CsGy5G025225 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G025225
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 29558985 .. 29559266 (+)
RNA-Seq ExpressionCsGy5G025225
SyntenyCsGy5G025225
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATTGCAAAAATGGAAACAAACCGGTTCAGTACCATAAACCGTCCTAAGAATTTGCAAAATGGCGCCGATAACATGACCCATCGCCCCAGACGTAACTCCCACCCTTTTTCCCGCGCGTGTACTCTACTCGCCTCCCATCAATTCACGACTGTCGGAGTTCTTTTTCACTGCTCTACCTCCGGCGACTGCATATTCTTCCTTTTTCTATCAGATCTCTCTCTCTCTCTCTCTTTCTCTTTTCAAATTTTCCACCGGTCGTTTTCACTAATCTGTTGA

mRNA sequence

ATGGTAATTGCAAAAATGGAAACAAACCGGTTCAGTACCATAAACCGTCCTAAGAATTTGCAAAATGGCGCCGATAACATGACCCATCGCCCCAGACGTAACTCCCACCCTTTTTCCCGCGCGTGTACTCTACTCGCCTCCCATCAATTCACGACTGTCGGAGTTCTTTTTCACTGCTCTACCTCCGGCGACTGCATATTCTTCCTTTTTCTATCAGATCTCTCTCTCTCTCTCTCTTTCTCTTTTCAAATTTTCCACCGGTCGTTTTCACTAATCTGTTGA

Coding sequence (CDS)

ATGGTAATTGCAAAAATGGAAACAAACCGGTTCAGTACCATAAACCGTCCTAAGAATTTGCAAAATGGCGCCGATAACATGACCCATCGCCCCAGACGTAACTCCCACCCTTTTTCCCGCGCGTGTACTCTACTCGCCTCCCATCAATTCACGACTGTCGGAGTTCTTTTTCACTGCTCTACCTCCGGCGACTGCATATTCTTCCTTTTTCTATCAGATCTCTCTCTCTCTCTCTCTTTCTCTTTTCAAATTTTCCACCGGTCGTTTTCACTAATCTGTTGA

Protein sequence

MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCSTSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC*
Homology
[Close]
BLAST of CsGy5G025225 vs. NCBI nr
Match: KGN52135.1 (hypothetical protein Csa_008134 [Cucumis sativus])

HSP 1 Score: 186 bits (473), Expect = 1.97e-59
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS 60
          MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS
Sbjct: 1  MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS 60

Query: 61 TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC 93
          TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC
Sbjct: 61 TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC 93

[Close]
BLAST of CsGy5G025225 vs. ExPASy TrEMBL
Match: A0A0A0KR87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611660 PE=4 SV=1)

HSP 1 Score: 186 bits (473), Expect = 9.54e-60
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS 60
          MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS
Sbjct: 1  MVIAKMETNRFSTINRPKNLQNGADNMTHRPRRNSHPFSRACTLLASHQFTTVGVLFHCS 60

Query: 61 TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC 93
          TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC
Sbjct: 61 TSGDCIFFLFLSDLSLSLSFSFQIFHRSFSLIC 93

The following BLAST results are available for this feature:
BLAST of CsGy5G025225 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G025225 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52135.11.97e-59100.00hypothetical protein Csa_008134 [Cucumis sativus][more]
BLAST of CsGy5G025225 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR879.54e-60100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611660 PE=4 SV=1[more]
BLAST of CsGy5G025225 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G025225.1CsGy5G025225.1mRNA