CsGy5G025965 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G025965
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNA-directed RNA polymerase I subunit like
Location	Gy14Chr5: 29978734 .. 29980255 (+)
RNA-Seq Expression	CsGy5G025965
Synteny	CsGy5G025965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAATAACGCCCGGCGTTCTACAACGCACATTTACTACTAAGTTCCTACCCTCCCCATCTCTTCCCGTCTTGTTTCCATCGCCCGAAAACCATGTGTGCTGCGAACCGCTATAGATTTCGGGAACGTTTCGGACAAAATTGAACCAAAAATCAATACAACAATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGGTTTCCCCATCTTTCGCTTCAATCTCATCACCTTCTTCCCTCTTTCGTCCACTCTACAAATTTCCTATCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAGAAGTGCAACAACATTCTGTATAGTCCCTTCACTTTTATGCTTGATTAATTGGATTTCCATCGAAATTCCATGGCTTCGGTGAATAAATGTGTTTGTCTAGTGTTATGAGAAAGCAAAACTGCAAATACAGTAGGCTGTAGGTTTATGTTATGTCCTGAATTTTGGTACCCCTTAGTCGGAGCATATGCATTAACTAGTTGAGCTATCCGTCCCGTGCTGATTTTTAAGTTGTTAAATTAGGTAATTTTTGTACCACATTTTTGGAATGTCTAGTGACCAAGTCACTAAATTGATAAGTCGCAATTTCTAAAACGGACTATGTATTGTACCCGGTGGTAGACATTTTACTAGAGGTTTTTAATGTATCAACCCACCTTTGTTCAATTGCTGTTGAAGCCTATACTTGGATGAGTGGAGGGTAGACGATTTCAAAGTGGGCTTCTCTTCATTAGATATAGAAGATCTCCAAGAATTTGGATCTTAATATTGGCATTGGTCTGGACAAATGTTTATGTGGCACCATTCAAATTCTGCCTCCTTTTACTATTGCTAACAGTGTAACTGAGGCAGCCTTTTAAGGATTACTTGAAAACATGCTAAACGAAAGCCAACATGTAGAGAGACAGTTACCCAACTCTTTGGACAAAGAACTTCAGAGCAAAGCCAAATAAACCACCAAAGACTTCCTCTTCATTAATTTTTTTCCAGTTTTTCTCTTTTTAGACTTGCCAAGAGGTACTTAAAGCACGTTTGATTTCTTCTCAAACCAAAACTCACTGCCCGGTATGAGACATCTTTTATTAACTGAACTAGGAAAAGCCTCTTGGCTTCCAAAGGTCCTGAAAAGCTCCCGCCACAATTGAGAGGAGAAAG

mRNA sequence

TAAAAATAACGCCCGGCGTTCTACAACGCACATTTACTACTAAGTTCCTACCCTCCCCATCTCTTCCCGTCTTGTTTCCATCGCCCGAAAACCATGTGTGCTGCGAACCGCTATAGATTTCGGGAACGTTTCGGACAAAATTGAACCAAAAATCAATACAACAATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGGTTTCCCCATCTTTCGCTTCAATCTCATCACCTTCTTCCCTCTTTCGTCCACTCTACAAATTTCCTATCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAGAAGTGCAACAACATTCTGTATAGTCCCTTCACTTTTATGCTTGATTAATTGGATTTCCATCGAAATTCCATGGCTTCGGTGAATAAATGTGTTTGTCTAGTGTTATGAGAAAGCAAAACTGCAAATACAGTAGGCTGTAGGTTTATGTTATGTCCTGAATTTTGGTACCCCTTAGTCGGAGCATATGCATTAACTAGTTGAGCTATCCGTCCCGTGCTGATTTTTAAGTTGTTAAATTAGGTAATTTTTGTACCACATTTTTGGAATGTCTAGTGACCAAGTCACTAAATTGATAAGTCGCAATTTCTAAAACGGACTATGTATTGTACCCGGTGGTAGACATTTTACTAGAGGTTTTTAATGTATCAACCCACCTTTGTTCAATTGCTGTTGAAGCCTATACTTGGATGAGTGGAGGGTAGACGATTTCAAAGTGGGCTTCTCTTCATTAGATATAGAAGATCTCCAAGAATTTGGATCTTAATATTGGCATTGGTCTGGACAAATGTTTATGTGGCACCATTCAAATTCTGCCTCCTTTTACTATTGCTAACAGTGTAACTGAGGCAGCCTTTTAAGGATTACTTGAAAACATGCTAAACGAAAGCCAACATGTAGAGAGACAGTTACCCAACTCTTTGGACAAAGAACTTCAGAGCAAAGCCAAATAAACCACCAAAGACTTCCTCTTCATTAATTTTTTTCCAGTTTTTCTCTTTTTAGACTTGCCAAGAGGTACTTAAAGCACGTTTGATTTCTTCTCAAACCAAAACTCACTGCCCGGTATGAGACATCTTTTATTAACTGAACTAGGAAAAGCCTCTTGGCTTCCAAAGGTCCTGAAAAGCTCCCGCCACAATTGAGAGGAGAAAG

Coding sequence (CDS)

ATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGGTTTCCCCATCTTTCGCTTCAATCTCATCACCTTCTTCCCTCTTTCGTCCACTCTACAAATTTCCTATCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG

Protein sequence

MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL*

Homology

[Close]

BLAST of CsGy5G025965 vs. NCBI nr
Match: XP_011655841.1 (uncharacterized protein LOC105435592 [Cucumis sativus])

HSP 1 Score: 301 bits (771), Expect = 1.07e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK 60
           MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK 60

Query: 61  NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL 120
           NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL
Sbjct: 61  NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL 120

Query: 121 LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
Sbjct: 121 LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

[Close]

BLAST of CsGy5G025965 vs. NCBI nr
Match: KAA0034669.1 (uncharacterized protein E6C27_scaffold65G006880 [Cucumis melo var. makuwa] >TYK09220.1 uncharacterized protein E5676_scaffold475G002130 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (698), Expect = 1.60e-91
Identity = 149/164 (90.85%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFAS---ISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFA 60
           MLGFLTIPHQLK+SPS AS   ISSPSSLF PLYKFP+HHTF+NS+FLISS+ RRFTA A
Sbjct: 1   MLGFLTIPHQLKISPSLASLPSISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRFTASA 60

Query: 61  SNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120
           SNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL
Sbjct: 61  SNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120

Query: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. NCBI nr
Match: XP_008446780.1 (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo])

HSP 1 Score: 273 bits (698), Expect = 3.40e-91
Identity = 149/164 (90.85%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFAS---ISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFA 60
           MLGFLTIPHQLK+SPS AS   ISSPSSLF PLYKFP+HHTF+NS+FLISS+ RRFTA A
Sbjct: 23  MLGFLTIPHQLKISPSLASLPSISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRFTASA 82

Query: 61  SNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120
           SNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL
Sbjct: 83  SNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 142

Query: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 143 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

[Close]

BLAST of CsGy5G025965 vs. NCBI nr
Match: XP_023549272.1 (uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217 bits (553), Expect = 1.95e-69
Identity = 127/167 (76.05%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60
           MLGFLTIP+Q K+SPS +S SSP      SSL  PL+KFP+H+    S+  I    +RFT
Sbjct: 3   MLGFLTIPYQWKISPSLSSSSSPFSLSTRSSLSFPLFKFPLHY----SESQIPGKRKRFT 62

Query: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120
           A ASN +   GG+IKEREGERNGA GS NGGDDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 63  ALASNNDNGLGGNIKEREGERNGAKGS-NGGDDLRKERGPVFNIKWAELLIDPDPDNILA 122

Query: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. NCBI nr
Match: XP_022993576.1 (uncharacterized protein LOC111489528 [Cucurbita maxima])

HSP 1 Score: 210 bits (535), Expect = 1.07e-66
Identity = 124/167 (74.25%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60
           MLGFLTIP+Q K+SPS +S SSP      S L  PL+KFP+H+    S+  IS   +RF 
Sbjct: 3   MLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHY----SESQISGKRKRFA 62

Query: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120
           A ASN +   GG+IKEREGERNGA GS  G DDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 63  ALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNILA 122

Query: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL
Match: A0A0A0KRG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 5.20e-103
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK 60
           MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNK 60

Query: 61  NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL 120
           NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL
Sbjct: 61  NTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGL 120

Query: 121 LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
Sbjct: 121 LAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

[Close]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL
Match: A0A5D3CD16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002130 PE=4 SV=1)

HSP 1 Score: 273 bits (698), Expect = 7.76e-92
Identity = 149/164 (90.85%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFAS---ISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFA 60
           MLGFLTIPHQLK+SPS AS   ISSPSSLF PLYKFP+HHTF+NS+FLISS+ RRFTA A
Sbjct: 1   MLGFLTIPHQLKISPSLASLPSISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRFTASA 60

Query: 61  SNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120
           SNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL
Sbjct: 61  SNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120

Query: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL
Match: A0A1S3BFX0 (uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=4 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.64e-91
Identity = 149/164 (90.85%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFAS---ISSPSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFA 60
           MLGFLTIPHQLK+SPS AS   ISSPSSLF PLYKFP+HHTF+NS+FLISS+ RRFTA A
Sbjct: 23  MLGFLTIPHQLKISPSLASLPSISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRFTASA 82

Query: 61  SNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 120
           SNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL
Sbjct: 83  SNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVAL 142

Query: 121 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 143 TGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

[Close]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL
Match: A0A6J1JWP5 (uncharacterized protein LOC111489528 OS=Cucurbita maxima OX=3661 GN=LOC111489528 PE=4 SV=1)

HSP 1 Score: 210 bits (535), Expect = 5.19e-67
Identity = 124/167 (74.25%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60
           MLGFLTIP+Q K+SPS +S SSP      S L  PL+KFP+H+    S+  IS   +RF 
Sbjct: 3   MLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHY----SESQISGKRKRFA 62

Query: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120
           A ASN +   GG+IKEREGERNGA GS  G DDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 63  ALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNILA 122

Query: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL
Match: A0A6J1GYA2 (uncharacterized protein LOC111458579 OS=Cucurbita moschata OX=3662 GN=LOC111458579 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 2.11e-66
Identity = 124/167 (74.25%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60
           MLGFLTIP+Q K+SPS  S SSP      SSL   L+KFP+H+    S+  I    +RFT
Sbjct: 3   MLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHY----SESQIPGKRKRFT 62

Query: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120
           A ASN +   GG+IKEREGERNGA GS  G DDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 63  ALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNILA 122

Query: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]

BLAST of CsGy5G025965 vs. TAIR 10
Match: AT4G40045.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 9.6e-17
Identity = 66/139 (47.48%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 23  PSSLFRPLYKFPIHHTFYNSQFLISSDHRRFTAFASNKNTEFGGSIKEREGERNGANGSS 82
           P +  +P + + I H  ++ + L  S        A N N     S KE  G  N    ++
Sbjct: 9   PVTTLKPRFSYNIPHHHHHIR-LCKSPSLILRTNAQNGN----DSAKESSGGGN-RPVTN 68

Query: 83  NGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVA 142
           + G+  KK++   F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVA
Sbjct: 69  DDGNGSKKDQFAGFSFKWGELL-NPDQDNFVAVGLAGVLTWASLQVLSQLFFISFAILVA 128

Query: 143 ALKYSFIAALLLFILITLL 162
           ALKYSFIAALL+FIL+TLL
Sbjct: 129 ALKYSFIAALLIFILVTLL 140

The following BLAST results are available for this feature:

BLAST of CsGy5G025965 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G025965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655841.1	1.07e-102	100.00	uncharacterized protein LOC105435592 [Cucumis sativus]	[more]
KAA0034669.1	1.60e-91	90.85	uncharacterized protein E6C27_scaffold65G006880 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_008446780.1	3.40e-91	90.85	PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo]	[more]
XP_023549272.1	1.95e-69	76.05	uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo]	[more]
XP_022993576.1	1.07e-66	74.25	uncharacterized protein LOC111489528 [Cucurbita maxima]	[more]

BLAST of CsGy5G025965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRG8	5.20e-103	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1	[more]
A0A5D3CD16	7.76e-92	90.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BFX0	1.64e-91	90.85	uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=...	[more]
A0A6J1JWP5	5.19e-67	74.25	uncharacterized protein LOC111489528 OS=Cucurbita maxima OX=3661 GN=LOC111489528...	[more]
A0A6J1GYA2	2.11e-66	74.25	uncharacterized protein LOC111458579 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]

BLAST of CsGy5G025965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40045.1	9.6e-17	47.48	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..90
None	No IPR available	PANTHER	PTHR36789	TRANSMEMBRANE PROTEIN	coord: 23..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G025965.1	CsGy5G025965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane