CsGy5G025780 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGCAGTGGCAGAAATTGCTTTGGATGAGTATGTGGATCACAAAACTCTGTTAACACTGAATAATGAGAAGCCATTCCATTCGCCATTGTTGTCAGCTTCCTTACACCAACGATTCACCTCTAATCTTCACTACCTATCATAATTCTCTACCCTAAATTCCCATCTCCTCCATTCTGTTTCAGATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGGTATGTTTTCTCATGCCCATTCCGATTCCGTGTTGCTCTTCTCAATTTGTTCTTGTTTTGATTCTCTTCTGAATAGACCTTCAATTTTAGTTATACCCTTTTGGAATTTCGTATTCTTTTTTACAGCACAGTTCTTAAGGAACTCGTGGTTGATTTTGATTCGTTATGTTCTTCCGATTGTGACTAGCTGTGTGATGTTTGAGTTATACGAGAGAAAAGAGGAAAATGAAGCTTAAAAACTGTCATGTTAGGTAGTTTTGGTTTGCAAAACTAGATGCCAGATTAAAGTAGTTAGCAGAAGAGAAAATTAGTATTGGGACTTCGAAATAATCTGTACTTGAACTACTTCAAGGATTGATATGTTATATTATTATTGATCACCCAAGCTTAAACTGATTGAGTTACGATAAATTTAGTTAATAAATCCATATTCATAATATTTCCTGTCACTTGTGGGATTGGAAATTAGCACATGGTGAAACAAATAGTTATCAATATTAATGGCAGAAGAAACAACTTCATAAGTGTTTGAACTTAGAATATATAGCTAACCCAAAAATTAAAGTTGAGGGATTGTGGTAAAAACAAATTAATTATCAATGATTCTTGCCGGCGTTTGGCTATTTCTTTGCTCTCCTGTTTCAATTGGGAGCAGAGTGATAAACAAGAGAGAGAGCAGGGGAGGAGAGATTCAGTTATGTATAGAGAGTTCAAAATGGGCTCATAAGATAAAGAAGACGATAGCCATACCCTCAACTCACTGTACTAGATAGAATCATGAAGGTAATATGATCCTATAGGTATGATTAGATTAATTAGTATTTAGATCATGAATATTACAATATAAATATAGAAAAGAGAATTCAAATCCAAGATATGAGGCACTTATAAGTTAATAACTACTTTACTCAAGCAGTGATATGATATAGGTAGTTGTGGCAAAGGACATCAGAATGGTTTAGCCATAATTTGTACCTTAGCTATTTTTTTCTTTGAATTGTTTCTAGAAATATAAGCTTTTCTTCCGTTCATTATCTTGTTGTATTTCTTCCATCCATGATCTTGTTGTAGCCTGTATTTGTTAGCATAGCAAAATCTAATAAAACAGTGGAGTGATATATCACCTAGCTTTTGTGATTATAGTTGGAATCTATCATCTCTGTTCGGCATTACAGATAGCATCCTGCTCTTCATTATATATACGTACGTATATATGTATATGTATATATAGGCATGTATTATGTACGTATAAATGTATAAATGTTAACAAAAGGAGTAGATGTAACTTAAGTTGACTTGTGCAGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGGTTAGGTGCTCGCGGAGACATATAGACACTATACAAACATGGATACACGTTATTTTTAAGAAGTCTAGAACTCCGACACAGCAAGAGCGTGTGTATTAAAATTACATATCATTTTTATATCAAAAGGGGATTCAACATCAACAAGTTTATGCATTTATATGGTAAAAAAAGAGTTTGCTTAGACTTAACGAGTGCTTAGTATGTTTGTAATAAACGTTGGACTTGTATTTAATTAGCCCAATGTGCTAAAAGGTATCCTGTCTAATAAGTGTTGGAGTGATCAAGTCTCCGACATGTGTCGGACAAAGATGCTAGCCAAACTAGAGTGTCTTGCTTCTCAGGTGACTATAATATTTTTACTATCTTTTCTCTTCCAAACGAAAAGGGTCAGGCTTTGGTTCATTTGTTTCTTTCTGCTGTGTTTATTCATACTCAGTTTATGGCATCTGCTGAAATAGAAGTCTTTTTCTATCAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGAGTTAGTTTCTCTCATCCTCAATTCTCTTTCACTGATCACAAACCCATAGCTTTTGTCTCACTGAATTTGAATTGACCACGGCAGTTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTACATAGATTCTTAGATAATGTAAATTACAATAAGTACCCCAACTACTCATATCCTTTCAAAAGTTATCATATTATCATTGACTTTTCATATAGTTTTTGAAAACTGCTTTTGGACCTGAAACAGTGTAGCGGTAACTTCGAATAGAAATTAGGACTTGAACACCACCATATCTATTCTAGGTTATGATTCCCATCTTAAATTCCAACGGATTTCTATTCTAAGTGGTAGTTTTTCAATCTTAACGAAAGGTTAGGGGTAATATTACAACTTTTAAAATAACATGGAAAAAAATATCTAAGCTCCATATTTGGGACTCTTCAATGGTTGGATTACGAACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAATCAACAAAATTATTCTTTTTTTTTCCTTTTCTTTTTAATTTTTTTTGGTAGGGGCTTATTTGCAAATGATGTATAGCATAATTCTCCATTCTATTGCAATTTGCTCCTTCAACAATGTTAGCCCATCCTATGTAATATTACAACTTTTTAGTCCCAGAAGATAAATCTCTCTTTTTATACTATTAGGAGCTTAATGTGAATCCTTACCAAAAAGAATGTAAATTCCATAAAATTTTCAATTACCTCGTCGTCTTGGATGATTAGTACAAATTTGATCGATTTGGTGATACATCGGTTTGTTTTTAGTTTTTAAAATTTATGTGTGGTGTATCTTTTGAACGGTAAAATTTGTACAAAATCTCAGTGATCAATCTCAATCAACATGAATTGTGAAATATTGTTTGAACGGTTGTTTAAAAAATGATGCTAGTTTTGTAAAATGAAAATCCAACCA GAAGCAGTGGCAGAAATTGCTTTGGATGAGTATGTGGATCACAAAACTCTGTTAACACTGAATAATGAGAAGCCATTCCATTCGCCATTGTTGTCAGCTTCCTTACACCAACGATTCACCTCTAATCTTCACTACCTATCATAATTCTCTACCCTAAATTCCCATCTCCTCCATTCTGTTTCAGATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAATCAACAAAATTATTCTTTTTTTTTCCTTTTCTTTTTAATTTTTTTTGGTAGGGGCTTATTTGCAAATGATGTATAGCATAATTCTCCATTCTATTGCAATTTGCTCCTTCAACAATGTTAGCCCATCCTATGTAATATTACAACTTTTTAGTCCCAGAAGATAAATCTCTCTTTTTATACTATTAGGAGCTTAATGTGAATCCTTACCAAAAAGAATGTAAATTCCATAAAATTTTCAATTACCTCGTCGTCTTGGATGATTAGTACAAATTTGATCGATTTGGTGATACATCGGTTTGTTTTTAGTTTTTAAAATTTATGTGTGGTGTATCTTTTGAACGGTAAAATTTGTACAAAATCTCAGTGATCAATCTCAATCAACATGAATTGTGAAATATTGTTTGAACGGTTGTTTAAAAAATGATGCTAGTTTTGTAAAATGAAAATCCAACCA ATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAA MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD* Homology
BLAST of CsGy5G025780 vs. NCBI nr
Match: XP_004135038.1 (uncharacterized protein LOC101205552 [Cucumis sativus] >KGN52187.1 hypothetical protein Csa_009193 [Cucumis sativus]) HSP 1 Score: 385 bits (988), Expect = 1.07e-134 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsGy5G025780 vs. NCBI nr
Match: XP_008446754.1 (PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo] >KAA0034651.1 DUF2996 family protein [Cucumis melo var. makuwa] >TYK09202.1 DUF2996 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 366 bits (939), Expect = 3.28e-127 Identity = 186/195 (95.38%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of CsGy5G025780 vs. NCBI nr
Match: XP_038891519.1 (uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida]) HSP 1 Score: 365 bits (936), Expect = 9.08e-127 Identity = 181/194 (93.30%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsGy5G025780 vs. NCBI nr
Match: XP_022986445.1 (uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharacterized protein LOC111484155 [Cucurbita maxima]) HSP 1 Score: 339 bits (869), Expect = 1.43e-116 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsGy5G025780 vs. NCBI nr
Match: XP_022956513.1 (uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 uncharacterized protein LOC111800345 [Cucurbita pepo subsp. pepo] >KAG7032019.1 hypothetical protein SDJN02_06061 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 339 bits (869), Expect = 1.43e-116 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsGy5G025780 vs. ExPASy TrEMBL
Match: A0A0A0KUS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1) HSP 1 Score: 385 bits (988), Expect = 5.18e-135 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsGy5G025780 vs. ExPASy TrEMBL
Match: A0A5A7SZ21 (DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001950 PE=4 SV=1) HSP 1 Score: 366 bits (939), Expect = 1.59e-127 Identity = 186/195 (95.38%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of CsGy5G025780 vs. ExPASy TrEMBL
Match: A0A1S3BGH0 (uncharacterized protein LOC103489386 OS=Cucumis melo OX=3656 GN=LOC103489386 PE=4 SV=1) HSP 1 Score: 366 bits (939), Expect = 1.59e-127 Identity = 186/195 (95.38%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of CsGy5G025780 vs. ExPASy TrEMBL
Match: A0A6J1JE31 (uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155 PE=4 SV=1) HSP 1 Score: 339 bits (869), Expect = 6.94e-117 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsGy5G025780 vs. ExPASy TrEMBL
Match: A0A6J1GX25 (uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC111458230 PE=4 SV=1) HSP 1 Score: 339 bits (869), Expect = 6.94e-117 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsGy5G025780 vs. TAIR 10
Match: AT2G04039.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). ) HSP 1 Score: 168.7 bits (426), Expect = 4.6e-42 Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of CsGy5G025780 vs. TAIR 10
Match: AT2G04039.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). ) HSP 1 Score: 162.9 bits (411), Expect = 2.5e-40 Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 0
BLAST of CsGy5G025780 vs. TAIR 10
Match: AT2G04039.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 5.0e-20 Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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