGGACGAAGAAAATATGAGACAAAGCTGGAAAATTGGCTTCCCAAAGAACGAACTCTACGGCTGTTGGGAAGAAATATTGGTTTGGGCTTCAATTGGAATTACTTTTTTTTTGCTTTCTCCCTTTCTTTTTTCTGAACGTTTCTTCCGATTTTATGTTACTGATTCTCTTGAACTTTAGGAAAATGAGAAAGGAAAATGGGCACATTTTGAGTGCTCGATTCTATATTTCTTCCACCAACGTGTTTTTCTCCTTTTAATTCAATAATAGATTTTTCATCCTAGAGATCCTAGAGATGCGAGGTTTAGTGAAACTATAAATTCAATTGACTTGTCCAAGTGTTTTCGACAGATCATGAGCATGCCAATCACCGTCTTCACTTCTTATTCAATCTTCATACCTATGAAATTTTATCTTCACCTCTTGAAAAGTTTTCATACCTATGAAAAAATTTGTCTTCAACCAAAGAGAATAAACAGAATTAATTATAGCATTTTCAATCAAGTTTCATTTATAATATTTTATTACAAAT

mRNA sequence

AATAAATAGGGTGTGTAGTTAGAAATTTATTTTCTAGGGTTCGGGAGGAATCTTTATAAACGAGTGGAACTCATTCTTTTACAACATTTCACTGTAACCGAACAAATTAGGAGGATATTTTCCCCCCGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGCGGTTTGTCATGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGCGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGACGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCGACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGTGGGGATCGCTTTGCTGGAGATGCTAATCGTTATGTGGATGATCGTTATGATGGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGCAGGGACAACAAATATGGCAGTCGTGATCGCTATGTTAGTGATAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATACTAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGACAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAACCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTTATTGTTAACACATTATCAGATTTATCAAAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGCAGTACCGATGCCTGACTGAGACAGATTGTTCCTGTGTTGTGTAGTTTTAACTAGAGTTTTTTTGCTCAGAGAGACAGATAAATGCTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTTCTAAAATGAGGCAAATCTCGAACGGAAGGGACTCTTAAGGCTTTGATTCATAGTTCATAAACAAATTAGCAAAGATACAACTAGAGAGGCCAGTAGCACCATATTCGTGTATTGAGCAGAGGTATGATGATGGACGAAGAAAATATGAGACAAAGCTGGAAAATTGGCTTCCCAAAGAACGAACTCTACGGCTGTTGGGAAGAAATATTGGTTTGGGCTTCAATTGGAATTACTTTTTTTTTGCTTTCTCCCTTTCTTTTTTCTGAACGTTTCTTCCGATTTTATGTTACTGATTCTCTTGAACTTTAGGAAAATGAGAAAGGAAAATGGGCACATTTTGAGTGCTCGATTCTATATTTCTTCCACCAACGTGTTTTTCTCCTTTTAATTCAATAATAGATTTTTCATCCTAGAGATCCTAGAGATGCGAGGTTTAGTGAAACTATAAATTCAATTGACTTGTCCAAGTGTTTTCGACAGATCATGAGCATGCCAATCACCGTCTTCACTTCTTATTCAATCTTCATACCTATGAAATTTTATCTTCACCTCTTGAAAAGTTTTCATACCTATGAAAAAATTTGTCTTCAACCAAAGAGAATAAACAGAATTAATTATAGCATTTTCAATCAAGTTTCATTTATAATATTTTATTACAAAT

Coding sequence (CDS)

ATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGCGGTTTGTCATGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGCGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGACGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCGACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGTGGGGATCGCTTTGCTGGAGATGCTAATCGTTATGTGGATGATCGTTATGATGGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGCAGGGACAACAAATATGGCAGTCGTGATCGCTATGTTAGTGATAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATACTAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGACAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAACCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY*
Homology
[Close]
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.8e-79
Identity = 177/313 (56.55%), Postives = 213/313 (68.05%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGD 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGG 
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 ANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYTNDSDR 240
             RY+DDRYDG  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPNRGG- 287
           +P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RP+R G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 160/300 (53.33%), Postives = 196/300 (65.33%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQD 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+            +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT------------ED 127

Query: 123 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DA 182
           ECFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + 
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREF 187

Query: 183 NRYVDDRYD-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRF 242
           +RY+D R D  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPNR-GGRPSSFDRY 287
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRP+R GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33
Identity = 112/295 (37.97%), Postives = 158/295 (53.56%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGD 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY        GG GGGD
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDRDRSRPSGGRGGGD 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDD 180
                  CFKCG+ GH+AR+CPS                   +S R              
Sbjct: 121 -------CFKCGKPGHFARECPS-------------------ESSR-------------- 180

Query: 181 RYDGGGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS--SRYTNDSDRFPVNG 240
             DGGGRF  + DR+  SS+D++YG++D    DRY    DR+G+   RY++  DR+    
Sbjct: 181 --DGGGRFSSKDDRY--SSKDDRYGAKD----DRYGAKEDRYGAKDDRYSSKDDRYSSK- 240

Query: 241 YGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPNRGG 279
              DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Sbjct: 241 --DDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGAPGGERHSRAPYDRPRAGG 243

[Close]
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 0 

Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +R LE AF+++G+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYR--GGGYSTGGRGSYGGGGGGDRSARQDEC 125
             M+GQ+   R I+VN+A+ + G     G R  GGGY +GG G YGGGGGG     ++  
Sbjct: 67  EGMNGQDLDGRSITVNEAQSR-GSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGG 126

Query: 126 FKCGRLGHWARDCPSVGGGRGRGG 148
           +  G  G+ +R     GGG G GG
Sbjct: 127 YSGGGGGYSSRG----GGGGGYGG 145

[Close]
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 76/179 (42.46%), Postives = 96/179 (53.63%), Query Frame = 0 

Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   + +LE  F++FG++IDS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQDECFK 125
            EM+G+E   R I+VN+A+ + G     G  GGGY   G G YGGGGGG    R    + 
Sbjct: 65  DEMNGKELDGRTITVNEAQSR-GGGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRGGGGYG 124

Query: 126 CGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGGGRFG 185
            G  G       S GGG G GG         G  D G    GD        Y GG   G
Sbjct: 125 SGGGGRGGGGYGSGGGGYGGGG---------GRRDGGGYGGGDGG------YGGGSGGG 167

[Close]
BLAST of CsGy5G026320 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus])

HSP 1 Score: 588 bits (1517), Expect = 2.84e-212
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286

[Close]
BLAST of CsGy5G026320 vs. NCBI nr
Match: KAE8648851.1 (hypothetical protein Csa_008374 [Cucumis sativus])

HSP 1 Score: 588 bits (1517), Expect = 8.61e-206
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 424 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 483

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ
Sbjct: 484 MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 543

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG
Sbjct: 544 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 603

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY
Sbjct: 604 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 663

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY
Sbjct: 664 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 709

[Close]
BLAST of CsGy5G026320 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 572 bits (1473), Expect = 1.51e-205
Identity = 279/287 (97.21%), Postives = 284/287 (98.95%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGG-DRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGG DRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDG 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR+RLGDSDRGDRFAGD NRYVDDRY+G
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           YRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 287

[Close]
BLAST of CsGy5G026320 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 566 bits (1459), Expect = 1.84e-203
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CsGy5G026320 vs. NCBI nr
Match: XP_022956605.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 520 bits (1339), Expect = 2.15e-185
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 8.90e-204
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 8.90e-204
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 1.04e-185
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 520 bits (1338), Expect = 1.48e-185
Identity = 255/286 (89.16%), Postives = 265/286 (92.66%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFP+NGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 517 bits (1331), Expect = 5.00e-184
Identity = 264/302 (87.42%), Postives = 270/302 (89.40%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG   GGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGSS Y NDSDRFPVNGYGKDRGYY
Sbjct: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDG----------------GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFD 286
           RDG                GPRG+DKYGSGGPARDEGRSYRNRPAPYDRP+R GRPSSFD
Sbjct: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299

[Close]
BLAST of CsGy5G026320 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-80
Identity = 177/313 (56.55%), Postives = 213/313 (68.05%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGD 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGG 
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 ANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYTNDSDR 240
             RY+DDRYDG  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPNRGG- 287
           +P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RP+R G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of CsGy5G026320 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 271.6 bits (693), Expect = 7.5e-73
Identity = 160/300 (53.33%), Postives = 196/300 (65.33%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQD 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+            +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT------------ED 127

Query: 123 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DA 182
           ECFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + 
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREF 187

Query: 183 NRYVDDRYD-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRF 242
           +RY+D R D  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPNR-GGRPSSFDRY 287
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRP+R GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CsGy5G026320 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 271.6 bits (693), Expect = 7.5e-73
Identity = 160/300 (53.33%), Postives = 196/300 (65.33%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQD 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+            +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT------------ED 127

Query: 123 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DA 182
           ECFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + 
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREF 187

Query: 183 NRYVDDRYD-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRF 242
           +RY+D R D  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPNR-GGRPSSFDRY 287
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRP+R GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CsGy5G026320 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 145.2 bits (365), Expect = 8.1e-35
Identity = 112/295 (37.97%), Postives = 158/295 (53.56%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGD 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY        GG GGGD
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDRDRSRPSGGRGGGD 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDD 180
                  CFKCG+ GH+AR+CPS                   +S R              
Sbjct: 121 -------CFKCGKPGHFARECPS-------------------ESSR-------------- 180

Query: 181 RYDGGGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS--SRYTNDSDRFPVNG 240
             DGGGRF  + DR+  SS+D++YG++D    DRY    DR+G+   RY++  DR+    
Sbjct: 181 --DGGGRFSSKDDRY--SSKDDRYGAKD----DRYGAKEDRYGAKDDRYSSKDDRYSSK- 240

Query: 241 YGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPNRGG 279
              DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Sbjct: 241 --DDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGAPGGERHSRAPYDRPRAGG 243

[Close]
BLAST of CsGy5G026320 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 109.4 bits (272), Expect = 4.9e-24
Identity = 73/181 (40.33%), Postives = 97/181 (53.59%), Query Frame = 0 

Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +  L+  F++FG +IDS+I+ ++ +GR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 66  REMHGQEFGERIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQDEC 125
            EM+G+E   R+I+VN+A+ +   G     G  GGGY +GG G Y GGGGG  S      
Sbjct: 65  EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSG----- 124

Query: 126 FKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGGGRF 185
              G  G + R     G G G GG  +    R    + G    GD   Y      GGG  
Sbjct: 125 ---GGGGGYERRSGGYGSGGGGGGRGYGGGGR---REGGGYGGGDGGSY------GGGGG 168

The following BLAST results are available for this feature:
BLAST of CsGy5G026320 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWN51.8e-7956.55Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE... [more]
O227031.1e-7153.33Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE... [more]
Q9LIN31.1e-3337.97Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE... [more]
P493101.6e-2446.53Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1[more]
Q059662.4e-2342.46Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1[more]
BLAST of CsGy5G026320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142412.12.84e-212100.00glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869... [more]
KAE8648851.18.61e-206100.00hypothetical protein Csa_008374 [Cucumis sativus][more]
XP_038892830.11.51e-20597.21glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida][more]
XP_008446829.11.84e-20397.20PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] ... [more]
XP_022956605.12.15e-18589.51glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata][more]
BLAST of CsGy5G026320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BGN58.90e-20497.20glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3CG308.90e-20497.20Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw... [more]
A0A6J1GY861.04e-18589.51glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3... [more]
A0A6J1KMD71.48e-18589.16glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A6J1CFE75.00e-18487.42glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=... [more]
BLAST of CsGy5G026320 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04280.11.3e-8056.55RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.17.5e-7353.33RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.27.5e-7353.33RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT3G26420.18.1e-3537.97RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT4G39260.14.9e-2440.33cold, circadian rhythm, and RNA binding 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 122..138
e-value: 1.3E-5
score: 34.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 122..138
e-value: 2.3E-8
score: 33.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 123..138
score: 11.086722
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 8..81
e-value: 2.3E-28
score: 110.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..78
e-value: 4.8E-20
score: 71.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..85
score: 19.484827
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..117
e-value: 3.8E-31
score: 110.1
NoneNo IPR availableGENE3D4.10.60.10coord: 118..146
e-value: 1.4E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..286
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..247
NoneNo IPR availablePANTHERPTHR15241:SF294GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKEcoord: 1..247
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..115
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 103..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G026320.2CsGy5G026320.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding